TomoSeq data search

Data search

Results for MligTC455_41261

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_41261

2127

44.30

Mlig455_037550, Mlig455_057309

Neo: -

Age: logFC(26M/2M)=-0.461

AP1S2

Mlig455_037550 {REF} {Length: 1255} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=196.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=259, Expect=8e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=254, Expect=9e-88]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=259, Expect=5e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=254, Expect=6e-88]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [Score=251, Expect=1e-86]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=257, Expect=4e-89]} {Smed: dd_Smed_v6_2365_0_3, dd_Smed_v6_2365_0_3, [RH, Score=261, Expect=5e-91]} {RNA1509_7990} {RNA1310_28838, RNA1509_7990} {RNA1509_7990, RNA815_12912}

Mlig455_057309 {REF} {Length: 1188} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=196.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=259, Expect=8e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=254, Expect=9e-88]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=259, Expect=5e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=254, Expect=6e-88]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [Score=251, Expect=1e-86]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=257, Expect=4e-89]} {Smed: dd_Smed_v6_2365_0_3, dd_Smed_v6_2365_0_3, [RH, Score=261, Expect=5e-91]} {RNA1509_7990} {RNA1310_28838} {RNA815_12912}

Cumulative graph for MligTC455_41261

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.181	5.623	0.78927	1.00000
RegionR2	-0.357	5.623	0.33917	0.73102
RegionR3	0.08	5.623	0.79425	1.00000
RegionR4	0.576	5.623	0.11664	0.34082
RegionR5	-0.028	5.623	0.92649	1.00000
RegionR6	0.13	5.623	0.67929	1.00000
RegionR7	-0.26	5.623	0.48942	1.00000
RegionR8	-0.32	5.623	0.48329	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.448	5.623	0.14234	0.88236
RegenerationR2	0.239	5.623	0.50537	0.87333
RegenerationR3	-0.231	5.623	0.54922	0.88330
RegenerationR4	-0.157	5.623	0.68764	0.94832
RegenerationR5	-0.202	5.623	0.59716	0.90901
RegenerationR6	-0.306	5.623	0.41664	0.74887
RegenerationBL	0.875	5.623	0.01430	0.12475
RegenerationTP	0.095	5.623	0.82453	1.00000

Genes with expression patterns similar to MligTC455_41261

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41261	2127	44.3	Mlig455_037550, Mlig455_057309	Neo: - Age: logFC(26M/2M)=-0.461	AP1S2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_037550 {REF} {Length: 1255} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=196.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=259, Expect=8e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=254, Expect=9e-88]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=259, Expect=5e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=254, Expect=6e-88]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [Score=251, Expect=1e-86]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=257, Expect=4e-89]} {Smed: dd_Smed_v6_2365_0_3, dd_Smed_v6_2365_0_3, [RH, Score=261, Expect=5e-91]} {RNA1509_7990} {RNA1310_28838, RNA1509_7990} {RNA1509_7990, RNA815_12912} Mlig455_057309 {REF} {Length: 1188} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=196.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=259, Expect=8e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=254, Expect=9e-88]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=259, Expect=5e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=254, Expect=6e-88]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [Score=251, Expect=1e-86]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=257, Expect=4e-89]} {Smed: dd_Smed_v6_2365_0_3, dd_Smed_v6_2365_0_3, [RH, Score=261, Expect=5e-91]} {RNA1509_7990} {RNA1310_28838} {RNA815_12912}
2.	MligTC455_41262	1276	26.59	Mlig455_059597	Neo: - Age: Down-Up-Down	AP1S2	4.553	0.948	0.923	-	0.976	0.814	0.892	Mlig455_059597 {REF} {Length: 1239} {Pfam: Clathrin adaptor complex small chain [PF01217.22, score=196.9]} {Human: ENSG00000182287, AP1S2, adaptor related protein complex 1 subunit sigma 2, [RH, Score=259, Expect=8e-90]; ENSG00000106367, AP1S1, adaptor related protein complex 1 subunit sigma 1, [RH, Score=254, Expect=9e-88]} {Mouse: ENSMUSG00000031367, Ap1s2, adaptor-related protein complex 1, sigma 2 subunit, [RH, Score=259, Expect=5e-90]; ENSMUSG00000004849, Ap1s1, adaptor protein complex AP-1, sigma 1, [RH, Score=254, Expect=6e-88]} {Dmel: FBgn0039132, AP-1sigma, Adaptor Protein complex 1, sigma subunit, [Score=251, Expect=1e-86]} {Celegans: WBGene00000159, aps-1, AdaPtin, Small chain (Clathrin associated complex), [Score=257, Expect=4e-89]} {Smed: dd_Smed_v6_2365_0_3, dd_Smed_v6_2365_0_3, [RH, Score=261, Expect=5e-91]} {RNA1509_7990} {RNA1310_28838} {RNA815_12912}
3.	MligTC455_37111	1709	35.61	Mlig455_015739, Mlig455_049445, Mlig455_049459	Neo: - Age: logFC(26M/2M)=-0.249 Region-enriched R2: 1.162/0.04679		1.841	-	0.960	-	-	-	0.881	Mlig455_015739 {REF} {Length: 1115} {RNA1509_33493} {RNA1310_28591.1} {RNA815_13812.1} Mlig455_049445 {REF} {Length: 1524} {RNA1509_21694, RNA1509_33493} {RNA1310_28591.1, RNA1509_21694, RNA1509_33493} {RNA1509_21694, RNA1509_33493, RNA815_13812.1} Mlig455_049459 {REF} {Length: 2200} {RNA1509_21694} {RNA1310_28591.1} {RNA815_13812.1}
4.	MligTC455_18965	472	9.83	Mlig455_010589	Neo: - Age: Down-Up-Down	STK38	1.671	-	-	-	0.963	-	0.708	Mlig455_010589 {REF} {Length: 2418} {Pfam: Protein kinase domain [PF00069.27, score=201.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.6]; ABC1 atypical kinase-like domain [PF03109.18, score=32.8]; Protein kinase C terminal domain [PF00433.26, score=19.8]} {Human: ENSG00000112079, STK38, serine/threonine kinase 38, [Score=614, Expect=0.0]; ENSG00000211455, STK38L, serine/threonine kinase 38 like, [Score=607, Expect=0.0]} {Mouse: ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [RH, Score=615, Expect=0.0]} {Dmel: FBgn0003744, trc, tricornered, [RH, Score=607, Expect=0.0]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [RH, Score=562, Expect=0.0]} {Smed: dd_Smed_v6_6462_0_3, dd_Smed_v6_6462_0_3, [RH, Score=595, Expect=0.0]} {RNA1509_22842} {RNA1310_12343} {RNA815_4455}
5.	MligTC455_40052	513	10.68	Mlig455_035856	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_035856 {REF} {Length: 3180} {TRANSSPLICED} {Smed: dd_Smed_v6_14291_0_1, dd_Smed_v6_14291_0_1, [RH, Score=221, Expect=3e-61]} {RNA1509_6964} {RNA1310_5805} {RNA815_1720}
6.	MligTC455_41776	767	15.97	Mlig455_049379	Neo: - Age: -	IQCB1	0.958	-	-	-	-	-	0.958	Mlig455_049379 {REF} {Length: 2348} {Pfam: IQ calmodulin-binding motif [PF00612.29, score=30.0]} {Human: ENSG00000173226, IQCB1, IQ motif containing B1, [RH, Score=202, Expect=2e-56]} {Mouse: ENSMUSG00000022837, Iqcb1, IQ calmodulin-binding motif containing 1, [RH, Score=220, Expect=3e-63]} {Smed: dd_Smed_v6_11329_0_1, dd_Smed_v6_11329_0_1, [RH, Score=233, Expect=4e-68]} {RNA1509_36269, RNA1509_8893} {RNA1310_11108.1, RNA1509_36269, RNA1509_8893} {RNA1509_36269, RNA1509_8893, RNA815_4095.1}
7.	MligTC455_40285	1881	39.19	Mlig455_057081	Neo: - Age: logFC(26M/2M)=-0.239	IQCA1	0.957	-	-	-	-	-	0.957	Mlig455_057081 {REF} {Length: 2924} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=56.3]} {Human: ENSG00000132321, IQCA1, IQ motif containing with AAA domain 1, [RH, Score=773, Expect=0.0]} {Mouse: ENSMUSG00000026301, Iqca, IQ motif containing with AAA domain, [Score=736, Expect=0.0]} {Dmel: FBgn0037712, CG16789, [Score=542, Expect=0.0]} {Smed: dd_Smed_v6_9484_0_1, dd_Smed_v6_9484_0_1, [RH, Score=496, Expect=7e-168]} {RNA1509_2357} {RNA1310_6088.1} {RNA815_1468.1}
8.	MligTC455_24399	435	9.06	Mlig455_062067	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.587		0.954	-	-	-	-	-	0.954	Mlig455_062067 {REF} {Length: 3174} {RNA1509_54646} {RNA1310_12048} {RNA815_7357}
9.	MligTC455_27539	594	12.37	Mlig455_044450	Neo: - Age: -	ANKRD44	0.953	-	0.953	-	-	-	-	Mlig455_044450 {REF} {Length: 18303} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=294.6]; Ankyrin repeats (many copies) [PF13637.8, score=213.3]; Ankyrin repeat [PF13606.8, score=144.6]; Ankyrin repeats (many copies) [PF13857.8, score=135.0]; Ankyrin repeat [PF00023.32, score=92.5]; PT repeat [PF04886.14, score=78.5]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=122, Expect=3e-27]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=111, Expect=4e-24]} {Dmel: FBgn0011747, Ank, Ankyrin, [Score=104, Expect=5e-22]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=96.3, Expect=1e-19]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=118, Expect=1e-26]} {RNA1509_28032} {RNA1310_2236, RNA1509_28032} {RNA1509_28032, RNA815_397.1}
10.	MligTC455_48706	477	9.94	Mlig455_000191	Neo: - Age: Down-Up-Down	SLC16A12	0.953	-	-	-	-	-	0.953	Mlig455_000191 {REF} {Length: 2035} {Pfam: Major Facilitator Superfamily [PF07690.18, score=96.1]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=108, Expect=1e-24]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=108, Expect=6e-25]; ENSMUSG00000041920, Slc16a6, solute carrier family 16 (monocarboxylic acid transporters), member 6, [Score=107, Expect=2e-24]} {Dmel: FBgn0033657, Sln, Silnoon, [Score=105, Expect=2e-23]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=82.8, Expect=2e-16]} {Smed: dd_Smed_v6_10147_0_4, dd_Smed_v6_10147_0_4, [Score=55.5, Expect=6e-08]} {RNA1509_47586} {RNA1310_16175} {RNA815_10056}
11.	MligTC455_41005	630	13.13	Mlig455_005710	Neo: - Age: logFC(26M/2M)=-0.295 Region-enriched R4: 1.610/0.00488	SLCO5A1	0.951	-	0.951	-	-	-	-	Mlig455_005710 {REF} {Length: 5666} {TRANSSPLICED} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=427.7]; Major Facilitator Superfamily [PF07690.18, score=71.5]} {Human: ENSG00000137571, SLCO5A1, solute carrier organic anion transporter family member 5A1, [Score=318, Expect=2e-94]} {Mouse: ENSMUSG00000025938, Slco5a1, solute carrier organic anion transporter family, member 5A1, [Score=329, Expect=1e-98]} {Dmel: FBgn0032123, Oatp30B, Organic anion transporting polypeptide 30B, [RH, Score=320, Expect=4e-93]} {Celegans: WBGene00018739, F53B1.8, Solute carrier organic anion transporter family member, [Score=226, Expect=3e-62]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [RH, Score=274, Expect=1e-79]} {RNA1509_5566, RNA1509_57847} {RNA1310_5844, RNA1509_5566, RNA1509_57847} {RNA1509_5566, RNA1509_57847, RNA815_3658}
12.	MligTC455_41919	125	2.61	Mlig455_048053	Neo: - Age: Up-Down-Up Region-enriched R2: 4.173/0.00312		0.951	-	0.951	-	-	-	-	Mlig455_048053 {REF} {Length: 2537} {Pfam: Innexin [PF00876.20, score=331.0]} {Dmel: FBgn0265274, Inx3, Innexin 3, [Score=88.2, Expect=1e-18]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=254, Expect=8e-80]} {Smed: dd_Smed_v6_8019_0_1, dd_Smed_v6_8019_0_1, [Score=296, Expect=3e-95]} {RNA1509_58318} {RNA1310_9243} {RNA815_4486.1}
13.	MligTC455_48598	972	20.25	Mlig455_047165, Mlig455_048517	Neo: - Age: Down-Up-Up	RAC1	0.951	-	0.951	-	-	-	-	Mlig455_047165 {REF} {Length: 2607} {Pfam: Ras family [PF00071.24, score=171.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=76.0]; ADP-ribosylation factor family [PF00025.23, score=19.3]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=182, Expect=8e-57]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=180, Expect=3e-56]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=178, Expect=2e-55]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=182, Expect=6e-57]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=178, Expect=9e-56]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=178, Expect=2e-55]} {Dmel: FBgn0014380, RhoL, Rho-like, [Score=188, Expect=1e-59]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=181, Expect=8e-57]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=187, Expect=1e-59]} {RNA1509_15267} {RNA1310_21494} {RNA815_7950} Mlig455_048517 {REF} {Length: 2513} {Pfam: Ras family [PF00071.24, score=178.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=81.9]; ADP-ribosylation factor family [PF00025.23, score=24.4]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=185, Expect=3e-59]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=184, Expect=7e-59]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=181, Expect=5e-58]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=185, Expect=2e-59]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=181, Expect=4e-58]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=181, Expect=4e-58]} {Dmel: FBgn0014380, RhoL, Rho-like, [Score=191, Expect=5e-62]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=184, Expect=2e-59]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=191, Expect=3e-62]} {RNA1509_15267} {RNA1310_21494, RNA1509_15267} {RNA1509_15267, RNA815_7950}

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