Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_24477 | 7 | 0.14 | Mlig455_006010 | Neo: - Age: - |
Mlig455_006010 {REF} {Length: 1200} {RNA1509_38999} {RNA1310_129006} {RNA815_22011} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -2.135 | 0.677 | 0.99991 | 1.00000 | |
RegionR2 | 0.302 | 0.677 | 0.99989 | 1.00000 | |
RegionR3 | 1.087 | 0.677 | 0.64323 | 1.00000 | |
RegionR4 | -2.585 | 0.677 | 1.00000 | 1.00000 | |
RegionR5 | 3.221 | 0.677 | 0.49172 | 0.85500 | |
RegionR6 | 1.036 | 0.677 | 0.72837 | 1.00000 | |
RegionR7 | -0.54 | 0.677 | 1.00000 | 1.00000 | |
RegionR8 | -0.387 | 0.677 | 1.00000 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 1.587 | 0.677 | 0.99986 | 1.00000 | |
RegenerationR2 | 0.254 | 0.677 | 1.00000 | 1.00000 | |
RegenerationR3 | 1.239 | 0.677 | 0.89857 | 1.00000 | |
RegenerationR4 | 1.043 | 0.677 | 1.00000 | 1.00000 | |
RegenerationR5 | -2.356 | 0.677 | 0.81458 | 0.99287 | |
RegenerationR6 | -1.113 | 0.677 | 0.74888 | 0.95155 | |
RegenerationBL | -0.224 | 0.677 | 1.00000 | 1.00000 | |
RegenerationTP | 0.365 | 0.677 | 0.99995 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_24477 | 7 | 0.14 | Mlig455_006010 | Neo: - Age: - |
2 | 1.000 | - | - | - | 1.000 | - | Mlig455_006010 {REF} {Length: 1200} {RNA1509_38999} {RNA1310_129006} {RNA815_22011} | |
2. | MligTC455_51133 | 88 | 1.84 | Mlig455_069320 | Neo: Irradiation Age: logFC(26M/2M)=0.963 |
0.998 | 0.998 | - | - | - | - | - | Mlig455_069320 {REF} {Length: 1727} {RNA1509_1239, RNA1509_3377, RNA1509_42} {RNA1310_10769, RNA1509_1239, RNA1509_3377} {RNA1509_1239, RNA1509_3377, RNA815_3639} | |
3. | MligTC455_28494 | 11 | 0.23 | Mlig455_059683 | Neo: - Age: - |
SVOP | 0.989 | - | - | - | - | 0.989 | - | Mlig455_059683 {REF} {Length: 1069} {Pfam: Sugar (and other) transporter [PF00083.26, score=53.6]; Major Facilitator Superfamily [PF07690.18, score=45.6]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=126, Expect=4e-32]; ENSG00000157703, SVOPL, SVOP like, [Score=121, Expect=2e-31]} {Mouse: ENSMUSG00000029830, Svopl, SV2 related protein homolog (rat)-like, [Score=116, Expect=9e-29]; ENSMUSG00000042078, Svop, SV2 related protein, [Score=115, Expect=2e-28]} {Dmel: FBgn0259164, CG42269, [Score=68.6, Expect=1e-12]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=103, Expect=1e-24]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=139, Expect=2e-37]} {RNA1310_64118} {RNA815_42378} |
4. | MligTC455_12694 | 7 | 0.14 | Mlig455_037384 | Neo: - Age: - |
0.981 | - | - | - | - | 0.981 | - | Mlig455_037384 {REF} {Length: 884} {RNA1310_22051} {RNA815_28288} | |
5. | MligTC455_22354 | 65 | 1.35 | Mlig455_009895, Mlig455_057001, Mlig455_057061 | Neo: - Age: logFC(26M/2M)=0.575 |
EIF2B3, PPM1A | 0.981 | 0.981 | - | - | - | - | - | Mlig455_009895 {REF} {Length: 1696} {TRANSSPLICED} {Pfam: MobA-like NTP transferase domain [PF12804.9, score=34.3]; Nucleotidyl transferase [PF00483.25, score=31.3]; Domain of unknown function (DUF4954) [PF16314.7, score=23.8]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=20.2]} {Human: ENSG00000070785, EIF2B3, eukaryotic translation initiation factor 2B subunit gamma, [Score=111, Expect=5e-26]} {Mouse: ENSMUSG00000028683, Eif2b3, eukaryotic translation initiation factor 2B, subunit 3, [Score=124, Expect=1e-30]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [RH, Score=139, Expect=4e-36]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=72.0, Expect=2e-13]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116} Mlig455_057001 {REF} {Length: 983} {Pfam: Domain of unknown function (DUF4954) [PF16314.7, score=25.6]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=23.3]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [Score=73.6, Expect=2e-14]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.2, Expect=8e-14]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116} Mlig455_057061 {REF} {Length: 1331} {Pfam: Domain of unknown function (DUF4954) [PF16314.7, score=24.3]; Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=21.9]} {Human: ENSG00000100614, PPM1A, protein phosphatase, Mg2+/Mn2+ dependent 1A, [Score=50.1, Expect=4e-07]; ENSG00000138032, PPM1B, protein phosphatase, Mg2+/Mn2+ dependent 1B, [Score=48.9, Expect=1e-05]; ENSG00000285542, AC013717.1, novel protein, PPM1B-SLC3A1 readthrough, [Score=48.5, Expect=1e-05]} {Mouse: ENSMUSG00000021096, Ppm1a, protein phosphatase 1A, magnesium dependent, alpha isoform, [Score=52.0, Expect=7e-07]; ENSMUSG00000061130, Ppm1b, protein phosphatase 1B, magnesium dependent, beta isoform, [Score=49.7, Expect=4e-06]} {Dmel: FBgn0034029, eIF2Bgamma, eukaryotic translation initiation factor 2B subunit gamma, [Score=75.1, Expect=2e-14]} {Celegans: WBGene00004090, eif-2Bgamma, Probable translation initiation factor eIF-2B subunit gamma, [RH, Score=71.2, Expect=2e-13]} {Smed: dd_Smed_v6_2275_0_1, dd_Smed_v6_2275_0_1, [Score=61.6, Expect=2e-10]} {RNA1509_11665} {RNA1310_17674} {RNA815_11116} |
6. | MligTC455_54103 | 21 | 0.43 | Mlig455_052513 | Neo: - Age: logFC(26M/2M)=0.666 |
0.981 | - | - | - | - | 0.981 | - | Mlig455_052513 {REF} {Length: 1830} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834} | |
7. | MligTC455_33741 | 37 | 0.78 | Mlig455_044429, Mlig455_044463, Mlig455_046755 | Neo: - Age: - |
CLK2, CLK3 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_044429 {REF} {Length: 2988} {Pfam: Protein kinase domain [PF00069.27, score=166.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.7]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=460, Expect=4e-157]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=442, Expect=3e-148]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=480, Expect=2e-151]} {Celegans: WBGene00006517, madd-3, [Score=416, Expect=1e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=496, Expect=2e-168]} {RNA1509_52185} {RNA1310_8105} {RNA815_38317} Mlig455_044463 {REF} {Length: 3058} {Pfam: Protein kinase domain [PF00069.27, score=166.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.6]} {Human: ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=437, Expect=6e-146]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=456, Expect=2e-155]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=436, Expect=1e-145]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=465, Expect=6e-158]} {Celegans: WBGene00006517, madd-3, [Score=414, Expect=9e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=488, Expect=7e-165]} {RNA1509_52185} {RNA1310_8105, RNA1509_52185} {RNA1509_52185, RNA815_38317} Mlig455_046755 {REF} {Length: 2356} {Pfam: Protein kinase domain [PF00069.27, score=166.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=77.7]} {Human: ENSG00000176444, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000261893, CLK2, CDC like kinase 2, [RH, Score=457, Expect=9e-156]; ENSG00000179335, CLK3, CDC like kinase 3, [RH, Score=444, Expect=1e-148]} {Mouse: ENSMUSG00000068917, Clk2, CDC-like kinase 2, [RH, Score=460, Expect=4e-157]; ENSMUSG00000032316, Clk3, CDC-like kinase 3, [RH, Score=442, Expect=3e-148]} {Dmel: FBgn0265998, Doa, Darkener of apricot, [RH, Score=480, Expect=2e-151]} {Celegans: WBGene00006517, madd-3, [Score=416, Expect=1e-141]} {Smed: dd_Smed_v6_8461_0_1, dd_Smed_v6_8461_0_1, [Score=496, Expect=2e-168]} {RNA1509_52185} {RNA1310_8105} {RNA815_38317} |
8. | MligTC455_52525 | 79 | 1.64 | Mlig455_059764 | Neo: - Age: Down-Down-Down |
0.96 | - | - | - | - | 0.960 | - | Mlig455_059764 {REF} {Length: 1984} {TRANSSPLICED} {RNA1509_39451} {RNA1310_39324} {RNA815_6430} | |
9. | MligTC455_09252 | 9 | 0.18 | Mlig455_059200 | Neo: - Age: - |
NFIB | 0.958 | - | - | - | - | 0.958 | - | Mlig455_059200 {REF} {Length: 4411} {Human: ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=94.7, Expect=2e-19]; ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=93.2, Expect=5e-19]; ENSG00000008441, NFIX, nuclear factor I X, [RH, Score=93.2, Expect=4e-19]} {Mouse: ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=94.7, Expect=1e-19]; ENSMUSG00000001911, Nfix, nuclear factor I/X, [RH, Score=92.4, Expect=4e-19]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=91.7, Expect=1e-18]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=98.6, Expect=7e-21]} {Smed: dd_Smed_v6_7403_0_1, dd_Smed_v6_7403_0_1, [Score=156, Expect=4e-39]} {RNA1509_25355} {RNA1310_32384} {RNA815_37528} |
10. | MligTC455_19020 | 44 | 0.92 | Mlig455_009038 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_009038 {REF} {Length: 886} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_84931} | |
11. | MligTC455_19242 | 575 | 11.98 | Mlig455_022261 | Neo: Irradiation Age: - Region-enriched R3: 2.932/0.00000 |
0.954 | - | - | - | - | 0.954 | - | Mlig455_022261 {REF} {Length: 2390} {RNA1509_2718} {RNA1310_486.1} {RNA815_161} | |
12. | MligTC455_19005 | 27 | 0.55 | Mlig455_033827 | Neo: - Age: - Region-enriched R4: 6.306/0.00129 |
0.953 | - | - | - | - | 0.953 | - | Mlig455_033827 {REF} {Length: 647} {NoTransDecoderORF} {RNA1310_41003.1} {RNA815_28385} | |
13. | MligTC455_50880 | 62 | 1.29 | Mlig455_030024 | Neo: - Age: Up-Down-Down |
0.95 | - | - | - | - | 0.950 | - | Mlig455_030024 {REF} {Length: 1372} {NoTransDecoderORF} {RNA1509_52070} {RNA1310_36138.2} {RNA815_52876} |