Data search


search
Exact
Search

Results for MligTC455_24399

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24399 435 9.06 Mlig455_062067

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.587

Mlig455_062067 {REF} {Length: 3174} {RNA1509_54646} {RNA1310_12048} {RNA815_7357}

Cumulative graph for MligTC455_24399

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.192 3.399 0.87764 1.00000
RegionR2 0.413 3.399 0.42958 0.81985
RegionR3 0.215 3.399 0.62059 1.00000
RegionR4 -0.005 3.399 0.99451 1.00000
RegionR5 -0.967 3.399 0.03830 0.15452
RegionR6 -0.267 3.399 0.58348 1.00000
RegionR7 -0.089 3.399 0.89061 1.00000
RegionR8 0.508 3.399 0.50372 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.082 3.399 0.95800 1.00000
RegenerationR2 0.694 3.399 0.08891 0.47745
RegenerationR3 -0.1 3.399 0.83526 0.99239
RegenerationR4 0.298 3.399 0.54652 0.89092
RegenerationR5 0.457 3.399 0.36303 0.77385
RegenerationR6 -0.646 3.399 0.26196 0.61214
RegenerationBL 0.217 3.399 0.71425 1.00000
RegenerationTP -0.084 3.399 0.90044 1.00000


Genes with expression patterns similar to MligTC455_24399

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24399 435 9.06 Mlig455_062067

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.587

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062067 {REF} {Length: 3174} {RNA1509_54646} {RNA1310_12048} {RNA815_7357}
2. MligTC455_18794 1049 21.85 Mlig455_007109

Neo: -

Age: -

WDR19 2.489 - - 0.750 - 0.980 0.759 Mlig455_007109 {REF} {Length: 5282} {Pfam: WD domain, G-beta repeat [PF15911.7, score=60.1]; Region in Clathrin and VPS [PF00637.22, score=47.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=38.2]; Tetratricopeptide repeat [PF13176.8, score=27.2]; Coatomer WD associated region [PF04053.16, score=26.6]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=25.0]; Tetratricopeptide repeat [PF14559.8, score=24.4]; Tetratricopeptide repeat [PF13428.8, score=23.7]; Tetratricopeptide repeat [PF00515.30, score=20.8]; IKI3 family [PF04762.14, score=16.9]} {Human: ENSG00000157796, WDR19, WD repeat domain 19, [RH, Score=1565, Expect=0.0]} {Mouse: ENSMUSG00000037890, Wdr19, WD repeat domain 19, [RH, Score=1580, Expect=0.0]} {Dmel: FBgn0034452, Oseg6, Outer segment 6, [RH, Score=1088, Expect=0.0]} {Celegans: WBGene00001118, dyf-2, WD repeat-containing protein dyf-2, [RH, Score=993, Expect=0.0]} {Smed: dd_Smed_v6_10987_0_1, dd_Smed_v6_10987_0_1, [RH, Score=1474, Expect=0.0]} {RNA1509_3691} {RNA1310_1826.1} {RNA815_509}
3. MligTC455_20645 255 5.32 Mlig455_014779

Neo: -

Age: -

1.752 - - - 0.797 - 0.955 Mlig455_014779 {REF} {Length: 1707} {TRANSSPLICED} {Pfam: Innexin [PF00876.20, score=319.6]} {Dmel: FBgn0085387, shakB, shaking B, [Score=110, Expect=1e-26]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=240, Expect=2e-75]} {Smed: dd_Smed_v6_6114_0_3, dd_Smed_v6_6114_0_3, [Score=251, Expect=8e-79]} {RNA1509_42593} {RNA1310_19028} {RNA815_11478}
4. MligTC455_35442 359 7.49 Mlig455_037038

Neo: -

Age: -

1.7 - - - - 0.715 0.985 Mlig455_037038 {REF} {Length: 2728} {Pfam: Acyltransferase family [PF01757.24, score=100.8]; Nose resistant-to-fluoxetine protein, N-terminal domain [PF20146.1, score=67.3]} {Mouse: ENSMUSG00000046610, Oacyl, O-acyltransferase like, [Score=169, Expect=1e-43]} {Dmel: FBgn0052645, CG32645, [Score=259, Expect=3e-74]} {Celegans: WBGene00007833, oac-6, O-ACyltransferase homolog, [RH, Score=235, Expect=1e-66]} {RNA1509_19999} {RNA1310_7490.1, RNA1509_19999} {RNA1509_19999, RNA815_17892}
5. MligTC455_18648 470 9.79 Mlig455_063464

Neo: -

Age: logFC(26M/2M)=-0.661

1.695 - - - 0.744 - 0.951 Mlig455_063464 {REF} {Length: 1671} {Pfam: BTB/POZ domain [PF00651.33, score=33.9]} {RNA1509_21795, RNA1509_45066} {RNA1310_23212, RNA1509_21795} {RNA1509_21795, RNA815_2283.1}
6. MligTC455_40052 513 10.68 Mlig455_035856

Neo: -

Age: -

1.673 - - - - 0.721 0.952 Mlig455_035856 {REF} {Length: 3180} {TRANSSPLICED} {Smed: dd_Smed_v6_14291_0_1, dd_Smed_v6_14291_0_1, [RH, Score=221, Expect=3e-61]} {RNA1509_6964} {RNA1310_5805} {RNA815_1720}
7. MligTC455_40658 152 3.17 Mlig455_064614

Neo: -

Age: -

CLIP2 1.658 - - - - 0.952 0.706 Mlig455_064614 {REF} {Length: 2460} {Pfam: CAP-Gly domain [PF01302.27, score=60.7]} {Human: ENSG00000106665, CLIP2, CAP-Gly domain containing linker protein 2, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000063146, Clip2, CAP-GLY domain containing linker protein 2, [Score=62.0, Expect=9e-10]} {Dmel: FBgn0036882, CG9279, [Score=55.1, Expect=9e-08]} {Smed: dd_Smed_v6_12985_0_1, dd_Smed_v6_12985_0_1, [Score=56.2, Expect=2e-08]} {RNA1310_20676} {RNA815_40746}
8. MligTC455_23213 595 12.4 Mlig455_009489

Neo: -

Age: -

1.653 - - - - 0.951 0.702 Mlig455_009489 {REF} {Length: 1269} {NoTransDecoderORF} {RNA1509_21518} {RNA1310_37571} {RNA815_11346}
9. MligTC455_50950 430 8.96 Mlig455_018894

Neo: -

Age: Up-Down-Up

0.979 - - - - - 0.979 Mlig455_018894 {REF} {Length: 2503} {TRANSSPLICED} {RNA1509_43023} {RNA1310_34717, RNA1509_43023} {RNA1509_43023, RNA815_16155}
10. MligTC455_47441 543 11.32 Mlig455_045866

Neo: -

Age: -

0.975 - - - - 0.975 - Mlig455_045866 {REF} {Length: 2993} {TRANSSPLICED} {Smed: dd_Smed_v6_11834_0_1, dd_Smed_v6_11834_0_1, [RH, Score=173, Expect=4e-47]} {RNA1509_34658, RNA1509_4754} {RNA1310_5693.1, RNA1509_34658, RNA1509_4754} {RNA1509_34658, RNA1509_4754, RNA815_2001}
11. MligTC455_48827 761 15.86 Mlig455_042518

Neo: -

Age: logFC(26M/2M)=-0.412

ANO7 0.967 - - - - 0.967 - Mlig455_042518 {REF} {Length: 4110} {Pfam: Calcium-activated chloride channel [PF04547.14, score=290.9]; Dimerisation domain of Ca+-activated chloride-channel, anoctamin [PF16178.7, score=33.9]} {Human: ENSG00000146205, ANO7, anoctamin 7, [Score=164, Expect=8e-41]} {Mouse: ENSMUSG00000034107, Ano7, anoctamin 7, [Score=165, Expect=1e-41]; ENSMUSG00000031075, Ano1, anoctamin 1, calcium activated chloride channel, [Score=160, Expect=1e-39]; ENSMUSG00000064210, Ano6, anoctamin 6, [Score=157, Expect=4e-39]} {Dmel: FBgn0030349, CG10353, [Score=157, Expect=6e-39]} {Celegans: WBGene00010138, anoh-1, Anoctamin, [Score=263, Expect=3e-75]} {Smed: dd_Smed_v6_19189_0_1, dd_Smed_v6_19189_0_1, [Score=161, Expect=5e-41]} {RNA1509_6346} {RNA1310_5254, RNA1509_6346} {RNA1509_6346, RNA815_4443}
12. MligTC455_47621 1270 26.46 Mlig455_010483

Neo: -

Age: -

0.962 - - - - - 0.962 Mlig455_010483 {REF} {Length: 2702} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=18.8]} {RNA1509_3407, RNA1509_9846} {RNA1310_8526.1, RNA1509_3407, RNA1509_9846} {RNA1509_3407, RNA1509_9846, RNA815_3060}
13. MligTC455_52883 688 14.33 Mlig455_039218

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.432

LRRC6 0.957 - - - - - 0.957 Mlig455_039218 {REF} {Length: 1764} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=55.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=45.3]; Leucine rich repeat [PF13855.8, score=33.7]} {Human: ENSG00000129295, LRRC6, leucine rich repeat containing 6, [RH, Score=375, Expect=2e-126]} {Mouse: ENSMUSG00000022375, Lrrc6, leucine rich repeat containing 6 (testis), [RH, Score=388, Expect=3e-131]} {Dmel: FBgn0014395, tilB, touch insensitive larva B, [RH, Score=326, Expect=2e-108]} {Celegans: WBGene00011637, sds-22, Protein phosphatase 1 regulatory subunit SDS22 homolog, [Score=56.6, Expect=1e-08]} {Smed: dd_Smed_v6_10124_0_1, dd_Smed_v6_10124_0_1, [RH, Score=451, Expect=5e-157]} {RNA1509_19577, RNA1509_30968} {RNA1310_13541.1, RNA1509_19577, RNA1509_30968} {RNA1509_19577, RNA1509_30968, RNA815_15351}
14. MligTC455_17387 3097 64.53 Mlig455_009773, Mlig455_054923

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.622

FAM221A 0.956 - - 0.956 - - -

Mlig455_009773 {REF} {Length: 2787} {Pfam: Protein FAM221A/B [PF14753.8, score=301.8]} {Human: ENSG00000188732, FAM221A, family with sequence similarity 221 member A, [RH, Score=332, Expect=6e-114]} {Mouse: ENSMUSG00000047115, Fam221a, family with sequence similarity 221, member A, [RH, Score=325, Expect=6e-111]} {Smed: dd_Smed_v6_10324_0_1, dd_Smed_v6_10324_0_1, [RH, Score=401, Expect=3e-141]} {RNA1509_39364} {RNA1310_13611.2} {RNA815_11372}

Mlig455_054923 {REF} {Length: 2730} {Pfam: Protein FAM221A/B [PF14753.8, score=301.8]} {Human: ENSG00000188732, FAM221A, family with sequence similarity 221 member A, [RH, Score=332, Expect=6e-114]} {Mouse: ENSMUSG00000047115, Fam221a, family with sequence similarity 221, member A, [RH, Score=325, Expect=6e-111]} {Smed: dd_Smed_v6_10324_0_1, dd_Smed_v6_10324_0_1, [RH, Score=401, Expect=3e-141]} {RNA1509_3690, RNA1509_39364, RNA1509_8486} {RNA1310_13611.2, RNA1509_3690, RNA1509_39364, RNA1509_8486} {RNA1509_3690, RNA1509_39364, RNA1509_8486, RNA815_11372}
15. MligTC455_17150 374 7.79 Mlig455_033799, Mlig455_050240

Neo: -

Age: -

0.954 - - - - - 0.954

Mlig455_033799 {REF} {Length: 394} {RNA1509_43209} {RNA1310_49037, RNA1509_43209} {RNA1509_43209, RNA815_24538}

Mlig455_050240 {REF} {Length: 215} {NoTransDecoderORF} {RNA1509_43209} {RNA1310_105303} {RNA815_36442}
16. MligTC455_41261 2127 44.3 Mlig455_037550, Mlig455_057309

Neo: -

Age: logFC(26M/2M)=-0.461

AP1S2 0.954 - - - - - 0.954

Mlig455_037550 {REF} {Length: 1255} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=196.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=259, Expect=8e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=254, Expect=9e-88]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=259, Expect=5e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=254, Expect=6e-88]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [Score=251, Expect=1e-86]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=257, Expect=4e-89]} {Smed: dd_Smed_v6_2365_0_3, dd_Smed_v6_2365_0_3, [RH, Score=261, Expect=5e-91]} {RNA1509_7990} {RNA1310_28838, RNA1509_7990} {RNA1509_7990, RNA815_12912}

Mlig455_057309 {REF} {Length: 1188} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=196.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=259, Expect=8e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=254, Expect=9e-88]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=259, Expect=5e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=254, Expect=6e-88]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [Score=251, Expect=1e-86]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=257, Expect=4e-89]} {Smed: dd_Smed_v6_2365_0_3, dd_Smed_v6_2365_0_3, [RH, Score=261, Expect=5e-91]} {RNA1509_7990} {RNA1310_28838} {RNA815_12912}
17. MligTC455_45671 729 15.2 Mlig455_029721

Neo: -

Age: logFC(26M/2M)=-0.350

Region-enriched R4: 1.145/0.04489

0.954 - - - - - 0.954 Mlig455_029721 {REF} {Length: 1159} {TRANSSPLICED} {Pfam: Predicted membrane protein [PF09799.11, score=56.1]} {Smed: dd_Smed_v6_14636_0_1, dd_Smed_v6_14636_0_1, [Score=48.9, Expect=7e-08]} {RNA1509_35137, RNA1509_57575} {RNA1310_30722.1, RNA1509_35137, RNA1509_57575} {RNA1509_35137, RNA1509_57575, RNA815_13266}
18. MligTC455_47807 2664 55.5 Mlig455_050143

Neo: -

Age: -

Region-specific R2: 3.807

Region-enriched R2: 2.561/0.00001

0.951 - - - - 0.951 - Mlig455_050143 {REF} {Length: 1560} {RNA1509_1605, RNA1509_28756} {RNA1310_30659.1, RNA1509_28756} {RNA1509_28756, RNA815_13807}
19. MligTC455_22340 3334 69.47 Mlig455_014248

Neo: -

Age: -

EFHC1 0.95 - - - - 0.950 - Mlig455_014248 {REF} {Length: 1821} {Pfam: DUF1126 PH-like domain [PF06565.14, score=178.7]} {Human: ENSG00000096093, EFHC1, EF-hand domain containing 1, [Score=318, Expect=3e-103]} {Mouse: ENSMUSG00000041809, Efhc1, EF-hand domain (C-terminal) containing 1, [Score=294, Expect=8e-94]} {Dmel: FBgn0034487, Efhc1.2, EF-hand domain containing 1.2, [Score=187, Expect=6e-53]} {Smed: dd_Smed_v6_2935_0_1, dd_Smed_v6_2935_0_1, [Score=464, Expect=2e-160]} {RNA1509_1890} {RNA1310_7623.1} {RNA815_2220}
20. MligTC455_25112 611 12.74 Mlig455_020700

Neo: -

Age: Down-Down-Up

Region-enriched R7: 1.981/0.01296

0.95 - - - - 0.950 - Mlig455_020700 {REF} {Length: 831} {Celegans: WBGene00003748, nlp-10, Neuropeptide-Like Protein, [Score=46.6, Expect=8e-07]} {RNA1509_27832, RNA1509_36958} {RNA1310_50245, RNA1509_27832, RNA1509_36958} {RNA1509_27832, RNA1509_36958, RNA815_48543}
21. MligTC455_47716 1445 30.1 Mlig455_062374, Mlig455_062397

Neo: -

Age: Down-Up-Up

Region-specific R2: 4.444

Region-enriched R2: 3.549/0.00000
Region-enriched R4: 2.056/0.01731

0.95 - - - - 0.950 -

Mlig455_062374 {REF} {Length: 899} {RNA1509_16194} {RNA1310_50819.1} {RNA815_25538}

Mlig455_062397 {REF} {Length: 907} {RNA1509_16194} {RNA1310_50819.1, RNA1509_16194} {RNA1509_16194, RNA815_25538}
22. MligTC455_50669 1941 40.44 Mlig455_004231, Mlig455_031063

Neo: -

Age: logFC(26M/2M)=-0.342

VWA3A 0.95 - - - - 0.950 -

Mlig455_004231 {REF} {Length: 4288} {Pfam: von Willebrand factor type A domain [PF13768.8, score=204.1]; von Willebrand factor type A domain [PF00092.30, score=57.9]; von Willebrand factor type A domain [PF13519.8, score=50.5]; VWA domain containing CoxE-like protein [PF05762.16, score=24.5]} {Human: ENSG00000283835, VWA3A, von Willebrand factor A domain containing 3A, [RH, Score=889, Expect=0.0]; ENSG00000175267, VWA3A, von Willebrand factor A domain containing 3A, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000030889, Vwa3a, von Willebrand factor A domain containing 3A, [RH, Score=840, Expect=0.0]} {Smed: dd_Smed_v6_10972_0_2, dd_Smed_v6_10972_0_2, [RH, Score=1105, Expect=0.0]} {RNA1509_3167} {RNA1310_447.1} {RNA815_579}

Mlig455_031063 {REF} {Length: 4311} {Pfam: von Willebrand factor type A domain [PF13768.8, score=203.9]; von Willebrand factor type A domain [PF00092.30, score=57.7]; von Willebrand factor type A domain [PF13519.8, score=50.3]; VWA domain containing CoxE-like protein [PF05762.16, score=24.4]} {Human: ENSG00000283835, VWA3A, von Willebrand factor A domain containing 3A, [RH, Score=890, Expect=0.0]; ENSG00000175267, VWA3A, von Willebrand factor A domain containing 3A, [RH, Score=888, Expect=0.0]} {Mouse: ENSMUSG00000030889, Vwa3a, von Willebrand factor A domain containing 3A, [RH, Score=840, Expect=0.0]} {Smed: dd_Smed_v6_10972_0_2, dd_Smed_v6_10972_0_2, [RH, Score=1104, Expect=0.0]} {RNA1509_3167} {RNA1310_447.1, RNA1509_3167} {RNA1509_3167, RNA815_579}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA