TomoSeq data search

Data search

Results for MligTC455_30768

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30768

67

1.41

Mlig455_015960

Neo: -

Age: -

Mlig455_015960 {REF} {Length: 3001} {Pfam: Filament-like plant protein, long coiled-coil [PF05911.13, score=17.0]} {RNA1310_11503} {RNA815_13399}

Cumulative graph for MligTC455_30768

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.152	1.762	0.99975	1.00000
RegionR2	-0.506	1.762	0.86471	1.00000
RegionR3	3.081	1.762	0.01536	0.20068
RegionR4	2.022	1.762	0.07753	0.25925
RegionR5	2.906	1.762	0.01031	0.05902
RegionR6	3.324	1.762	0.00914	0.15893
RegionR7	-2.622	1.762	1.00000	1.00000
RegionR8	-3.053	1.762	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.233	1.762	0.99995	1.00000
RegenerationR2	2.284	1.762	0.06982	0.43016
RegenerationR3	0.921	1.762	0.23487	0.66902
RegenerationR4	-0.417	1.762	0.69442	0.95152
RegenerationR5	-0.691	1.762	0.35725	0.76914
RegenerationR6	0.921	1.762	0.21377	0.55740
RegenerationBL	-1.643	1.762	1.00000	1.00000
RegenerationTP	0.346	1.762	1.00000	1.00000

Genes with expression patterns similar to MligTC455_30768

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30768	67	1.41	Mlig455_015960	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_015960 {REF} {Length: 3001} {Pfam: Filament-like plant protein, long coiled-coil [PF05911.13, score=17.0]} {RNA1310_11503} {RNA815_13399}
2.	MligTC455_15799	67	1.4	Mlig455_045387	Neo: - Age: Up-Down-Down	OXCT1	1.829	0.873	-	-	-	0.956	-	Mlig455_045387 {REF} {Length: 1560} {Pfam: Coenzyme A transferase [PF01144.25, score=151.9]} {Human: ENSG00000083720, OXCT1, 3-oxoacid CoA-transferase 1, [Score=305, Expect=8e-104]; ENSG00000198754, OXCT2, 3-oxoacid CoA-transferase 2, [Score=294, Expect=3e-97]} {Mouse: ENSMUSG00000022186, Oxct1, 3-oxoacid CoA transferase 1, [Score=300, Expect=6e-100]; ENSMUSG00000076438, Oxct2b, 3-oxoacid CoA transferase 2B, [Score=285, Expect=5e-94]; ENSMUSG00000076436, Oxct2a, 3-oxoacid CoA transferase 2A, [Score=285, Expect=5e-94]} {Dmel: FBgn0035298, SCOT, Succinyl-CoA:3-ketoacid CoA transferase, [Score=331, Expect=5e-113]} {Celegans: WBGene00007330, C05C10.3, Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial, [Score=271, Expect=8e-89]} {Smed: dd_Smed_v6_1189_0_3, dd_Smed_v6_1189_0_3, [RH, Score=303, Expect=6e-105]} {RNA1509_14646} {RNA1310_12340} {RNA815_6148.1}
3.	MligTC455_20647	87	1.81	Mlig455_038202	Neo: - Age: -		1.787	0.818	-	-	-	0.969	-	Mlig455_038202 {REF} {Length: 2781} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=56.3]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=55.8, Expect=7e-08]} {Celegans: WBGene00015263, B0563.6, Probable G-protein coupled receptor B0563.6, [Score=48.5, Expect=9e-06]} {Smed: dd_Smed_v6_29112_0_1, dd_Smed_v6_29112_0_1, [Score=49.3, Expect=4e-06]} {RNA1509_59823} {RNA1310_7229} {RNA815_16116}
4.	MligTC455_29312	242	5.04	Mlig455_024665	Neo: - Age: - Region-enriched R3: 2.630/0.00156 Region-enriched R5: 1.791/0.03664	SLC22A6	1.73	-	-	-	0.952	0.778	-	Mlig455_024665 {REF} {Length: 4159} {Pfam: Sugar (and other) transporter [PF00083.26, score=112.3]; Major Facilitator Superfamily [PF07690.18, score=83.6]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=184, Expect=1e-50]} {Mouse: ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=174, Expect=4e-47]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=172, Expect=3e-46]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=170, Expect=2e-45]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=176, Expect=8e-48]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=139, Expect=6e-35]} {Smed: dd_Smed_v6_1159_0_1, dd_Smed_v6_1159_0_1, [Score=132, Expect=7e-33]} {RNA1509_13135, RNA1509_47373, RNA1509_50772} {RNA1310_6359.1, RNA1509_13135, RNA1509_47373, RNA1509_50772} {RNA1509_13135, RNA1509_47373, RNA1509_50772, RNA815_24636}
5.	MligTC455_25949	221	4.59	Mlig455_001818, Mlig455_025869, Mlig455_025960, Mlig455_056965, Mlig455_058910	Neo: Int S/G2/M Age: -		1.676	0.955	-	-	-	-	0.721	Mlig455_001818 {REF} {Length: 189} {NoTransDecoderORF} {RNA1310_44928} {RNA815_23085.2} Mlig455_025869 {REF} {Length: 790} {RNA1310_68154} {RNA815_23085.1} Mlig455_025960 {REF} {Length: 860} {RNA1310_68154} {RNA815_23085.1} Mlig455_056965 {REF} {Length: 553} {NoTransDecoderORF} {RNA1509_18737} {RNA1310_24175.1} {RNA815_21371.1} Mlig455_058910 {REF} {Length: 429} {TRANSSPLICED} {RNA1310_44928} {RNA815_23085.2}
6.	MligTC455_54109	90	1.86	Mlig455_035214	Neo: - Age: -		0.976	-	-	-	0.976	-	-	Mlig455_035214 {REF} {Length: 4537} {TRANSSPLICED} {RNA1509_36649} {RNA1310_5371, RNA1509_36649} {RNA1509_36649, RNA815_31423}
7.	MligTC455_13258	51	1.07	Mlig455_006014, Mlig455_066582	Neo: Int S/G2/M Age: -		0.973	0.973	-	-	-	-	-	Mlig455_006014 {REF} {Length: 1250} {TRANSSPLICED} {Pfam: F5/8 type C domain [PF00754.27, score=36.0]} {Smed: dd_Smed_v6_71482_0_1, dd_Smed_v6_71482_0_1, [RH, Score=67.0, Expect=2e-13]} {RNA1310_41523} {RNA815_38667} Mlig455_066582 {REF} {Length: 921} {TRANSSPLICED} {Pfam: F5/8 type C domain [PF00754.27, score=38.1]} {Dmel: FBgn0030617, CG9095, [Score=44.3, Expect=7e-06]} {Smed: dd_Smed_v6_71482_0_1, dd_Smed_v6_71482_0_1, [Score=62.8, Expect=4e-13]} {RNA1310_41523} {RNA815_38667}
8.	MligTC455_15690	117	2.43	Mlig455_068703	Neo: Irradiation Age: - Regeneration-enriched R6: 7.474 Regeneration-enriched BL: 6.776 Regeneration-enriched R3: 5.564 Regeneration-enriched R4: 5.451 Regeneration-enriched R5: 5.213		0.967	-	-	-	-	0.967	-	Mlig455_068703 {REF} {Length: 1557} {RNA1509_38578} {RNA1310_39831} {RNA815_50594}
9.	MligTC455_29382	141	2.94	Mlig455_032367, Mlig455_068516	Neo: - Age: Up-Down-Down		0.964	-	-	-	0.964	-	-	Mlig455_032367 {REF} {Length: 11082} {RNA1509_34218, RNA1509_44206} {RNA1310_18727, RNA1509_34218} {RNA1509_34218, RNA815_16176.1} Mlig455_068516 {REF} {Length: 2460} {RNA1509_38155} {RNA1310_16376} {RNA815_12881}
10.	MligTC455_41425	227	4.73	Mlig455_000200	Neo: - Age: logFC(26M/2M)=3.901 Region-enriched R4: 5.901/0.01836	TRHR	0.96	-	-	0.960	-	-	-	Mlig455_000200 {REF} {Length: 4194} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=56.3]} {Human: ENSG00000174417, TRHR, thyrotropin releasing hormone receptor, [Score=56.2, Expect=6e-08]} {Mouse: ENSMUSG00000039079, Trhr2, thyrotropin releasing hormone receptor 2, [Score=64.7, Expect=6e-11]} {Smed: dd_Smed_v6_18754_0_1, dd_Smed_v6_18754_0_1, [Score=129, Expect=3e-33]} {RNA1509_14169} {RNA1310_23284.2} {RNA815_6643.1}
11.	MligTC455_24563	139	2.9	Mlig455_021781	Neo: - Age: -	PEF1	0.958	-	-	-	-	0.958	-	Mlig455_021781 {REF} {Length: 2968} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=78.4]; EF hand [PF00036.34, score=75.9]; EF-hand domain pair [PF13499.8, score=70.5]; EF hand [PF13202.8, score=54.8]; EF-hand domain pair [PF13833.8, score=26.0]} {Human: ENSG00000162517, PEF1, penta-EF-hand domain containing 1, [Score=75.1, Expect=2e-14]} {Mouse: ENSMUSG00000028779, Pef1, penta-EF hand domain containing 1, [Score=77.8, Expect=1e-15]} {Dmel: FBgn0033529, CG17765, [Score=87.8, Expect=9e-20]} {Smed: dd_Smed_v6_6190_0_1, dd_Smed_v6_6190_0_1, [Score=72.4, Expect=6e-15]} {RNA1509_10434} {RNA1310_16355} {RNA815_18848}
12.	MligTC455_15689	115	2.4	Mlig455_032535	Neo: - Age: - Regeneration-enriched R6: 7.489 Regeneration-enriched BL: 6.877 Regeneration-enriched R4: 5.608 Regeneration-enriched R3: 5.570 Regeneration-enriched R5: 5.313		0.957	-	-	-	-	0.957	-	Mlig455_032535 {REF} {Length: 487} {NoTransDecoderORF} {RNA1509_23966} {RNA1310_63649} {RNA815_50594}
13.	MligTC455_38270	39	0.82	Mlig455_009946, Mlig455_053311	Neo: - Age: -	OSBPL1A, OSBPL2	0.957	-	-	-	-	0.957	-	Mlig455_009946 {REF} {Length: 1530} {TRANSSPLICED} {Pfam: Oxysterol-binding protein [PF01237.20, score=307.0]} {Human: ENSG00000130703, OSBPL2, oxysterol binding protein like 2, [RH, Score=276, Expect=2e-88]} {Mouse: ENSMUSG00000044252, Osbpl1a, oxysterol binding protein-like 1A, [RH, Score=278, Expect=8e-91]} {Dmel: FBgn0034951, CG3860, [Score=291, Expect=8e-94]} {Celegans: WBGene00012930, obr-1, Oxysterol-binding protein, [Score=184, Expect=2e-51]} {Smed: dd_Smed_v6_3179_0_1, dd_Smed_v6_3179_0_1, [Score=284, Expect=5e-91]} {RNA1509_52805} {RNA1310_26546} {RNA815_6693} Mlig455_053311 {REF} {Length: 3157} {TRANSSPLICED} {Pfam: Oxysterol-binding protein [PF01237.20, score=409.1]} {Human: ENSG00000141447, OSBPL1A, oxysterol binding protein like 1A, [RH, Score=366, Expect=2e-116]; ENSG00000130703, OSBPL2, oxysterol binding protein like 2, [RH, Score=353, Expect=8e-117]} {Mouse: ENSMUSG00000044252, Osbpl1a, oxysterol binding protein-like 1A, [RH, Score=375, Expect=8e-120]} {Dmel: FBgn0034951, CG3860, [Score=377, Expect=8e-127]} {Celegans: WBGene00012930, obr-1, Oxysterol-binding protein, [Score=189, Expect=5e-53]} {Smed: dd_Smed_v6_3179_0_1, dd_Smed_v6_3179_0_1, [Score=341, Expect=1e-112]} {RNA1509_52805} {RNA1310_16465.1, RNA1509_52805} {RNA1509_52805, RNA815_6693}
14.	MligTC455_04549	296	6.16	Mlig455_047043	Neo: - Age: logFC(26M/2M)=0.556 Region-enriched R3: 2.204/0.00044 Region-enriched R4: 1.879/0.02998 Region-enriched R5: 1.340/0.03066	TYMP	0.954	-	-	-	0.954	-	-	Mlig455_047043 {REF} {Length: 2149} {TRANSSPLICED} {Pfam: Glycosyl transferase family, a/b domain [PF00591.23, score=114.4]; Glycosyl transferase family, helical bundle domain [PF02885.19, score=55.5]; Pyrimidine nucleoside phosphorylase C-terminal domain [PF07831.15, score=27.3]} {Human: ENSG00000025708, TYMP, thymidine phosphorylase, [RH, Score=324, Expect=7e-106]} {Mouse: ENSMUSG00000022615, Tymp, thymidine phosphorylase, [RH, Score=320, Expect=1e-104]} {Smed: dd_Smed_v6_869_0_1, dd_Smed_v6_869_0_1, [RH, Score=323, Expect=2e-106]} {RNA1509_12879} {RNA1310_13641} {RNA815_1859}
15.	MligTC455_29857	48	1.01	Mlig455_063220	Neo: - Age: -		0.952	0.952	-	-	-	-	-	Mlig455_063220 {REF} {Length: 1136} {TRANSSPLICED} {RNA1509_20954} {RNA1310_33964.1} {RNA815_10226}
16.	MligTC455_30697	65	1.35	Mlig455_061109	Neo: - Age: logFC(26M/2M)=0.757		0.951	-	-	0.951	-	-	-	Mlig455_061109 {REF} {Length: 2730} {Pfam: Fibronectin type III domain [PF00041.23, score=104.5]} {RNA1509_47722} {RNA1310_18059, RNA1509_47722} {RNA1509_47722, RNA815_718.1}
17.	MligTC455_33943	112	2.32	Mlig455_024001	Neo: Germline Age: logFC(26M/2M)=-0.536		0.95	0.950	-	-	-	-	-	Mlig455_024001 {REF} {Length: 2684} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=62.6]} {Smed: dd_Smed_v6_33525_0_1, dd_Smed_v6_33525_0_1, [RH, Score=189, Expect=6e-57]} {RNA1509_43697} {RNA1310_20430.2} {RNA815_11135.1}

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