TomoSeq data search

Data search

Results for MligTC455_24595

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24595

95

1.98

Mlig455_007755, Mlig455_042852

Neo: -

Age: logFC(26M/2M)=0.563

Mlig455_007755 {REF} {Length: 2174} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48697} {RNA1310_71854, RNA1509_48697} {RNA1509_48697, RNA815_131.1}

Mlig455_042852 {REF} {Length: 82} {NoTransDecoderORF} {RNA1509_48697} {RNA1310_117468} {RNA815_40477}

Cumulative graph for MligTC455_24595

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.843	2.056	0.42122	1.00000
RegionR2	0.838	2.056	0.45544	0.84334
RegionR3	2.223	2.056	0.00398	0.08177
RegionR4	0.873	2.056	0.32960	0.64767
RegionR5	1.398	2.056	0.06552	0.22738
RegionR6	1.555	2.056	0.07781	0.51733
RegionR7	-1.842	2.056	0.35743	0.99395
RegionR8	-2.203	2.056	0.36511	0.99931

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.973	2.056	0.77307	1.00000
RegenerationR2	-0.602	2.056	0.41307	0.82269
RegenerationR3	-0.173	2.056	0.79309	0.98001
RegenerationR4	0.329	2.056	0.64483	0.93044
RegenerationR5	0.263	2.056	0.62859	0.92196
RegenerationR6	-0.237	2.056	0.74473	0.94951
RegenerationBL	1.217	2.056	0.40658	0.77594
RegenerationTP	-0.332	2.056	0.87187	1.00000

Genes with expression patterns similar to MligTC455_24595

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24595	95	1.98	Mlig455_007755, Mlig455_042852	Neo: - Age: logFC(26M/2M)=0.563		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007755 {REF} {Length: 2174} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48697} {RNA1310_71854, RNA1509_48697} {RNA1509_48697, RNA815_131.1} Mlig455_042852 {REF} {Length: 82} {NoTransDecoderORF} {RNA1509_48697} {RNA1310_117468} {RNA815_40477}
2.	MligTC455_48464	642	13.37	Mlig455_014363, Mlig455_034468	Neo: - Age: Down-Up-Down Region-enriched R3: 1.858/0.00148	WASHC1	2.81	-	-	0.960	0.949	-	0.901	Mlig455_014363 {REF} {Length: 2191} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=119.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [Score=123, Expect=6e-30]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [Score=125, Expect=8e-31]} {Dmel: FBgn0033692, wash, washout, [RH, Score=76.6, Expect=1e-14]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [Score=65.5, Expect=1e-11]} {RNA1509_20623} {RNA1310_37341} {RNA815_18278} Mlig455_034468 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=153.5]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [Score=147, Expect=2e-38]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [Score=151, Expect=8e-40]} {Dmel: FBgn0033692, wash, washout, [RH, Score=90.5, Expect=4e-19]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [Score=96.7, Expect=4e-22]} {RNA1509_20623, RNA1509_44526} {RNA1310_37341, RNA1509_20623, RNA1509_44526} {RNA1509_20623, RNA1509_44526, RNA815_18278}
3.	MligTC455_34634	385	8.01	Mlig455_024428	Neo: - Age: -	ATP2A1	1.803	-	-	-	0.963	-	0.840	Mlig455_024428 {REF} {Length: 3158} {Pfam: E1-E2 ATPase [PF00122.22, score=187.2]; Cation transporting ATPase, C-terminus [PF00689.23, score=155.5]; Cation transport ATPase (P-type) [PF13246.8, score=75.7]; Cation transporter/ATPase, N-terminus [PF00690.28, score=74.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=70.1]; haloacid dehalogenase-like hydrolase [PF12710.9, score=31.9]; haloacid dehalogenase-like hydrolase [PF08282.14, score=31.4]} {Human: ENSG00000196296, ATP2A1, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, [RH, Score=1417, Expect=0.0]; ENSG00000174437, ATP2A2, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, [RH, Score=1403, Expect=0.0]; ENSG00000074370, ATP2A3, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, [RH, Score=1355, Expect=0.0]} {Mouse: ENSMUSG00000030730, Atp2a1, ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, [RH, Score=1413, Expect=0.0]; ENSMUSG00000029467, Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, [RH, Score=1405, Expect=0.0]; ENSMUSG00000020788, Atp2a3, ATPase, Ca++ transporting, ubiquitous, [RH, Score=1367, Expect=0.0]} {Dmel: FBgn0263006, SERCA, Sarco/endoplasmic reticulum Ca(2+)-ATPase, [RH, Score=1469, Expect=0.0]} {Celegans: WBGene00004736, sca-1, Calcium-transporting ATPase, [RH, Score=1437, Expect=0.0]} {Smed: dd_Smed_v6_9529_0_1, dd_Smed_v6_9529_0_1, [RH, Score=1505, Expect=0.0]} {RNA1509_30303} {RNA1310_3909.1} {RNA815_955.1}
4.	MligTC455_13959	747	15.56	Mlig455_003610, Mlig455_041582	Neo: - Age: logFC(26M/2M)=0.281 Region-enriched R3: 1.201/0.04227	GK3P	1.764	-	-	-	0.801	-	0.963	Mlig455_003610 {REF} {Length: 2428} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=226.2]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=185.3]} {Human: ENSG00000229894, GK3P, glycerol kinase 3 pseudogene, [RH, Score=506, Expect=9e-175]; ENSG00000198814, GK, glycerol kinase, [RH, Score=504, Expect=3e-174]; ENSG00000196475, GK2, glycerol kinase 2, [RH, Score=489, Expect=4e-168]} {Mouse: ENSMUSG00000025059, Gk, glycerol kinase, [RH, Score=512, Expect=3e-177]; ENSMUSG00000053624, Gykl1, glycerol kinase-like 1, [RH, Score=493, Expect=7e-170]; ENSMUSG00000050553, Gk2, glycerol kinase 2, [RH, Score=490, Expect=8e-169]} {Dmel: FBgn0025592, Gk1, Glycerol kinase 1, [RH, Score=521, Expect=0.0]} {Celegans: WBGene00020007, R11F4.1, Probable glycerol kinase, [RH, Score=501, Expect=5e-174]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [RH, Score=463, Expect=2e-159]} {RNA1509_6526} {RNA1310_9218, RNA1509_6526} {RNA1509_6526, RNA815_5702} Mlig455_041582 {REF} {Length: 3595} {TRANSSPLICED} {Pfam: FGGY family of carbohydrate kinases, N-terminal domain [PF00370.23, score=226.0]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=186.1]} {Human: ENSG00000229894, GK3P, glycerol kinase 3 pseudogene, [RH, Score=504, Expect=6e-174]; ENSG00000198814, GK, glycerol kinase, [RH, Score=502, Expect=4e-173]; ENSG00000196475, GK2, glycerol kinase 2, [RH, Score=487, Expect=2e-167]} {Mouse: ENSMUSG00000025059, Gk, glycerol kinase, [RH, Score=510, Expect=2e-176]; ENSMUSG00000053624, Gykl1, glycerol kinase-like 1, [RH, Score=490, Expect=5e-169]; ENSMUSG00000050553, Gk2, glycerol kinase 2, [RH, Score=488, Expect=5e-168]} {Dmel: FBgn0025592, Gk1, Glycerol kinase 1, [RH, Score=519, Expect=2e-180]} {Celegans: WBGene00020007, R11F4.1, Probable glycerol kinase, [RH, Score=503, Expect=9e-175]} {Smed: dd_Smed_v6_3739_0_2, dd_Smed_v6_3739_0_2, [RH, Score=462, Expect=1e-158]} {RNA1509_6526} {RNA1310_9218} {RNA815_5702}
5.	MligTC455_43495	651	13.56	Mlig455_012102	Neo: - Age: - Region-enriched R4: 3.136/0.00082	AGMO	0.968	-	-	-	-	-	0.968	Mlig455_012102 {REF} {Length: 1720} {Pfam: Fatty acid hydroxylase superfamily [PF04116.15, score=94.8]} {Human: ENSG00000187546, AGMO, alkylglycerol monooxygenase, [Score=291, Expect=1e-94]} {Mouse: ENSMUSG00000050103, Agmo, alkylglycerol monooxygenase, [Score=286, Expect=7e-93]} {Celegans: WBGene00007210, agmo-1, Alkylglycerol monooxygenase, [Score=212, Expect=8e-64]} {Smed: dd_Smed_v6_3673_0_1, dd_Smed_v6_3673_0_1, [Score=273, Expect=2e-88]} {RNA1509_15122} {RNA1310_18131} {RNA815_6945}
6.	MligTC455_12881	431	8.97	Mlig455_069109	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.318	CYLD	0.967	-	-	-	0.967	-	-	Mlig455_069109 {REF} {Length: 5402} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=29.6]} {Human: ENSG00000083799, CYLD, CYLD lysine 63 deubiquitinase, [RH, Score=296, Expect=2e-86]} {Mouse: ENSMUSG00000036712, Cyld, CYLD lysine 63 deubiquitinase, [Score=287, Expect=3e-83]} {Dmel: FBgn0032210, CYLD, Cylindromatosis, [RH, Score=323, Expect=2e-99]} {Celegans: WBGene00009594, cyld-1, CYLinDromatosis (Human disease gene) homolog, [RH, Score=210, Expect=1e-56]} {Smed: dd_Smed_v6_3043_0_1, dd_Smed_v6_3043_0_1, [RH, Score=158, Expect=8e-40]} {RNA1509_18711, RNA1509_19340, RNA1509_34756, RNA1509_35847} {RNA1310_5613.1, RNA1509_19340, RNA1509_34756, RNA1509_35847} {RNA1509_19340, RNA1509_34756, RNA1509_35847, RNA815_1700}
7.	MligTC455_13972	42	0.87	Mlig455_058440	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_058440 {REF} {Length: 189} {NoTransDecoderORF}
8.	MligTC455_51107	671	13.97	Mlig455_003778, Mlig455_045880, Mlig455_065735, Mlig455_068615	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.260 Region-enriched R4: 4.005/0.00030	DUT	0.959	-	-	-	-	-	0.959	Mlig455_003778 {REF} {Length: 758} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=115.5]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=99.8, Expect=6e-26]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=97.1, Expect=4e-25]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=97.4, Expect=4e-25]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=100, Expect=2e-24]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=94.0, Expect=3e-24]} {RNA1509_34347} {RNA1310_47056} {RNA815_19475} Mlig455_045880 {REF} {Length: 763} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=115.2]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=103, Expect=8e-28]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=101, Expect=6e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=101, Expect=5e-27]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=3e-26]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=97.1, Expect=8e-26]} {RNA1509_34347} {RNA1310_47056} {RNA815_19475} Mlig455_065735 {REF} {Length: 763} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=115.2]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=103, Expect=8e-28]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=101, Expect=6e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=101, Expect=5e-27]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=3e-26]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=97.1, Expect=8e-26]} {RNA1509_34347} {RNA1310_47056} {RNA815_19475} Mlig455_068615 {REF} {Length: 864} {TRANSSPLICED} {Pfam: dUTPase [PF00692.21, score=115.2]} {Human: ENSG00000128951, DUT, deoxyuridine triphosphatase, [Score=103, Expect=8e-28]} {Mouse: ENSMUSG00000027203, Dut, deoxyuridine triphosphatase, [Score=101, Expect=6e-27]} {Dmel: FBgn0250837, dUTPase, Deoxyuridine triphosphatase, [Score=101, Expect=5e-27]} {Celegans: WBGene00010609, dut-1, DeoxyUTPase; Deoxyuridinetriphosphatase, [Score=104, Expect=3e-26]} {Smed: dd_Smed_v6_2921_0_1, dd_Smed_v6_2921_0_1, [Score=97.1, Expect=8e-26]} {RNA1509_34347} {RNA1310_47056, RNA1509_34347} {RNA1509_34347, RNA815_19475}
9.	MligTC455_49976	325	6.78	Mlig455_070272	Neo: - Age: Up-Down-Down Region-enriched R5: 1.635/0.03810	PTK7	0.957	-	-	-	-	-	0.957	Mlig455_070272 {REF} {Length: 7388} {Pfam: Immunoglobulin domain [PF13927.8, score=137.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=130.7]; Immunoglobulin I-set domain [PF07679.18, score=114.2]; Immunoglobulin V-set domain [PF07686.19, score=89.7]; Protein kinase domain [PF00069.27, score=85.3]; Immunoglobulin domain [PF13895.8, score=69.0]; Immunoglobulin domain [PF00047.27, score=60.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=19.6]} {Human: ENSG00000112655, PTK7, protein tyrosine kinase 7 (inactive), [Score=110, Expect=7e-24]; ENSG00000148053, NTRK2, neurotrophic receptor tyrosine kinase 2, [Score=107, Expect=5e-23]; ENSG00000007264, MATK, megakaryocyte-associated tyrosine kinase, [Score=105, Expect=8e-23]; ENSG00000140538, NTRK3, neurotrophic receptor tyrosine kinase 3, [Score=105, Expect=4e-22]} {Mouse: ENSMUSG00000055254, Ntrk2, neurotrophic tyrosine kinase, receptor, type 2, [Score=107, Expect=4e-23]; ENSMUSG00000028072, Ntrk1, neurotrophic tyrosine kinase, receptor, type 1, [Score=107, Expect=5e-23]; ENSMUSG00000023972, Ptk7, PTK7 protein tyrosine kinase 7, [Score=107, Expect=7e-23]; ENSMUSG00000059146, Ntrk3, neurotrophic tyrosine kinase, receptor, type 3, [Score=105, Expect=2e-22]; ENSMUSG00000038751, Ptk6, PTK6 protein tyrosine kinase 6, [Score=102, Expect=3e-22]; ENSMUSG00000053158, Fes, feline sarcoma oncogene, [Score=102, Expect=1e-21]} {Dmel: FBgn0010389, htl, heartless, [Score=95.1, Expect=2e-19]} {Celegans: WBGene00017381, svh-4, Discoidin domain-containing receptor tyrosine kinase B, [Score=117, Expect=2e-26]} {Smed: dd_Smed_v6_6999_0_1, dd_Smed_v6_6999_0_1, [Score=259, Expect=1e-70]} {RNA1509_38212} {RNA1310_1389} {RNA815_9748}
10.	MligTC455_37157	674	14.05	Mlig455_021950, Mlig455_029526	Neo: - Age: Up-Down-Up		0.955	-	-	-	-	-	0.955	Mlig455_021950 {REF} {Length: 2002} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=56.0]} {Dmel: FBgn0030443, CG12715, [Score=84.7, Expect=7e-18]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=53.9, Expect=6e-08]} {RNA1509_19885} {RNA1310_15859} {RNA815_6722} Mlig455_029526 {REF} {Length: 2306} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=87.1]} {Dmel: FBgn0030443, CG12715, [Score=99.4, Expect=4e-22]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=68.6, Expect=2e-12]} {RNA1509_44824} {RNA1310_15859} {RNA815_6722}
11.	MligTC455_53237	382	7.95	Mlig455_044136	Neo: Int S/G2/M Age: - Region-enriched R5: 1.005/0.04732		0.95	-	-	-	0.950	-	-	Mlig455_044136 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=91.7]; Dimerisation domain of Zinc Transporter [PF16916.7, score=40.6]} {Celegans: WBGene00019841, R02F11.3, [RH, Score=248, Expect=1e-76]} {Smed: dd_Smed_v6_12060_0_1, dd_Smed_v6_12060_0_1, [RH, Score=280, Expect=1e-89]} {RNA1509_14016} {RNA1310_8907, RNA1509_14016} {RNA1509_14016, RNA815_2986}

Berezikov Lab - 2020-2021 © ERIBA