Data search


search
Exact
Search

Results for MligTC455_50880

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50880 62 1.29 Mlig455_030024

Neo: -

Age: Up-Down-Down

Mlig455_030024 {REF} {Length: 1372} {NoTransDecoderORF} {RNA1509_52070} {RNA1310_36138.2} {RNA815_52876}

Cumulative graph for MligTC455_50880

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.851 1.505 0.09170 0.65088
RegionR2 1.498 1.505 0.32849 0.72052
RegionR3 0.928 1.505 0.39967 0.92806
RegionR4 -1.37 1.505 0.99866 1.00000
RegionR5 0.327 1.505 0.80208 1.00000
RegionR6 1.484 1.505 0.18397 0.74848
RegionR7 2.273 1.505 0.07583 0.53146
RegionR8 1.71 1.505 0.31044 0.94314

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.832 1.505 0.99986 1.00000
RegenerationR2 -0.306 1.505 0.46176 0.85323
RegenerationR3 1.948 1.505 0.10002 0.50389
RegenerationR4 0.663 1.505 0.47251 0.85483
RegenerationR5 1.233 1.505 0.16045 0.58373
RegenerationR6 0.284 1.505 0.72720 0.93977
RegenerationBL -1.958 1.505 0.52196 0.88321
RegenerationTP 1.911 1.505 0.14875 0.57294


Genes with expression patterns similar to MligTC455_50880

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50880 62 1.29 Mlig455_030024

Neo: -

Age: Up-Down-Down

4 1.000 1.000 - - 1.000 1.000 Mlig455_030024 {REF} {Length: 1372} {NoTransDecoderORF} {RNA1509_52070} {RNA1310_36138.2} {RNA815_52876}
2. MligTC455_15590 55 1.14 Mlig455_054938

Neo: -

Age: Down-Up-Up

1.686 0.956 - - - 0.730 - Mlig455_054938 {REF} {Length: 3537} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=57.1]} {Celegans: WBGene00007064, 2RSSE.1, [RH, Score=129, Expect=4e-33]} {Smed: dd_Smed_v6_6099_0_1, dd_Smed_v6_6099_0_1, [RH, Score=260, Expect=4e-79]} {RNA1509_9501} {RNA1310_8454, RNA1509_9501} {RNA1509_9501, RNA815_6408}
3. MligTC455_14906 14 0.28 Mlig455_029106

Neo: Int S/G2/M

Age: -

0.987 - - - - 0.987 - Mlig455_029106 {REF} {Length: 2911} {RNA1310_111263}
4. MligTC455_06410 24 0.51 Mlig455_003490, Mlig455_015568

Neo: -

Age: -

0.975 - - - - 0.975 -

Mlig455_003490 {REF} {Length: 598} {NoTransDecoderORF} {RNA1310_67261} {RNA815_43380}

Mlig455_015568 {REF} {Length: 819} {NoTransDecoderORF} {RNA1310_67261} {RNA815_43380}
5. MligTC455_19005 27 0.55 Mlig455_033827

Neo: -

Age: -

Region-enriched R4: 6.306/0.00129
Region-enriched R5: 3.009/0.01229

0.972 - - - - 0.972 - Mlig455_033827 {REF} {Length: 647} {NoTransDecoderORF} {RNA1310_41003.1} {RNA815_28385}
6. MligTC455_48357 48 1.01 Mlig455_021015

Neo: -

Age: Up-Down-Up

MAP3K19 0.966 0.966 - - - - - Mlig455_021015 {REF} {Length: 4743} {Pfam: Protein kinase domain [PF00069.27, score=195.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=142.5]; Ankyrin repeats (3 copies) [PF12796.9, score=91.2]; Ankyrin repeats (many copies) [PF13857.8, score=70.4]; Ankyrin repeat [PF13606.8, score=69.4]; Ankyrin repeat [PF00023.32, score=63.1]; Ankyrin repeats (many copies) [PF13637.8, score=54.3]; ABC1 atypical kinase-like domain [PF03109.18, score=31.5]; Fungal protein kinase [PF17667.3, score=22.4]; Kinase-like [PF14531.8, score=20.9]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=164, Expect=7e-41]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=169, Expect=2e-42]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=145, Expect=4e-36]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=142, Expect=8e-35]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=157, Expect=2e-39]} {RNA1509_9426} {RNA1310_28637} {RNA815_34578}
7. MligTC455_52705 53 1.11 Mlig455_028618

Neo: -

Age: -

POLL 0.966 0.966 - - - - - Mlig455_028618 {REF} {Length: 2835} {TRANSSPLICED} {Pfam: DNA polymerase beta palm [PF14792.8, score=111.4]; Fingers domain of DNA polymerase lambda [PF10391.11, score=71.1]; DNA polymerase beta thumb [PF14791.8, score=66.2]; Helix-hairpin-helix domain [PF14716.8, score=24.7]; Helix-hairpin-helix domain [PF14520.8, score=19.2]} {Human: ENSG00000166169, POLL, DNA polymerase lambda, [RH, Score=332, Expect=3e-108]} {Mouse: ENSMUSG00000025218, Poll, polymerase (DNA directed), lambda, [RH, Score=325, Expect=2e-104]} {RNA1509_54161} {RNA1310_11366.1} {RNA815_6646.1}
8. MligTC455_42523 77 1.6 Mlig455_011207

Neo: -

Age: -

0.963 0.963 - - - - - Mlig455_011207 {REF} {Length: 1339} {NoTransDecoderORF}
9. MligTC455_39618 251 5.22 Mlig455_052942

Neo: -

Age: -

Region-enriched R4: 3.069/0.01891
Region-enriched R5: 2.396/0.01715

MPP6 0.96 0.960 - - - - - Mlig455_052942 {REF} {Length: 3174} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=123.6]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=29.1]; PDZ domain [PF00595.26, score=28.2]; L27 domain [PF02828.18, score=24.5]; Variant SH3 domain [PF14604.8, score=22.5]; PDZ domain [PF17820.3, score=21.5]; AAA ATPase domain [PF13191.8, score=20.6]} {Human: ENSG00000105926, MPP6, membrane palmitoylated protein 6, [RH, Score=345, Expect=1e-112]} {Mouse: ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=357, Expect=1e-115]} {Dmel: FBgn0250785, vari, varicose, [RH, Score=323, Expect=3e-102]} {Celegans: WBGene00002991, lin-2, [Score=273, Expect=5e-83]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [RH, Score=416, Expect=4e-138]} {RNA1509_20995} {RNA1310_12223.1} {RNA815_10039}
10. MligTC455_14986 48 1.01 Mlig455_003695, Mlig455_003899

Neo: -

Age: -

0.959 0.959 - - - - -

Mlig455_003695 {REF} {Length: 897} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_85928}

Mlig455_003899 {REF} {Length: 107} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_85928}
11. MligTC455_28472 95 1.99 Mlig455_027357

Neo: -

Age: -

JPH3 0.959 0.959 - - - - - Mlig455_027357 {REF} {Length: 4050} {Pfam: MORN repeat [PF02493.22, score=88.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.0]} {Human: ENSG00000154118, JPH3, junctophilin 3, [RH, Score=391, Expect=2e-122]} {Mouse: ENSMUSG00000025318, Jph3, junctophilin 3, [RH, Score=391, Expect=1e-122]} {Dmel: FBgn0032129, jp, junctophilin, [RH, Score=386, Expect=1e-117]} {Celegans: WBGene00002179, jph-1, JunctoPHilin, [RH, Score=379, Expect=4e-118]} {Smed: dd_Smed_v6_4752_0_1, dd_Smed_v6_4752_0_1, [RH, Score=516, Expect=6e-169]} {RNA1509_50399} {RNA1310_28126} {RNA815_32733}
12. MligTC455_39693 41 0.86 Mlig455_063193

Neo: -

Age: Up-Down-Down

MTCL1 0.957 0.957 - - - - - Mlig455_063193 {REF} {Length: 6739} {Pfam: Protein SOGA [PF11365.10, score=34.5]; Chromatin assembly factor 1 complex p150 subunit, N-terminal [PF11600.10, score=21.5]; Myosin-like coiled-coil protein [PF09728.11, score=20.0]; Growth-arrest specific micro-tubule binding [PF13851.8, score=19.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.6]; Fez1 [PF06818.17, score=19.3]} {Human: ENSG00000168502, MTCL1, microtubule crosslinking factor 1, [RH, Score=102, Expect=6e-21]; ENSG00000149639, SOGA1, suppressor of glucose, autophagy associated 1, [RH, Score=101, Expect=1e-20]} {Mouse: ENSMUSG00000055485, Soga1, suppressor of glucose, autophagy associated 1, [RH, Score=109, Expect=2e-23]; ENSMUSG00000052105, Mtcl1, microtubule crosslinking factor 1, [RH, Score=108, Expect=7e-23]} {Dmel: FBgn0031869, CG18304, [RH, Score=89.7, Expect=2e-17]} {Celegans: WBGene00044079, tag-241, [Score=143, Expect=5e-34]} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [Score=322, Expect=7e-89]} {RNA1509_19671} {RNA1310_1157, RNA1509_19671} {RNA1509_19671, RNA815_16429}
13. MligTC455_47146 157 3.28 Mlig455_053968

Neo: -

Age: logFC(26M/2M)=-0.429

Region-enriched R4: 3.868/0.00961

TTC24 0.957 0.957 - - - - - Mlig455_053968 {REF} {Length: 4078} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=74.2]; Tetratricopeptide repeat [PF07719.19, score=57.5]; Tetratricopeptide repeat [PF00515.30, score=50.0]; Tetratricopeptide repeat [PF13176.8, score=49.3]; Tetratricopeptide repeat [PF13181.8, score=31.7]} {Human: ENSG00000187862, TTC24, tetratricopeptide repeat domain 24, [RH, Score=103, Expect=3e-22]} {Mouse: ENSMUSG00000051036, Ttc24, tetratricopeptide repeat domain 24, [RH, Score=67.8, Expect=1e-11]} {RNA1509_7768} {RNA1310_13043} {RNA815_789.1}
14. MligTC455_08927 5 0.1 Mlig455_047068

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_047068 {REF} {Length: 303} {NoTransDecoderORF}
15. MligTC455_13555 95 1.97 Mlig455_019079

Neo: Int S/G2/M

Age: -

COA7 0.956 0.956 - - - - - Mlig455_019079 {REF} {Length: 1418} {Pfam: Sel1 repeat [PF08238.14, score=23.3]} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [Score=48.9, Expect=2e-06]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [Score=46.6, Expect=1e-05]} {Dmel: FBgn0039965, CG13865, [RH, Score=66.2, Expect=2e-12]} {RNA1509_45906} {RNA1310_37650.1} {RNA815_47606}
16. MligTC455_18412 142 2.96 Mlig455_013438

Neo: -

Age: -

WDR41 0.956 0.956 - - - - - Mlig455_013438 {REF} {Length: 2509} {Pfam: WD domain, G-beta repeat [PF00400.34, score=31.8]} {Human: ENSG00000164253, WDR41, WD repeat domain 41, [RH, Score=60.1, Expect=3e-09]} {Mouse: ENSMUSG00000042015, Wdr41, WD repeat domain 41, [Score=56.6, Expect=3e-08]} {RNA1509_34814} {RNA1310_18965} {RNA815_22933}
17. MligTC455_38257 159 3.31 Mlig455_012808, Mlig455_047421, Mlig455_070483

Neo: -

Age: -

0.954 0.954 - - - - -

Mlig455_012808 {REF} {Length: 4065} {RNA1310_64880}

Mlig455_047421 {REF} {Length: 6870} {RNA1509_15668} {RNA1310_64880} {RNA815_39775}

Mlig455_070483 {REF} {Length: 3618} {RNA1310_64880}
18. MligTC455_18572 145 3.02 Mlig455_056904

Neo: -

Age: -

INTS14 0.953 0.953 - - - - - Mlig455_056904 {REF} {Length: 2480} {TRANSSPLICED} {Pfam: Integrator complex subunit 14 [PF19435.1, score=215.8]; von Willebrand factor type A domain [PF13519.8, score=37.1]} {Human: ENSG00000138614, INTS14, integrator complex subunit 14, [RH, Score=219, Expect=2e-64]} {Mouse: ENSMUSG00000034263, Ints14, integrator complex subunit 14, [RH, Score=220, Expect=4e-65]} {Dmel: FBgn0031314, IntS14, Integrator 14, [RH, Score=147, Expect=5e-38]} {Smed: dd_Smed_v6_10096_0_1, dd_Smed_v6_10096_0_1, [RH, Score=81.6, Expect=2e-16]} {RNA1509_36716} {RNA1310_3852.1, RNA1509_36716} {RNA1509_36716, RNA815_12770}
19. MligTC455_27544 39 0.81 Mlig455_032949

Neo: -

Age: -

TRPM3 0.953 0.953 - - - - - Mlig455_032949 {REF} {Length: 6125} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=51.9]; Ankyrin repeats (many copies) [PF13637.8, score=39.2]; Ankyrin repeat [PF13606.8, score=30.5]; Ankyrin repeats (many copies) [PF13857.8, score=27.8]; Ankyrin repeat [PF00023.32, score=26.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=75.9, Expect=4e-13]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.7, Expect=1e-19]} {RNA1509_21241} {RNA1310_1739} {RNA815_2547.1}
20. MligTC455_49982 212 4.41 Mlig455_022747

Neo: -

Age: Down-Up-Down

0.953 0.953 - - - - - Mlig455_022747 {REF} {Length: 2014} {TRANSSPLICED} {Pfam: Fz domain [PF01392.24, score=24.5]; Stretch-activated Ca2+-permeable channel component [PF12929.9, score=19.5]} {Smed: dd_Smed_v6_11002_0_1, dd_Smed_v6_11002_0_1, [Score=61.6, Expect=2e-11]} {RNA1509_26308} {RNA1310_12484} {RNA815_6287.1}
21. MligTC455_52319 228 4.76 Mlig455_021474, Mlig455_063234, Mlig455_067359

Neo: -

Age: Down-Up-Down

Region-enriched R4: 3.056/0.03841

0.952 0.952 - - - - -

Mlig455_021474 {REF} {Length: 1135} {RNA1509_6241} {RNA1310_26979} {RNA815_23904}

Mlig455_063234 {REF} {Length: 915} {RNA1509_6241} {RNA1310_26979} {RNA815_23904}

Mlig455_067359 {REF} {Length: 794} {RNA1310_26979} {RNA815_23904}
22. MligTC455_16477 427 8.9 Mlig455_042989

Neo: -

Age: Down-Up-Down

ARF6 0.951 0.951 - - - - - Mlig455_042989 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=111.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.3]; 6-phosphofructo-2-kinase [PF01591.20, score=18.8]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [Score=148, Expect=7e-46]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [Score=148, Expect=5e-46]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [Score=149, Expect=1e-46]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=142, Expect=7e-44]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [Score=135, Expect=2e-41]} {RNA1509_12815} {RNA1310_25955} {RNA815_11670.2}
23. MligTC455_17687 82 1.71 Mlig455_001571

Neo: -

Age: -

0.951 0.951 - - - - - Mlig455_001571 {REF} {Length: 2658} {RNA1509_40906} {RNA1310_29293} {RNA815_40335}
24. MligTC455_45043 50 1.05 Mlig455_015382

Neo: Int S/G2/M

Age: -

FANCI 0.951 0.951 - - - - - Mlig455_015382 {REF} {Length: 5579} {TRANSSPLICED} {Pfam: FANCI solenoid 4 [PF14678.8, score=99.8]; FANCI solenoid 2 [PF14676.8, score=87.0]; FANCI helical domain 2 [PF14680.8, score=79.4]; FANCI solenoid 1 [PF14675.8, score=68.0]; FANCI helical domain 1 [PF14679.8, score=26.8]} {Human: ENSG00000140525, FANCI, FA complementation group I, [RH, Score=169, Expect=8e-42]} {Mouse: ENSMUSG00000039187, Fanci, Fanconi anemia, complementation group I, [RH, Score=190, Expect=3e-48]} {Smed: dd_Smed_v6_8024_0_1, dd_Smed_v6_8024_0_1, [Score=60.1, Expect=1e-08]} {RNA1509_14043, RNA1509_46132} {RNA1310_3141, RNA1509_14043, RNA1509_46132} {RNA1509_14043, RNA1509_46132, RNA815_12076}
25. MligTC455_24477 7 0.14 Mlig455_006010

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_006010 {REF} {Length: 1200} {RNA1509_38999} {RNA1310_129006} {RNA815_22011}
26. MligTC455_33759 388 8.09 Mlig455_016906

Neo: -

Age: -

ZNF28 0.95 0.950 - - - - - Mlig455_016906 {REF} {Length: 2132} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=98.9]; C2H2-type zinc finger [PF13894.8, score=66.8]; Zinc finger, C2H2 type [PF00096.28, score=65.0]; C2H2-type zinc finger [PF13912.8, score=36.8]; Zinc-finger of C2H2 type [PF12874.9, score=29.8]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=23.2]; Zinc ribbon domain [PF09723.12, score=22.5]; BED zinc finger [PF02892.17, score=22.1]; Zinc-finger domain [PF10276.11, score=21.6]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=20.7]} {Human: ENSG00000198538, ZNF28, zinc finger protein 28, [Score=155, Expect=6e-43]; ENSG00000278091, ZNF85, zinc finger protein 85, [Score=153, Expect=2e-42]; ENSG00000233757, AC092835.1, novel C2H2 type zinc finger protein, [Score=153, Expect=1e-42]; ENSG00000159917, ZNF235, zinc finger protein 235, [Score=152, Expect=1e-41]; ENSG00000136866, ZFP37, ZFP37 zinc finger protein, [Score=152, Expect=7e-42]; ENSG00000184635, ZNF93, zinc finger protein 93, [Score=152, Expect=1e-41]; ENSG00000105750, ZNF85, zinc finger protein 85, [Score=152, Expect=2e-42]; ENSG00000213793, ZNF888, zinc finger protein 888, [Score=151, Expect=3e-41]; ENSG00000018869, ZNF582, zinc finger protein 582, [Score=149, Expect=4e-41]; ENSG00000197863, ZNF790, zinc finger protein 790, [Score=149, Expect=2e-40]; ENSG00000198453, ZNF568, zinc finger protein 568, [Score=149, Expect=2e-42]; ENSG00000188283, ZNF383, zinc finger protein 383, [Score=148, Expect=3e-41]; ENSG00000167562, ZNF701, zinc finger protein 701, [Score=148, Expect=3e-41]; ENSG00000196081, ZNF724, zinc finger protein 724, [Score=148, Expect=2e-40]} {Mouse: ENSMUSG00000028389, Zfp37, zinc finger protein 37, [Score=151, Expect=9e-42]; ENSMUSG00000047603, Zfp235, zinc finger protein 235, [Score=148, Expect=2e-40]; ENSMUSG00000067942, Zfp160, zinc finger protein 160, [Score=146, Expect=1e-39]; ENSMUSG00000099689, Zfp383, zinc finger protein 383, [Score=145, Expect=4e-40]; ENSMUSG00000063894, Zkscan8, zinc finger with KRAB and SCAN domains 8, [Score=145, Expect=7e-40]; ENSMUSG00000074733, Zfp950, zinc finger protein 950, [Score=144, Expect=3e-39]; ENSMUSG00000011427, Zfp790, zinc finger protein 790, [Score=144, Expect=5e-39]; ENSMUSG00000078768, Zfp566, zinc finger protein 566, [Score=144, Expect=2e-40]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=134, Expect=2e-35]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=117, Expect=7e-31]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=127, Expect=9e-35]} {RNA1509_12248} {RNA1310_24454} {RNA815_26833}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA