Data search


search
Exact
Search

Results for MligTC455_24494

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24494 770 16.03 Mlig455_038083

Neo: -

Age: -

Region-enriched R8: 2.315/0.00008
Region-enriched R7: 1.860/0.00049
Region-enriched R6: 1.497/0.00343

Mlig455_038083 {REF} {Length: 1727} {RNA1509_9617} {RNA1310_27283} {RNA815_11447.1}

Cumulative graph for MligTC455_24494

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.64 4.01 0.60837 1.00000
RegionR2 -3.857 4.01 0.00000 0.00000
RegionR3 -1.012 4.01 0.02862 0.28983
RegionR4 0.448 4.01 0.36042 0.68321
RegionR5 -0.61 4.01 0.17002 0.43880
RegionR6 1.497 4.01 0.00003 0.00343
RegionR7 1.86 4.01 0.00001 0.00049
RegionR8 2.315 4.01 0.00000 0.00008

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.526 4.01 0.16460 0.90707
RegenerationR2 -0.975 4.01 0.19915 0.64514
RegenerationR3 -0.488 4.01 0.35510 0.77340
RegenerationR4 -0.739 4.01 0.13306 0.55107
RegenerationR5 0.486 4.01 0.30914 0.73526
RegenerationR6 -1.144 4.01 0.00941 0.11935
RegenerationBL -0.52 4.01 0.21326 0.55767
RegenerationTP -0.411 4.01 0.34619 0.78789


Genes with expression patterns similar to MligTC455_24494

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24494 770 16.03 Mlig455_038083

Neo: -

Age: -

Region-enriched R8: 2.315/0.00008
Region-enriched R7: 1.860/0.00049
Region-enriched R6: 1.497/0.00343

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_038083 {REF} {Length: 1727} {RNA1509_9617} {RNA1310_27283} {RNA815_11447.1}
2. MligTC455_24493 1599 33.31 Mlig455_019963, Mlig455_026408

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=-0.516

Region-enriched R8: 2.238/0.00001
Region-enriched R7: 2.226/0.00000
Region-enriched R6: 1.588/0.00174

5.939 0.984 0.986 0.975 0.996 0.999 0.999

Mlig455_019963 {REF} {Length: 1390} {RNA1509_9617} {RNA1310_23758.1} {RNA815_11447.1}

Mlig455_026408 {REF} {Length: 2438} {RNA1509_9617} {RNA1310_23758.1, RNA1509_9617} {RNA1509_9617, RNA815_11447.1}
3. MligTC455_24495 699 14.55 Mlig455_026411

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.047

Region-enriched R8: 6.835/0.00000
Region-enriched R7: 6.400/0.00000
Region-enriched R6: 4.047/0.00024

4.41 0.962 0.928 0.750 0.818 - 0.952 Mlig455_026411 {REF} {Length: 1134} {RNA1509_9617} {RNA1310_33732} {RNA815_14842}
4. MligTC455_42626 3871 80.64 Mlig455_022010, Mlig455_022016, Mlig455_058844

Neo: -

Age: -

Region-enriched R8: 5.333/0.00000
Region-enriched R7: 4.594/0.00000
Region-enriched R6: 3.669/0.00000

NGFR 4.403 0.961 0.943 0.900 - 0.772 0.827

Mlig455_022010 {REF} {Length: 2807} {Pfam: Death domain [PF00531.24, score=43.7]; TNFR/NGFR cysteine-rich region [PF00020.20, score=39.8]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.9]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=21.0]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [RH, Score=87.4, Expect=7e-18]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [RH, Score=90.9, Expect=3e-19]} {RNA1509_51303} {RNA1310_14301} {RNA815_11451.1}

Mlig455_022016 {REF} {Length: 2180} {Pfam: Death domain [PF00531.24, score=43.4]; TNFR/NGFR cysteine-rich region [PF00020.20, score=36.4]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.6]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [Score=88.2, Expect=4e-18]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [Score=58.9, Expect=8e-09]} {RNA1509_53598} {RNA1310_15008} {RNA815_11451.1}

Mlig455_058844 {REF} {Length: 2237} {Pfam: Death domain [PF00531.24, score=43.5]; TNFR/NGFR cysteine-rich region [PF00020.20, score=37.8]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=33.9]} {Human: ENSG00000064300, NGFR, nerve growth factor receptor, [RH, Score=96.3, Expect=7e-21]} {Mouse: ENSMUSG00000000120, Ngfr, nerve growth factor receptor (TNFR superfamily, member 16), [RH, Score=99.4, Expect=5e-22]} {RNA1509_26617} {RNA1310_14301} {RNA815_26191}
5. MligTC455_33229 34920 727.49 Mlig455_061272

Neo: -

Age: logFC(26M/2M)=-0.783

Region-enriched R8: 1.666/0.00844
Region-enriched R7: 1.503/0.01343

2.757 0.955 0.939 0.863 - - - Mlig455_061272 {REF} {Length: 1026} {RNA1509_246} {RNA1310_75727, RNA1509_246} {RNA1509_246, RNA815_1838.2}
6. MligTC455_33231 33622 700.45 Mlig455_062658

Neo: -

Age: -

Region-enriched R7: 1.251/0.01752

2.691 0.921 0.955 0.815 - - - Mlig455_062658 {REF} {Length: 2031} {RNA1509_246} {RNA1310_41757} {RNA815_21479}
7. MligTC455_33230 33481 697.51 Mlig455_022623, Mlig455_061302

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.463

Region-enriched R7: 1.263/0.01617

2.687 0.920 0.954 0.813 - - -

Mlig455_022623 {REF} {Length: 1193} {NoTransDecoderORF} {RNA1310_117584}

Mlig455_061302 {REF} {Length: 655} {RNA1509_713} {RNA1310_75727} {RNA815_17246}
8. MligTC455_22230 170 3.54 Mlig455_013703, Mlig455_013720

Neo: -

Age: Down-Up-Down

Region-enriched R8: 5.137/0.00004
Region-enriched R7: 5.134/0.00000
Region-enriched R6: 3.126/0.00746

2.644 - - - 0.886 0.804 0.954

Mlig455_013703 {REF} {Length: 2025} {RNA1509_49155} {RNA1310_23836, RNA1509_49155} {RNA1509_49155, RNA815_28676}

Mlig455_013720 {REF} {Length: 2031} {RNA1509_49155} {RNA1310_23836} {RNA815_28676}
9. MligTC455_41193 242 5.03 Mlig455_021133

Neo: -

Age: Down-Up-Up

Region-enriched R8: 7.101/0.01716

2.57 0.834 - - 0.782 - 0.954 Mlig455_021133 {REF} {Length: 1148} {RNA1310_28844} {RNA815_36557}
10. MligTC455_52171 137 2.86 Mlig455_032259

Neo: -

Age: logFC(26M/2M)=-0.803

Region-enriched R8: 3.879/0.00599

2.472 0.785 - - 0.709 - 0.978 Mlig455_032259 {REF} {Length: 3578} {Smed: dd_Smed_v6_13669_0_1, dd_Smed_v6_13669_0_1, [Score=51.2, Expect=1e-06]} {RNA1509_17409} {RNA1310_1983, RNA1509_17409} {RNA1509_17409, RNA815_12198}
11. MligTC455_18393 116 2.42 Mlig455_032819

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.599

Region-enriched R7: 3.928/0.00021

2.427 - - 0.712 0.954 - 0.761 Mlig455_032819 {REF} {Length: 1716} {NoTransDecoderORF} {RNA1509_55981} {RNA1310_19958.1, RNA1509_55981} {RNA1509_55981, RNA815_9304}
12. MligTC455_49453 164 3.42 Mlig455_021797

Neo: -

Age: Down-Up-Up

Regeneration-depleted R3: -3.706
Regeneration-depleted R4: -3.524

COL12A1 1.882 0.915 - - - - 0.967 Mlig455_021797 {REF} {Length: 2784} {Pfam: von Willebrand factor type A domain [PF00092.30, score=121.0]; von Willebrand factor type A domain [PF13519.8, score=59.4]; von Willebrand factor type A domain [PF13768.8, score=32.5]} {Human: ENSG00000111799, COL12A1, collagen type XII alpha 1 chain, [RH, Score=89.7, Expect=7e-18]} {Mouse: ENSMUSG00000022324, Matn2, matrilin 2, [RH, Score=88.2, Expect=7e-19]} {Celegans: WBGene00000853, cut-6, CUTiclin, [RH, Score=76.3, Expect=2e-14]} {Smed: dd_Smed_v6_7616_0_1, dd_Smed_v6_7616_0_1, [Score=67.8, Expect=5e-12]} {RNA1509_16895} {RNA1310_9807.1, RNA1509_16895} {RNA1509_16895, RNA815_3739}
13. MligTC455_32308 616 12.84 Mlig455_050858

Neo: -

Age: Up-Down-Down

Region-enriched R8: 2.186/0.00970

1.858 - - - 0.890 - 0.968 Mlig455_050858 {REF} {Length: 9789} {Pfam: Mucin-like glycoprotein [PF01456.19, score=24.1]} {RNA1509_37922} {RNA1310_501.1} {RNA815_49.1}
14. MligTC455_27717 2460 51.24 Mlig455_034360

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=0.825

ACTG1 1.841 - - - 0.874 - 0.967 Mlig455_034360 {REF} {Length: 1754} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_819} {RNA1310_20267.2} {RNA815_4929.3}
15. MligTC455_49026 215 4.48 Mlig455_037206

Neo: -

Age: Down-Up-Down

HSPG2 1.81 - - - 0.841 - 0.969 Mlig455_037206 {REF} {Length: 4399} {Pfam: Immunoglobulin domain [PF13927.8, score=184.9]; Immunoglobulin domain [PF13895.8, score=134.5]; Immunoglobulin I-set domain [PF07679.18, score=112.6]; Immunoglobulin domain [PF00047.27, score=95.1]; Immunoglobulin V-set domain [PF07686.19, score=61.1]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=42.0]; Fibronectin type III domain [PF00041.23, score=37.5]; Immunoglobulin domain [PF18452.3, score=35.0]; C17orf99 Ig domain [PF17736.3, score=23.3]} {Human: ENSG00000142798, HSPG2, heparan sulfate proteoglycan 2, [Score=117, Expect=8e-26]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=132, Expect=2e-30]} {Dmel: FBgn0000547, ed, echinoid, [Score=217, Expect=3e-57]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=138, Expect=6e-33]} {Smed: dd_Smed_v6_13903_0_1, dd_Smed_v6_13903_0_1, [Score=162, Expect=2e-40]} {RNA1509_31910} {RNA1310_43699} {RNA815_44505}
16. MligTC455_29918 133 2.76 Mlig455_052851, Mlig455_059290

Neo: -

Age: -

1.796 - - - 0.955 0.841 -

Mlig455_052851 {REF} {Length: 387} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=19.0]} {Celegans: WBGene00007723, C25F9.2, [Score=58.2, Expect=9e-11]} {RNA1509_55030} {RNA1310_10503} {RNA815_694.1}

Mlig455_059290 {REF} {Length: 4556} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=100.6]} {Celegans: WBGene00007723, C25F9.2, [Score=197, Expect=3e-51]} {RNA1509_4648, RNA1509_48307} {RNA1310_3417, RNA1509_48307} {RNA1509_48307, RNA815_694.2}
17. MligTC455_11873 182 3.8 Mlig455_064533

Neo: -

Age: -

Region-enriched R7: 6.862/0.00000
Region-enriched R8: 5.801/0.00001
Region-enriched R6: 4.321/0.00002

TBX20 1.706 - - 0.752 - - 0.954 Mlig455_064533 {REF} {Length: 2157} {Pfam: T-box [PF00907.24, score=229.4]} {Human: ENSG00000164532, TBX20, T-box 20, [Score=259, Expect=6e-82]} {Mouse: ENSMUSG00000031965, Tbx20, T-box 20, [Score=259, Expect=3e-84]} {Dmel: FBgn0261963, mid, midline, [Score=254, Expect=1e-78]} {Celegans: WBGene00003106, mab-9, T-box protein 12, [Score=228, Expect=2e-71]} {Smed: dd_Smed_v6_19890_0_1, dd_Smed_v6_19890_0_1, [Score=259, Expect=6e-81]} {RNA1509_38966} {RNA1310_30620} {RNA815_7293.1}
18. MligTC455_40282 205 4.27 Mlig455_049955

Neo: -

Age: Down-Up-Down

SLC22A5 0.977 - - - - - 0.977 Mlig455_049955 {REF} {Length: 2196} {Pfam: Sugar (and other) transporter [PF00083.26, score=75.6]; Major Facilitator Superfamily [PF07690.18, score=56.2]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=164, Expect=2e-43]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=157, Expect=4e-41]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=171, Expect=5e-46]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=168, Expect=4e-45]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=150, Expect=8e-39]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=155, Expect=4e-41]} {RNA1509_15842} {RNA1310_13367.1} {RNA815_6488}
19. MligTC455_18659 114 2.39 Mlig455_021331

Neo: -

Age: -

0.97 - - - - - 0.970 Mlig455_021331 {REF} {Length: 1597} {Pfam: Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2 [PF03318.15, score=31.6]} {Celegans: WBGene00016289, lntl-1, LIN-24 (Twenty-four) Like, [RH, Score=147, Expect=4e-42]} {RNA1509_6800} {RNA1310_20535, RNA1509_6800} {RNA1509_6800, RNA815_6611.1}
20. MligTC455_29083 71 1.48 Mlig455_049884

Neo: -

Age: Down-Up-Down

Region-enriched R7: 3.828/0.02244

MGAT1 0.964 - - - - - 0.964 Mlig455_049884 {REF} {Length: 2107} {Pfam: GNT-I family [PF03071.17, score=180.6]} {Human: ENSG00000131446, MGAT1, mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase, [Score=130, Expect=5e-34]} {Mouse: ENSMUSG00000020346, Mgat1, mannoside acetylglucosaminyltransferase 1, [Score=144, Expect=2e-39]} {Dmel: FBgn0034521, Mgat1, Mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase 1, [Score=140, Expect=3e-38]} {Celegans: WBGene00001638, gly-13, Putative alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, [Score=140, Expect=3e-38]} {Smed: dd_Smed_v6_12622_0_1, dd_Smed_v6_12622_0_1, [Score=145, Expect=3e-40]} {RNA1509_17370} {RNA1310_21430} {RNA815_2982}
21. MligTC455_20638 60 1.25 Mlig455_045078

Neo: -

Age: logFC(26M/2M)=1.945

0.958 - - - - - 0.958 Mlig455_045078 {REF} {Length: 1123} {RNA1509_33941} {RNA1310_128725} {RNA815_61135}
22. MligTC455_14078 281 5.86 Mlig455_003128

Neo: -

Age: -

Region-enriched R4: 3.621/0.00006

MAGT1 0.957 - - - 0.957 - - Mlig455_003128 {REF} {Length: 1271} {Pfam: OST3 / OST6 family, transporter family [PF04756.15, score=329.3]} {Human: ENSG00000102158, MAGT1, magnesium transporter 1, [RH, Score=370, Expect=7e-128]; ENSG00000104723, TUSC3, tumor suppressor candidate 3, [RH, Score=362, Expect=7e-125]} {Mouse: ENSMUSG00000039530, Tusc3, tumor suppressor candidate 3, [RH, Score=364, Expect=1e-125]; ENSMUSG00000031232, Magt1, magnesium transporter 1, [RH, Score=363, Expect=2e-125]} {Dmel: FBgn0032015, Ostgamma, Oligosaccharide transferase gamma subunit, [RH, Score=356, Expect=6e-123]} {Celegans: WBGene00022793, ZK686.3, Probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3, [RH, Score=291, Expect=2e-97]} {Smed: dd_Smed_v6_2352_0_1, dd_Smed_v6_2352_0_1, [RH, Score=410, Expect=2e-144]} {RNA1509_30051, RNA1509_3996} {RNA1310_25256.1, RNA1509_30051} {RNA1509_30051, RNA815_12577}
23. MligTC455_37806 115 2.4 Mlig455_023306

Neo: -

Age: -

0.957 - - - - - 0.957 Mlig455_023306 {REF} {Length: 583} {NoTransDecoderORF} {RNA1310_76214.1} {RNA815_33476.1}
24. MligTC455_37799 88 1.83 Mlig455_023237

Neo: -

Age: Down-Up-Down

Region-enriched R7: 3.658/0.03909

TRPM3 0.956 - - - - - 0.956 Mlig455_023237 {REF} {Length: 4849} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=92.7]; Ankyrin repeats (many copies) [PF13637.8, score=75.7]; Ankyrin repeat [PF13606.8, score=50.9]; Ankyrin repeats (many copies) [PF13857.8, score=46.5]; Ankyrin repeat [PF00023.32, score=35.1]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=56.2, Expect=4e-07]; ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=56.2, Expect=1e-07]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=55.1, Expect=7e-07]} {Celegans: WBGene00013835, mlt-4, Molting protein MLT-4, [Score=59.3, Expect=1e-08]} {Smed: dd_Smed_v6_10717_0_1, dd_Smed_v6_10717_0_1, [Score=69.7, Expect=7e-12]} {RNA1509_20239} {RNA1310_2354, RNA1509_20239} {RNA1509_20239, RNA815_15197}
25. MligTC455_33477 151 3.14 Mlig455_009439, Mlig455_026618

Neo: -

Age: Down-Up-Down

ZC3H7A 0.955 - - - - - 0.955

Mlig455_009439 {REF} {Length: 6380} {Human: ENSG00000122299, ZC3H7A, zinc finger CCCH-type containing 7A, [RH, Score=51.2, Expect=1e-05]} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1}

Mlig455_026618 {REF} {Length: 1033} {RNA1509_42818} {RNA1310_58068} {RNA815_43771}
26. MligTC455_38412 204 4.25 Mlig455_024382

Neo: -

Age: -

0.953 - - - - - 0.953 Mlig455_024382 {REF} {Length: 1491} {RNA1509_35191} {RNA1310_126.1} {RNA815_35412}
27. MligTC455_42998 572 11.92 Mlig455_034400

Neo: -

Age: -

Region-enriched R5: 2.221/0.01821

Regeneration-upregulated BL: 5.235

Regeneration-enriched BL: 5.235

0.952 - - - 0.952 - - Mlig455_034400 {REF} {Length: 1153} {NoTransDecoderORF} {RNA1509_12731} {RNA1310_34600} {RNA815_16012}
28. MligTC455_49361 59 1.23 Mlig455_052806

Neo: -

Age: -

0.95 - - - - - 0.950 Mlig455_052806 {REF} {Length: 2973} {Pfam: F5/8 type C domain [PF00754.27, score=25.2]} {Smed: dd_Smed_v6_36585_0_1, dd_Smed_v6_36585_0_1, [Score=46.2, Expect=5e-06]} {RNA1310_23370} {RNA815_18000}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA