TomoSeq data search

Data search

Results for MligTC455_33477

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33477

151

3.14

Mlig455_009439, Mlig455_026618

Neo: -

Age: Down-Up-Down

ZC3H7A

Mlig455_009439 {REF} {Length: 6380} {Human: ENSG00000122299, ZC3H7A, zinc finger CCCH-type containing 7A, [RH, Score=51.2, Expect=1e-05]} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1}

Mlig455_026618 {REF} {Length: 1033} {RNA1509_42818} {RNA1310_58068} {RNA815_43771}

Cumulative graph for MligTC455_33477

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	2.474	2.074	0.14739	0.76109
RegionR2	1.234	2.074	0.09143	0.37101
RegionR3	-5.147	2.074	0.00019	0.00769
RegionR4	0.602	2.074	0.28619	0.59563
RegionR5	-1.408	2.074	0.98321	1.00000
RegionR6	-1.694	2.074	0.99214	1.00000
RegionR7	1.996	2.074	0.01788	0.24586
RegionR8	1.943	2.074	0.07920	0.53616

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.844	2.074	0.16483	0.90756
RegenerationR2	-0.147	2.074	0.81911	0.99487
RegenerationR3	3.719	2.074	0.01657	0.23546
RegenerationR4	-1.277	2.074	0.15422	0.58451
RegenerationR5	0.607	2.074	0.51361	0.86637
RegenerationR6	1.457	2.074	0.18846	0.52594
RegenerationBL	0.72	2.074	0.44409	0.81133
RegenerationTP	0.659	2.074	0.47437	0.88374

Genes with expression patterns similar to MligTC455_33477

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33477	151	3.14	Mlig455_009439, Mlig455_026618	Neo: - Age: Down-Up-Down	ZC3H7A	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_009439 {REF} {Length: 6380} {Human: ENSG00000122299, ZC3H7A, zinc finger CCCH-type containing 7A, [RH, Score=51.2, Expect=1e-05]} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1} Mlig455_026618 {REF} {Length: 1033} {RNA1509_42818} {RNA1310_58068} {RNA815_43771}
2.	MligTC455_18826	116	2.41	Mlig455_060796, Mlig455_060825	Neo: - Age: -		1.75	0.781	-	-	-	0.969	-	Mlig455_060796 {REF} {Length: 1815} {Pfam: Ectodermal ciliogenesis protein [PF15795.7, score=93.8]} {Dmel: FBgn0050263, stum, stumble, [RH, Score=75.5, Expect=9e-15]} {Celegans: WBGene00022392, Y97E10AL.1, [RH, Score=104, Expect=8e-27]} {Smed: dd_Smed_v6_12811_0_1, dd_Smed_v6_12811_0_1, [Score=114, Expect=2e-30]} {RNA1310_22955} {RNA815_13118} Mlig455_060825 {REF} {Length: 2483} {Pfam: Ectodermal ciliogenesis protein [PF15795.7, score=92.9]} {Dmel: FBgn0050263, stum, stumble, [RH, Score=81.3, Expect=5e-16]} {Celegans: WBGene00022392, Y97E10AL.1, [RH, Score=104, Expect=8e-26]} {Smed: dd_Smed_v6_12811_0_1, dd_Smed_v6_12811_0_1, [RH, Score=115, Expect=3e-30]} {RNA1310_22955} {RNA815_13118}
3.	MligTC455_23517	847	17.64	Mlig455_027857	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.877 Region-enriched R8: 5.900/0.00000 Region-enriched R7: 4.915/0.00000	TLL1	1.73	-	-	-	0.780	-	0.950	Mlig455_027857 {REF} {Length: 1443} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=138.1]} {Human: ENSG00000038295, TLL1, tolloid like 1, [Score=95.9, Expect=7e-22]} {Mouse: ENSMUSG00000053626, Tll1, tolloid-like, [Score=94.7, Expect=4e-21]} {Dmel: FBgn0037395, CG10280, [Score=102, Expect=1e-24]} {Celegans: WBGene00003534, nas-15, Zinc metalloproteinase nas-15, [Score=119, Expect=6e-30]} {Smed: dd_Smed_v6_345_0_1, dd_Smed_v6_345_0_1, [RH, Score=124, Expect=7e-34]} {RNA1509_35571} {RNA1310_3360.1} {RNA815_11450}
4.	MligTC455_10064	68	1.41	Mlig455_029458, Mlig455_029482	Neo: - Age: -		1.719	-	-	-	-	0.980	0.739	Mlig455_029458 {REF} {Length: 1576} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=28.7]} {RNA1310_20120.1} {RNA815_50604} Mlig455_029482 {REF} {Length: 3696} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=29.0]} {RNA1310_20120.1} {RNA815_30795}
5.	MligTC455_25655	81	1.69	Mlig455_069078	Neo: - Age: -		1.71	-	-	-	-	0.956	0.754	Mlig455_069078 {REF} {Length: 205} {NoTransDecoderORF} {RNA1310_7131} {RNA815_8935}
6.	MligTC455_49640	1122	23.38	Mlig455_063691	Neo: - Age: logFC(26M/2M)=-0.370 Region-enriched R7: 2.861/0.00000 Region-enriched R6: 1.635/0.02487 Regeneration-downregulated BL: -2.323 Regeneration-depleted BL: -2.323		1.678	-	-	-	-	0.728	0.950	Mlig455_063691 {REF} {Length: 922} {RNA1509_5516} {RNA1310_77638} {RNA815_34597}
7.	MligTC455_40282	205	4.27	Mlig455_049955	Neo: - Age: Down-Up-Down	SLC22A5	0.978	-	-	-	-	-	0.978	Mlig455_049955 {REF} {Length: 2196} {Pfam: Sugar (and other) transporter [PF00083.26, score=75.6]; Major Facilitator Superfamily [PF07690.18, score=56.2]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=164, Expect=2e-43]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [Score=157, Expect=4e-41]} {Mouse: ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=171, Expect=5e-46]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=168, Expect=4e-45]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=150, Expect=8e-39]} {Smed: dd_Smed_v6_10903_0_1, dd_Smed_v6_10903_0_1, [Score=155, Expect=4e-41]} {RNA1509_15842} {RNA1310_13367.1} {RNA815_6488}
8.	MligTC455_28164	136	2.83	Mlig455_045835	Neo: - Age: -	LRRC9	0.972	-	-	-	-	0.972	-	Mlig455_045835 {REF} {Length: 10638} {Pfam: Leucine-rich repeat [PF14580.8, score=159.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=149.0]; Leucine rich repeat [PF13855.8, score=111.3]} {Human: ENSG00000131951, LRRC9, leucine rich repeat containing 9, [RH, Score=436, Expect=2e-129]} {Mouse: ENSMUSG00000021090, Lrrc9, leucine rich repeat containing 9, [RH, Score=639, Expect=0.0]} {Dmel: FBgn0039728, CG7896, [Score=74.7, Expect=6e-13]} {Celegans: WBGene00020266, T05H4.3, [RH, Score=80.1, Expect=8e-15]} {Smed: dd_Smed_v6_14851_0_1, dd_Smed_v6_14851_0_1, [RH, Score=369, Expect=2e-108]} {RNA1509_22179, RNA1509_44615} {RNA1310_1731, RNA1509_44615} {RNA1509_44615, RNA815_589.1}
9.	MligTC455_11873	182	3.8	Mlig455_064533	Neo: - Age: - Region-enriched R7: 6.862/0.00000 Region-enriched R8: 5.801/0.00001 Region-enriched R6: 4.321/0.00002	TBX20	0.97	-	-	-	-	-	0.970	Mlig455_064533 {REF} {Length: 2157} {Pfam: T-box [PF00907.24, score=229.4]} {Human: ENSG00000164532, TBX20, T-box 20, [Score=259, Expect=6e-82]} {Mouse: ENSMUSG00000031965, Tbx20, T-box 20, [Score=259, Expect=3e-84]} {Dmel: FBgn0261963, mid, midline, [Score=254, Expect=1e-78]} {Celegans: WBGene00003106, mab-9, T-box protein 12, [Score=228, Expect=2e-71]} {Smed: dd_Smed_v6_19890_0_1, dd_Smed_v6_19890_0_1, [Score=259, Expect=6e-81]} {RNA1509_38966} {RNA1310_30620} {RNA815_7293.1}
10.	MligTC455_24487	545	11.36	Mlig455_034600	Neo: - Age: Down-Up-Up Region-enriched R6: 4.264/0.00000 Region-enriched R7: 3.895/0.00000 Regeneration-downregulated R6: -3.270 Regeneration-depleted R6: -3.270		0.968	-	-	-	-	-	0.968	Mlig455_034600 {REF} {Length: 1082} {Pfam: Amnionless [PF14828.8, score=19.1]} {RNA1509_46788} {RNA1310_37428.1} {RNA815_17791}
11.	MligTC455_52171	137	2.86	Mlig455_032259	Neo: - Age: logFC(26M/2M)=-0.803 Region-enriched R8: 3.879/0.00599		0.966	-	-	-	-	-	0.966	Mlig455_032259 {REF} {Length: 3578} {Smed: dd_Smed_v6_13669_0_1, dd_Smed_v6_13669_0_1, [Score=51.2, Expect=1e-06]} {RNA1509_17409} {RNA1310_1983, RNA1509_17409} {RNA1509_17409, RNA815_12198}
12.	MligTC455_27718	2898	60.36	Mlig455_017369, Mlig455_017453, Mlig455_030941, Mlig455_038743	Neo: - Age: Up-Up-Up, logFC(26M/2M)=2.308	ACTG1	0.96	-	-	-	-	-	0.960	Mlig455_017369 {REF} {Length: 1755} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_819} {RNA1310_20267.2} {RNA815_4929.3} Mlig455_017453 {REF} {Length: 1755} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_819} {RNA1310_20267.2, RNA1509_819} {RNA1509_819, RNA815_4929.3} Mlig455_030941 {REF} {Length: 1755} {Pfam: Actin [PF00022.21, score=499.7]} {Human: ENSG00000184009, ACTG1, actin gamma 1, [RH, Score=769, Expect=0.0]; ENSG00000075624, ACTB, actin beta, [RH, Score=769, Expect=0.0]; ENSG00000159251, ACTC1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSG00000163017, ACTG2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSG00000107796, ACTA2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSG00000143632, ACTA1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSG00000169067, ACTBL2, actin, beta like 2, [RH, Score=733, Expect=0.0]} {Mouse: ENSMUSG00000029580, Actb, actin, beta, [RH, Score=769, Expect=0.0]; ENSMUSG00000062825, Actg1, actin, gamma, cytoplasmic 1, [RH, Score=769, Expect=0.0]; ENSMUSG00000068614, Actc1, actin, alpha, cardiac muscle 1, [RH, Score=746, Expect=0.0]; ENSMUSG00000059430, Actg2, actin, gamma 2, smooth muscle, enteric, [RH, Score=745, Expect=0.0]; ENSMUSG00000035783, Acta2, actin, alpha 2, smooth muscle, aorta, [RH, Score=744, Expect=0.0]; ENSMUSG00000031972, Acta1, actin, alpha 1, skeletal muscle, [RH, Score=741, Expect=0.0]; ENSMUSG00000055194, Actbl2, actin, beta-like 2, [RH, Score=739, Expect=0.0]} {Dmel: FBgn0000042, Act5C, Actin 5C, [RH, Score=770, Expect=0.0]} {Celegans: WBGene00000066, act-4, Actin-4, [RH, Score=769, Expect=0.0]} {Smed: dd_Smed_v6_3_0_1, dd_Smed_v6_3_0_1, [RH, Score=759, Expect=0.0]} {RNA1509_19403, RNA1509_33717, RNA1509_819} {RNA1310_20267.2, RNA1509_19403, RNA1509_33717} {RNA1509_19403, RNA1509_33717, RNA815_4929.3} Mlig455_038743 {REF} {Length: 235} {RNA1310_23291.2} {RNA815_33940}
13.	MligTC455_20638	60	1.25	Mlig455_045078	Neo: - Age: logFC(26M/2M)=1.945		0.959	-	-	-	-	-	0.959	Mlig455_045078 {REF} {Length: 1123} {RNA1509_33941} {RNA1310_128725} {RNA815_61135}
14.	MligTC455_39858	79	1.66	Mlig455_038520	Neo: - Age: Down-Up-Up, logFC(26M/2M)=2.278	NECAB1	0.959	-	-	-	-	0.959	-	Mlig455_038520 {REF} {Length: 1812} {Pfam: EF-hand domain [PF13405.8, score=35.3]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.7]; EF-hand domain pair [PF13833.8, score=27.4]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=26.7]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=187, Expect=2e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=181, Expect=2e-53]} {RNA1310_5770} {RNA815_27367}
15.	MligTC455_16388	257	5.35	Mlig455_058972	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.463 Region-enriched R7: 2.896/0.00002		0.956	-	-	-	-	-	0.956	Mlig455_058972 {REF} {Length: 1844} {RNA1509_38621} {RNA1310_17933.1, RNA1509_38621} {RNA1509_38621, RNA815_25414.1}
16.	MligTC455_24494	770	16.03	Mlig455_038083	Neo: - Age: - Region-enriched R8: 2.315/0.00008 Region-enriched R7: 1.860/0.00049 Region-enriched R6: 1.497/0.00343		0.955	-	-	-	-	-	0.955	Mlig455_038083 {REF} {Length: 1727} {RNA1509_9617} {RNA1310_27283} {RNA815_11447.1}
17.	MligTC455_22445	581	12.1	Mlig455_000365, Mlig455_046128, Mlig455_051768, Mlig455_056483	Neo: - Age: -		0.954	-	-	-	-	-	0.954	Mlig455_000365 {REF} {Length: 7344} {RNA1509_26358} {RNA1310_19270} {RNA815_9662} Mlig455_046128 {REF} {Length: 3741} {NoTransDecoderORF} {RNA1509_51930} {RNA1310_30917} {RNA815_9662} Mlig455_051768 {REF} {Length: 1926} {NoTransDecoderORF} {RNA1509_51930} {RNA1310_30917} {RNA815_9662} Mlig455_056483 {REF} {Length: 2175} {RNA1310_39289} {RNA815_16790}
18.	MligTC455_48028	185	3.85	Mlig455_007274	Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 4.108 Regeneration-enriched BL: 4.108	SPSB4	0.954	-	-	0.954	-	-	-	Mlig455_007274 {REF} {Length: 2130} {Human: ENSG00000175093, SPSB4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=104, Expect=7e-27]; ENSG00000171621, SPSB1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=103, Expect=4e-27]} {Mouse: ENSMUSG00000039911, Spsb1, splA/ryanodine receptor domain and SOCS box containing 1, [Score=103, Expect=2e-27]; ENSMUSG00000046997, Spsb4, splA/ryanodine receptor domain and SOCS box containing 4, [Score=103, Expect=1e-26]} {Dmel: FBgn0026238, gus, gustavus, [Score=107, Expect=5e-28]} {Celegans: WBGene00021597, spsb-1, SPSB (SPry and Socs Box) family, [Score=94.7, Expect=5e-23]} {Smed: dd_Smed_v6_9905_0_1, dd_Smed_v6_9905_0_1, [Score=77.0, Expect=8e-17]} {RNA1509_16638} {RNA1310_11847} {RNA815_5105}

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