TomoSeq data search

Data search

Results for MligTC455_24452

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24452

301

6.28

Mlig455_001252, Mlig455_034610

Neo: -

Age: Up-Down-Down

TTN

Mlig455_001252 {REF} {Length: 13030} {Pfam: Fibronectin type III domain [PF00041.23, score=730.9]; Immunoglobulin I-set domain [PF07679.18, score=682.4]; Immunoglobulin domain [PF13927.8, score=393.0]; Protein kinase domain [PF00069.27, score=226.9]; Immunoglobulin domain [PF13895.8, score=224.8]; Immunoglobulin domain [PF00047.27, score=195.8]; Immunoglobulin V-set domain [PF07686.19, score=144.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.2]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=101.8]; Tissue factor [PF01108.19, score=79.4]; Natural killer cell receptor 2B4 [PF11465.10, score=52.3]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=47.2]; Izumo-like Immunoglobulin domain [PF16706.7, score=41.3]; Penicillin-Binding Protein C-terminus Family [PF06832.14, score=39.4]; ABC1 atypical kinase-like domain [PF03109.18, score=37.0]; Fibronectin type III domain [PF16893.7, score=36.1]; Immunoglobulin C1-set domain [PF07654.17, score=35.0]; Immunoglobulin domain [PF18452.3, score=31.5]; MBG domain [PF17883.3, score=20.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.0]} {Human: ENSG00000155657, TTN, titin, [RH, Score=1207, Expect=0.0]} {Mouse: ENSMUSG00000051747, Ttn, titin, [RH, Score=1203, Expect=0.0]} {Dmel: FBgn0005666, bt, bent, [RH, Score=2438, Expect=0.0]} {Celegans: WBGene00006759, unc-22, Twitchin, [RH, Score=2271, Expect=0.0]} {Smed: dd_Smed_v6_2544_0_1, dd_Smed_v6_2544_0_1, [RH, Score=3863, Expect=0.0]} {RNA1509_22302} {RNA1310_74.1, RNA1509_22302} {RNA1509_22302, RNA815_51}

Mlig455_034610 {REF} {Length: 1795} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=80.8]; Immunoglobulin domain [PF13927.8, score=64.2]; Immunoglobulin domain [PF13895.8, score=51.2]; Immunoglobulin domain [PF00047.27, score=46.6]; Immunoglobulin V-set domain [PF07686.19, score=40.0]} {Human: ENSG00000155657, TTN, titin, [Score=59.7, Expect=1e-08]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=52.0, Expect=2e-06]; ENSMUSG00000050272, Dscam, DS cell adhesion molecule, [Score=52.0, Expect=2e-06]; ENSMUSG00000020067, Mypn, myopalladin, [Score=49.7, Expect=1e-05]} {Dmel: FBgn0005666, bt, bent, [Score=84.0, Expect=1e-16]} {Celegans: WBGene00006759, unc-22, Twitchin, [Score=72.0, Expect=7e-13]} {Smed: dd_Smed_v6_2544_0_1, dd_Smed_v6_2544_0_1, [Score=113, Expect=3e-26]} {RNA1509_22302} {RNA1310_74.1} {RNA815_6277}

Cumulative graph for MligTC455_24452

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.481	3.014	0.20344	0.84246
RegionR2	0.326	3.014	0.70275	1.00000
RegionR3	0.644	3.014	0.45348	0.96468
RegionR4	0.06	3.014	0.83201	1.00000
RegionR5	0.202	3.014	0.76010	1.00000
RegionR6	1.43	3.014	0.03671	0.35783
RegionR7	1.018	3.014	0.27702	0.90847
RegionR8	1.801	3.014	0.03982	0.39189

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.912	3.014	0.19532	0.93422
RegenerationR2	-0.138	3.014	0.76334	0.97770
RegenerationR3	-1.006	3.014	0.06078	0.41931
RegenerationR4	-0.197	3.014	0.75339	0.97041
RegenerationR5	-0.728	3.014	0.16890	0.59607
RegenerationR6	-1.133	3.014	0.03031	0.21744
RegenerationBL	-1.079	3.014	0.10327	0.37923
RegenerationTP	-1.836	3.014	0.01367	0.20018

Genes with expression patterns similar to MligTC455_24452

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24452	301	6.28	Mlig455_001252, Mlig455_034610	Neo: - Age: Up-Down-Down	TTN	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_001252 {REF} {Length: 13030} {Pfam: Fibronectin type III domain [PF00041.23, score=730.9]; Immunoglobulin I-set domain [PF07679.18, score=682.4]; Immunoglobulin domain [PF13927.8, score=393.0]; Protein kinase domain [PF00069.27, score=226.9]; Immunoglobulin domain [PF13895.8, score=224.8]; Immunoglobulin domain [PF00047.27, score=195.8]; Immunoglobulin V-set domain [PF07686.19, score=144.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=114.2]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=101.8]; Tissue factor [PF01108.19, score=79.4]; Natural killer cell receptor 2B4 [PF11465.10, score=52.3]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=47.2]; Izumo-like Immunoglobulin domain [PF16706.7, score=41.3]; Penicillin-Binding Protein C-terminus Family [PF06832.14, score=39.4]; ABC1 atypical kinase-like domain [PF03109.18, score=37.0]; Fibronectin type III domain [PF16893.7, score=36.1]; Immunoglobulin C1-set domain [PF07654.17, score=35.0]; Immunoglobulin domain [PF18452.3, score=31.5]; MBG domain [PF17883.3, score=20.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.0]} {Human: ENSG00000155657, TTN, titin, [RH, Score=1207, Expect=0.0]} {Mouse: ENSMUSG00000051747, Ttn, titin, [RH, Score=1203, Expect=0.0]} {Dmel: FBgn0005666, bt, bent, [RH, Score=2438, Expect=0.0]} {Celegans: WBGene00006759, unc-22, Twitchin, [RH, Score=2271, Expect=0.0]} {Smed: dd_Smed_v6_2544_0_1, dd_Smed_v6_2544_0_1, [RH, Score=3863, Expect=0.0]} {RNA1509_22302} {RNA1310_74.1, RNA1509_22302} {RNA1509_22302, RNA815_51} Mlig455_034610 {REF} {Length: 1795} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=80.8]; Immunoglobulin domain [PF13927.8, score=64.2]; Immunoglobulin domain [PF13895.8, score=51.2]; Immunoglobulin domain [PF00047.27, score=46.6]; Immunoglobulin V-set domain [PF07686.19, score=40.0]} {Human: ENSG00000155657, TTN, titin, [Score=59.7, Expect=1e-08]} {Mouse: ENSMUSG00000051747, Ttn, titin, [Score=52.0, Expect=2e-06]; ENSMUSG00000050272, Dscam, DS cell adhesion molecule, [Score=52.0, Expect=2e-06]; ENSMUSG00000020067, Mypn, myopalladin, [Score=49.7, Expect=1e-05]} {Dmel: FBgn0005666, bt, bent, [Score=84.0, Expect=1e-16]} {Celegans: WBGene00006759, unc-22, Twitchin, [Score=72.0, Expect=7e-13]} {Smed: dd_Smed_v6_2544_0_1, dd_Smed_v6_2544_0_1, [Score=113, Expect=3e-26]} {RNA1509_22302} {RNA1310_74.1} {RNA815_6277}
2.	MligTC455_24451	289	6.03	Mlig455_059948	Neo: - Age: -		5.852	0.999	1.000	0.998	0.971	0.893	0.991	Mlig455_059948 {REF} {Length: 2249} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=31.3]; Immunoglobulin domain [PF13927.8, score=23.6]; Izumo-like Immunoglobulin domain [PF16706.7, score=21.9]; Immunoglobulin domain [PF00047.27, score=19.0]; Immunoglobulin domain [PF13895.8, score=18.9]} {Mouse: ENSMUSG00000026207, Speg, SPEG complex locus, [Score=51.2, Expect=2e-07]} {Smed: dd_Smed_v6_2544_0_1, dd_Smed_v6_2544_0_1, [Score=74.3, Expect=7e-16]} {RNA1509_31625} {RNA1310_74.1} {RNA815_6277}
3.	MligTC455_24450	277	5.77	Mlig455_034611	Neo: - Age: -		4.576	0.999	0.920	0.946	0.900	-	0.811	Mlig455_034611 {REF} {Length: 1827} {RNA1509_35741} {RNA1310_52741, RNA1509_35741} {RNA1509_35741, RNA815_31821}
4.	MligTC455_21822	215	4.48	Mlig455_013947	Neo: - Age: Down-Up-Down		0.983	0.983	-	-	-	-	-	Mlig455_013947 {REF} {Length: 3269} {RNA1509_12460, RNA1509_29876} {RNA1310_5676, RNA1509_29876} {RNA1509_29876, RNA815_2024}
5.	MligTC455_37034	924	19.25	Mlig455_064076	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.580		0.971	-	-	-	-	0.971	-	Mlig455_064076 {REF} {Length: 2077} {RNA1509_15229, RNA1509_38414} {RNA1310_12845.1, RNA1509_15229, RNA1509_38414} {RNA1509_15229, RNA1509_38414, RNA815_5731}
6.	MligTC455_44810	226	4.72	Mlig455_013293, Mlig455_035940, Mlig455_058406, Mlig455_058409	Neo: - Age: - Region-specific R2: 6.204 Region-enriched R2: 5.509/0.00501		0.97	-	-	-	-	0.970	-	Mlig455_013293 {REF} {Length: 1362} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=56.6, Expect=2e-09]} {RNA1310_28961.1} {RNA815_27532} Mlig455_035940 {REF} {Length: 1652} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=55.8, Expect=3e-09]} {RNA1310_28961.1} {RNA815_27532} Mlig455_058406 {REF} {Length: 991} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=55.8, Expect=4e-09]} {RNA1310_28961.1} {RNA815_27532} Mlig455_058409 {REF} {Length: 1311} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=55.8, Expect=3e-09]} {RNA1310_28961.1} {RNA815_27532}
7.	MligTC455_27900	122	2.55	Mlig455_012166	Neo: - Age: -	RNF213	0.968	-	-	-	-	0.968	-	Mlig455_012166 {REF} {Length: 15248} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=50.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=47.7]; P-loop containing dynein motor region [PF12775.9, score=42.8]; AAA domain [PF13173.8, score=22.7]; Sigma-54 interaction domain [PF14532.8, score=20.3]} {Human: ENSG00000173821, RNF213, ring finger protein 213, [Score=404, Expect=1e-111]} {Mouse: ENSMUSG00000070327, Rnf213, ring finger protein 213, [Score=403, Expect=2e-111]} {RNA1509_34087, RNA1509_4697} {RNA1310_300.1, RNA1509_34087, RNA1509_4697} {RNA1509_34087, RNA1509_4697, RNA815_205.1}
8.	MligTC455_46173	63	1.3	Mlig455_032091	Neo: Irradiation Age: Up-Down-Up	SRR	0.968	0.968	-	-	-	-	-	Mlig455_032091 {REF} {Length: 2590} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=208.5]; ACT domain [PF01842.27, score=19.8]} {Human: ENSG00000167720, SRR, serine racemase, [Score=129, Expect=2e-32]} {Mouse: ENSMUSG00000001323, Srr, serine racemase, [Score=105, Expect=4e-24]} {Dmel: FBgn0037684, CG8129, [Score=373, Expect=5e-123]} {Celegans: WBGene00010456, K01C8.1, [Score=407, Expect=5e-136]} {Smed: dd_Smed_v6_6737_0_1, dd_Smed_v6_6737_0_1, [Score=474, Expect=7e-163]} {RNA1509_48789} {RNA1310_15074} {RNA815_9364}
9.	MligTC455_19339	1746	36.37	Mlig455_055775	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.338 Region-specific R2: 3.573 Region-enriched R2: 2.166/0.00065		0.963	-	-	-	-	0.963	-	Mlig455_055775 {REF} {Length: 1701} {TRANSSPLICED} {RNA1509_28058, RNA1509_53885} {RNA1310_50737, RNA1509_28058, RNA1509_53885} {RNA1509_28058, RNA1509_53885, RNA815_26880}
10.	MligTC455_26710	57107	1189.73	Mlig455_000780, Mlig455_000781	Neo: - Age: logFC(26M/2M)=-0.460 Region-enriched R2: 4.248/0.00001 Region-enriched R3: 3.578/0.00004		0.962	-	-	-	-	0.962	-	Mlig455_000780 {REF} {Length: 574} {RNA1509_267} {RNA1310_112043} {RNA815_7257.1} Mlig455_000781 {REF} {Length: 649} {RNA1509_22192, RNA1509_24, RNA1509_2520, RNA1509_267, RNA1509_57785} {RNA1310_112043, RNA1509_22192, RNA1509_24, RNA1509_2520, RNA1509_267, RNA1509_57785} {RNA1509_22192, RNA1509_24, RNA1509_2520, RNA1509_267, RNA1509_57785, RNA815_7257.1}
11.	MligTC455_44809	88	1.83	Mlig455_035938	Neo: - Age: -		0.962	-	-	-	-	0.962	-	Mlig455_035938 {REF} {Length: 1369} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=55.8, Expect=3e-09]} {RNA1310_28961.1} {RNA815_27532}
12.	MligTC455_49926	50	1.04	Mlig455_062317	Neo: - Age: -	VSX1	0.96	-	-	-	-	0.960	-	Mlig455_062317 {REF} {Length: 1610} {Pfam: Homeodomain [PF00046.31, score=79.8]} {Human: ENSG00000100987, VSX1, visual system homeobox 1, [RH, Score=202, Expect=4e-61]; ENSG00000119614, VSX2, visual system homeobox 2, [RH, Score=201, Expect=1e-60]} {Mouse: ENSMUSG00000021239, Vsx2, visual system homeobox 2, [RH, Score=201, Expect=8e-61]; ENSMUSG00000033080, Vsx1, visual system homeobox 1, [RH, Score=198, Expect=2e-59]} {Dmel: FBgn0263512, Vsx2, Visual system homeobox 2, [RH, Score=208, Expect=6e-61]} {Celegans: WBGene00000435, ceh-10, Homeobox protein ceh-10, [RH, Score=210, Expect=1e-64]} {Smed: dd_Smed_v6_19286_0_1, dd_Smed_v6_19286_0_1, [RH, Score=212, Expect=1e-65]} {RNA1310_39008} {RNA815_19602}
13.	MligTC455_16872	306	6.37	Mlig455_006228	Neo: - Age: - Region-specific R2: 5.842 Region-enriched R2: 4.577/0.00000		0.957	-	-	-	-	0.957	-	Mlig455_006228 {REF} {Length: 952} {RNA1310_48111} {RNA815_24753}
14.	MligTC455_27938	137	2.85	Mlig455_033961	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_033961 {REF} {Length: 3296} {Pfam: Glycine rich protein [PF12810.9, score=20.4]} {RNA1310_28736.1} {RNA815_45605}
15.	MligTC455_52702	1145	23.86	Mlig455_000394	Neo: - Age: -	DSCAML1	0.955	-	-	-	-	-	0.955	Mlig455_000394 {REF} {Length: 8268} {Pfam: Fibronectin type III domain [PF00041.23, score=177.6]; Immunoglobulin domain [PF13927.8, score=132.6]; Immunoglobulin I-set domain [PF07679.18, score=93.4]; Immunoglobulin domain [PF13895.8, score=76.5]; Immunoglobulin domain [PF00047.27, score=62.7]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=46.6]; Immunoglobulin V-set domain [PF07686.19, score=46.0]} {Human: ENSG00000177103, DSCAML1, DS cell adhesion molecule like 1, [RH, Score=238, Expect=3e-62]} {Mouse: ENSMUSG00000032087, Dscaml1, DS cell adhesion molecule like 1, [RH, Score=239, Expect=2e-62]} {Dmel: FBgn0263219, Dscam4, Down syndrome cell adhesion molecule 4, [Score=218, Expect=3e-56]} {Celegans: WBGene00004215, ptp-3, Tyrosine-protein phosphatase Lar-like, [Score=83.2, Expect=2e-15]} {Smed: dd_Smed_v6_3024_0_1, dd_Smed_v6_3024_0_1, [RH, Score=330, Expect=1e-90]} {RNA1509_2497, RNA1509_37795} {RNA1310_1245.1, RNA1509_2497, RNA1509_37795} {RNA1509_2497, RNA1509_37795, RNA815_4978}
16.	MligTC455_02514	3340	69.57	Mlig455_054529, Mlig455_055382	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.569 Regeneration-downregulated BL: -1.952 Regeneration-depleted BL: -1.952		0.954	-	-	-	-	0.954	-	Mlig455_054529 {REF} {Length: 3755} {TRANSSPLICED} {Pfam: Glycine-rich domain-containing protein-like [PF07173.14, score=151.6]} {Celegans: WBGene00017980, F32B5.7, [RH, Score=270, Expect=2e-78]} {Smed: dd_Smed_v6_5132_0_1, dd_Smed_v6_5132_0_1, [RH, Score=385, Expect=1e-121]} {RNA1509_33373} {RNA1310_7934.1, RNA1509_33373} {RNA1509_33373, RNA815_2330} Mlig455_055382 {REF} {Length: 3676} {Pfam: Glycine-rich domain-containing protein-like [PF07173.14, score=150.3]} {Celegans: WBGene00017980, F32B5.7, [RH, Score=269, Expect=3e-78]} {Smed: dd_Smed_v6_5132_0_1, dd_Smed_v6_5132_0_1, [RH, Score=383, Expect=5e-121]} {RNA1509_5401} {RNA1310_7934.1} {RNA815_2330}
17.	MligTC455_53239	733	15.27	Mlig455_025537	Neo: - Age: - Region-specific R2: 4.434 Region-enriched R2: 3.108/0.00000		0.951	-	-	-	-	0.951	-	Mlig455_025537 {REF} {Length: 964} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=28.0]} {Dmel: FBgn0051221, CG31221, [RH, Score=70.9, Expect=5e-15]} {Celegans: WBGene00010290, F58H1.7, [Score=63.9, Expect=8e-13]} {Smed: dd_Smed_v6_5576_0_1, dd_Smed_v6_5576_0_1, [RH, Score=168, Expect=2e-53]} {RNA1509_58542} {RNA1310_40950} {RNA815_19778.1}

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