TomoSeq data search

Data search

Results for MligTC455_24563

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24563

139

2.90

Mlig455_021781

Neo: -

Age: -

PEF1

Mlig455_021781 {REF} {Length: 2968} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=78.4]; EF hand [PF00036.34, score=75.9]; EF-hand domain pair [PF13499.8, score=70.5]; EF hand [PF13202.8, score=54.8]; EF-hand domain pair [PF13833.8, score=26.0]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=75.1, Expect=2e-14]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=77.8, Expect=1e-15]} {Dmel: FBgn0033529, CG17765, [Score=87.8, Expect=9e-20]} {Smed: dd_Smed_v6_6190_0_1, dd_Smed_v6_6190_0_1, [Score=72.4, Expect=6e-15]} {RNA1509_10434} {RNA1310_16355} {RNA815_18848}

Cumulative graph for MligTC455_24563

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.606	2.09	0.72564	1.00000
RegionR2	-0.501	2.09	0.55715	0.92058
RegionR3	-1.029	2.09	0.21818	0.75933
RegionR4	1.072	2.09	0.24024	0.53675
RegionR5	0.661	2.09	0.34272	0.69060
RegionR6	0.396	2.09	0.59756	1.00000
RegionR7	0.433	2.09	0.63307	1.00000
RegionR8	-1.637	2.09	0.26891	0.89189

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.717	2.09	0.15809	0.90135
RegenerationR2	0.474	2.09	0.46015	0.85256
RegenerationR3	1.694	2.09	0.04830	0.38244
RegenerationR4	0.763	2.09	0.36994	0.79389
RegenerationR5	-0.02	2.09	0.97013	1.00000
RegenerationR6	0.701	2.09	0.39752	0.73573
RegenerationBL	0.6	2.09	0.56508	0.91963
RegenerationTP	0.181	2.09	0.88623	1.00000

Genes with expression patterns similar to MligTC455_24563

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24563	139	2.9	Mlig455_021781	Neo: - Age: -	PEF1	5	-	1.000	1.000	1.000	1.000	1.000	Mlig455_021781 {REF} {Length: 2968} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=78.4]; EF hand [PF00036.34, score=75.9]; EF-hand domain pair [PF13499.8, score=70.5]; EF hand [PF13202.8, score=54.8]; EF-hand domain pair [PF13833.8, score=26.0]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=75.1, Expect=2e-14]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=77.8, Expect=1e-15]} {Dmel: FBgn0033529, CG17765, [Score=87.8, Expect=9e-20]} {Smed: dd_Smed_v6_6190_0_1, dd_Smed_v6_6190_0_1, [Score=72.4, Expect=6e-15]} {RNA1509_10434} {RNA1310_16355} {RNA815_18848}
2.	MligTC455_18857	62	1.28	Mlig455_061927	Neo: - Age: Up-Down-Up		1.732	-	-	-	-	0.962	0.770	Mlig455_061927 {REF} {Length: 6008} {RNA1509_41127} {RNA1310_30860} {RNA815_18104}
3.	MligTC455_15799	67	1.4	Mlig455_045387	Neo: - Age: Up-Down-Down	OXCT1	0.978	-	-	-	-	0.978	-	Mlig455_045387 {REF} {Length: 1560} {Pfam: Coenzyme A transferase [PF01144.25, score=151.9]} {Human: ENSG00000083720, OXCT1, 3-oxoacid CoA-transferase 1, [Score=305, Expect=8e-104]; ENSG00000198754, OXCT2, 3-oxoacid CoA-transferase 2, [Score=294, Expect=3e-97]} {Mouse: ENSMUSG00000022186, Oxct1, 3-oxoacid CoA transferase 1, [Score=300, Expect=6e-100]; ENSMUSG00000076438, Oxct2b, 3-oxoacid CoA transferase 2B, [Score=285, Expect=5e-94]; ENSMUSG00000076436, Oxct2a, 3-oxoacid CoA transferase 2A, [Score=285, Expect=5e-94]} {Dmel: FBgn0035298, SCOT, Succinyl-CoA:3-ketoacid CoA transferase, [Score=331, Expect=5e-113]} {Celegans: WBGene00007330, C05C10.3, Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial, [Score=271, Expect=8e-89]} {Smed: dd_Smed_v6_1189_0_3, dd_Smed_v6_1189_0_3, [RH, Score=303, Expect=6e-105]} {RNA1509_14646} {RNA1310_12340} {RNA815_6148.1}
4.	MligTC455_15690	117	2.43	Mlig455_068703	Neo: Irradiation Age: - Regeneration-enriched R6: 7.474 Regeneration-enriched BL: 6.776 Regeneration-enriched R3: 5.564 Regeneration-enriched R4: 5.451 Regeneration-enriched R5: 5.213		0.965	-	-	-	-	0.965	-	Mlig455_068703 {REF} {Length: 1557} {RNA1509_38578} {RNA1310_39831} {RNA815_50594}
5.	MligTC455_37423	11	0.23	Mlig455_026285	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_026285 {REF} {Length: 1171} {RNA1509_43962} {RNA1310_29023} {RNA815_17562}
6.	MligTC455_30768	67	1.41	Mlig455_015960	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_015960 {REF} {Length: 3001} {Pfam: Filament-like plant protein, long coiled-coil [PF05911.13, score=17.0]} {RNA1310_11503} {RNA815_13399}
7.	MligTC455_17382	684	14.24	Mlig455_002490, Mlig455_002676	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_002490 {REF} {Length: 3902} {TRANSSPLICED} {RNA1509_15079} {RNA1310_11437} {RNA815_14047} Mlig455_002676 {REF} {Length: 3894} {TRANSSPLICED} {RNA1509_15079, RNA1509_22825} {RNA1310_11437, RNA1509_15079, RNA1509_22825} {RNA1509_15079, RNA1509_22825, RNA815_14047}
8.	MligTC455_56116	21	0.43	Mlig455_008372	Neo: - Age: -		0.954	-	-	-	-	0.954	-	Mlig455_008372 {REF} {Length: 361} {NoTransDecoderORF}
9.	MligTC455_31543	26	0.54	Mlig455_014418, Mlig455_030887	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_014418 {REF} {Length: 4442} {Smed: dd_Smed_v6_15720_0_1, dd_Smed_v6_15720_0_1, [Score=114, Expect=2e-30]} {RNA1509_9634} {RNA1310_4693} {RNA815_3355.1} Mlig455_030887 {REF} {Length: 3708} {RNA1509_26962} {RNA1310_7663} {RNA815_3355.1}
10.	MligTC455_39867	78	1.62	Mlig455_037693	Neo: - Age: -	CSRP2	0.95	-	-	-	-	0.950	-	Mlig455_037693 {REF} {Length: 2259} {Pfam: LIM domain [PF00412.24, score=84.0]} {Human: ENSG00000175183, CSRP2, cysteine and glycine rich protein 2, [RH, Score=156, Expect=4e-48]; ENSG00000159176, CSRP1, cysteine and glycine rich protein 1, [RH, Score=155, Expect=5e-48]; ENSG00000129170, CSRP3, cysteine and glycine rich protein 3, [RH, Score=150, Expect=8e-46]} {Mouse: ENSMUSG00000026421, Csrp1, cysteine and glycine-rich protein 1, [RH, Score=154, Expect=9e-48]; ENSMUSG00000020186, Csrp2, cysteine and glycine-rich protein 2, [RH, Score=154, Expect=1e-47]; ENSMUSG00000030470, Csrp3, cysteine and glycine-rich protein 3, [RH, Score=149, Expect=1e-45]} {Dmel: FBgn0014863, Mlp84B, Muscle LIM protein at 84B, [Score=124, Expect=1e-33]} {Celegans: WBGene00003375, mlp-1, MLP/CRP family (Muscle LIM Protein/Cysteine-rich Protein), [Score=87.4, Expect=9e-23]} {Smed: dd_Smed_v6_373_0_1, dd_Smed_v6_373_0_1, [Score=103, Expect=5e-28]} {RNA1509_22484} {RNA1310_29364, RNA1509_22484} {RNA1509_22484, RNA815_18492.2}

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