Data search


search
Exact
Search

Results for MligTC455_24410

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24410 127 2.64 Mlig455_028637

Neo: -

Age: -

Mlig455_028637 {REF} {Length: 702} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_44347} {RNA1310_44746} {RNA815_28549}

Cumulative graph for MligTC455_24410

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.189 2.29 0.42550 1.00000
RegionR2 0.378 2.29 0.70431 1.00000
RegionR3 0.198 2.29 0.77759 1.00000
RegionR4 2.148 2.29 0.02864 0.13147
RegionR5 1.485 2.29 0.06211 0.21865
RegionR6 0.24 2.29 0.76117 1.00000
RegionR7 1.199 2.29 0.28719 0.92110
RegionR8 -1.46 2.29 0.99648 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.256 2.29 1.00000 1.00000
RegenerationR2 -0.009 2.29 0.98529 1.00000
RegenerationR3 0.214 2.29 0.76774 0.97075
RegenerationR4 -0.324 2.29 0.63823 0.92662
RegenerationR5 -0.3 2.29 0.60093 0.91031
RegenerationR6 0.372 2.29 0.62807 0.88558
RegenerationBL 0.351 2.29 0.75029 1.00000
RegenerationTP -0.927 2.29 0.55759 0.93714


Genes with expression patterns similar to MligTC455_24410

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24410 127 2.64 Mlig455_028637

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_028637 {REF} {Length: 702} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_44347} {RNA1310_44746} {RNA815_28549}
2. MligTC455_24409 158 3.3 Mlig455_028615

Neo: -

Age: -

NFIA 4.827 0.984 0.970 0.972 0.948 - 0.953 Mlig455_028615 {REF} {Length: 5700} {Human: ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=97.4, Expect=3e-20]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=97.1, Expect=6e-20]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=97.4, Expect=2e-20]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.7, Expect=3e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=101, Expect=1e-21]} {Smed: dd_Smed_v6_7403_0_1, dd_Smed_v6_7403_0_1, [RH, Score=170, Expect=4e-43]} {RNA1509_25355, RNA1509_44347} {RNA1310_4670.1, RNA1509_25355, RNA1509_44347} {RNA1509_25355, RNA1509_44347, RNA815_17090}
3. MligTC455_51488 705 14.69 Mlig455_012553

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.664

Region-enriched R3: 2.668/0.00000
Region-enriched R6: 2.438/0.00009

0.962 - - - - - 0.962 Mlig455_012553 {REF} {Length: 1481} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=34.4]} {RNA1509_12735, RNA1509_14804, RNA1509_20818} {RNA1310_19974, RNA1509_12735, RNA1509_20818} {RNA1509_12735, RNA1509_20818, RNA815_8492}
4. MligTC455_43773 671 13.98 Mlig455_004354

Neo: -

Age: Up-Down-Down

Region-enriched R4: 2.398/0.00965

SPAG1 0.953 0.953 - - - - - Mlig455_004354 {REF} {Length: 3601} {TRANSSPLICED} {Pfam: Potential Monad-binding region of RPAP3 [PF13877.8, score=56.8]; Tetratricopeptide repeat [PF07719.19, score=46.7]; Tetratricopeptide repeat [PF00515.30, score=45.6]; Tetratricopeptide repeat [PF13431.8, score=34.4]; TPR repeat [PF13414.8, score=31.4]; Tetratricopeptide repeat [PF14559.8, score=31.0]; Tetratricopeptide repeat [PF13181.8, score=22.9]; Tetratricopeptide repeat [PF13371.8, score=22.2]; Tetratricopeptide repeat [PF13428.8, score=20.1]} {Human: ENSG00000104450, SPAG1, sperm associated antigen 1, [Score=90.5, Expect=2e-18]} {Mouse: ENSMUSG00000022466, Rpap3, RNA polymerase II associated protein 3, [Score=80.5, Expect=2e-15]; ENSMUSG00000037617, Spag1, sperm associated antigen 1, [Score=77.4, Expect=2e-14]} {Dmel: FBgn0029174, FKBP59, FK506-binding protein FKBP59, [Score=68.9, Expect=4e-12]} {Celegans: WBGene00019893, sgt-1, Small Glutamine-rich Tetratrico repeat protein, [Score=57.4, Expect=1e-08]} {Smed: dd_Smed_v6_9137_0_1, dd_Smed_v6_9137_0_1, [Score=70.9, Expect=5e-13]} {RNA1509_17515} {RNA1310_5355} {RNA815_5507}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA