Data search
Results for MligTC455_53237
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_53237 | 382 | 7.95 | Mlig455_044136 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.005/0.04732 |
Mlig455_044136 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=91.7]; Dimerisation domain of Zinc Transporter [PF16916.7, score=40.6]} {Celegans: WBGene00019841, R02F11.3, [RH, Score=248, Expect=1e-76]} {Smed: dd_Smed_v6_12060_0_1, dd_Smed_v6_12060_0_1, [RH, Score=280, Expect=1e-89]} {RNA1509_14016} {RNA1310_8907, RNA1509_14016} {RNA1509_14016, RNA815_2986} |
Cumulative graph for MligTC455_53237
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.586 | 3.432 | 0.14235 | 0.75214 | |
| RegionR2 | -0.352 | 3.432 | 0.55920 | 0.92193 | |
| RegionR3 | 0.736 | 3.432 | 0.07947 | 0.49921 | |
| RegionR4 | 1.023 | 3.432 | 0.05905 | 0.21577 | |
| RegionR5 | 1.005 | 3.432 | 0.00760 | 0.04732 | |
| RegionR6 | -0.523 | 3.432 | 0.29214 | 0.88371 | |
| RegionR7 | -2.134 | 3.432 | 0.00522 | 0.11364 | |
| RegionR8 | -1.341 | 3.432 | 0.10487 | 0.60421 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.736 | 3.432 | 0.10117 | 0.81835 | |
| RegenerationR2 | 0.319 | 3.432 | 0.55932 | 0.89830 | |
| RegenerationR3 | -0.044 | 3.432 | 0.93352 | 1.00000 | |
| RegenerationR4 | -0.126 | 3.432 | 0.81927 | 0.99355 | |
| RegenerationR5 | -0.003 | 3.432 | 0.99962 | 1.00000 | |
| RegenerationR6 | 0.983 | 3.432 | 0.10500 | 0.40155 | |
| RegenerationBL | -0.163 | 3.432 | 0.86792 | 1.00000 | |
| RegenerationTP | 0.935 | 3.432 | 0.30470 | 0.75004 |
Genes with expression patterns similar to MligTC455_53237
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_53237 | 382 | 7.95 | Mlig455_044136 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.005/0.04732 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044136 {REF} {Length: 2489} {TRANSSPLICED} {Pfam: Cation efflux family [PF01545.23, score=91.7]; Dimerisation domain of Zinc Transporter [PF16916.7, score=40.6]} {Celegans: WBGene00019841, R02F11.3, [RH, Score=248, Expect=1e-76]} {Smed: dd_Smed_v6_12060_0_1, dd_Smed_v6_12060_0_1, [RH, Score=280, Expect=1e-89]} {RNA1509_14016} {RNA1310_8907, RNA1509_14016} {RNA1509_14016, RNA815_2986} | |
| 2. | MligTC455_34634 | 385 | 8.01 | Mlig455_024428 | Neo: - Age: - |
ATP2A1 | 1.899 | - | - | - | 0.966 | 0.933 | - | Mlig455_024428 {REF} {Length: 3158} {Pfam: E1-E2 ATPase [PF00122.22, score=187.2]; Cation transporting ATPase, C-terminus [PF00689.23, score=155.5]; Cation transport ATPase (P-type) [PF13246.8, score=75.7]; Cation transporter/ATPase, N-terminus [PF00690.28, score=74.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=70.1]; haloacid dehalogenase-like hydrolase [PF12710.9, score=31.9]; haloacid dehalogenase-like hydrolase [PF08282.14, score=31.4]} {Human: ENSG00000196296, ATP2A1, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, [RH, Score=1417, Expect=0.0]; ENSG00000174437, ATP2A2, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, [RH, Score=1403, Expect=0.0]; ENSG00000074370, ATP2A3, ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, [RH, Score=1355, Expect=0.0]} {Mouse: ENSMUSG00000030730, Atp2a1, ATPase, Ca++ transporting, cardiac muscle, fast twitch 1, [RH, Score=1413, Expect=0.0]; ENSMUSG00000029467, Atp2a2, ATPase, Ca++ transporting, cardiac muscle, slow twitch 2, [RH, Score=1405, Expect=0.0]; ENSMUSG00000020788, Atp2a3, ATPase, Ca++ transporting, ubiquitous, [RH, Score=1367, Expect=0.0]} {Dmel: FBgn0263006, SERCA, Sarco/endoplasmic reticulum Ca(2+)-ATPase, [RH, Score=1469, Expect=0.0]} {Celegans: WBGene00004736, sca-1, Calcium-transporting ATPase, [RH, Score=1437, Expect=0.0]} {Smed: dd_Smed_v6_9529_0_1, dd_Smed_v6_9529_0_1, [RH, Score=1505, Expect=0.0]} {RNA1509_30303} {RNA1310_3909.1} {RNA815_955.1} |
| 3. | MligTC455_18427 | 453 | 9.43 | Mlig455_051696 | Neo: - Age: Down-Up-Up |
PLGRKT | 1.754 | - | - | 0.803 | 0.951 | - | - | Mlig455_051696 {REF} {Length: 1122} {TRANSSPLICED} {Pfam: Uncharacterised conserved protein (DUF2368) [PF10166.11, score=158.4]} {Human: ENSG00000107020, PLGRKT, plasminogen receptor with a C-terminal lysine, [RH, Score=103, Expect=8e-29]} {Mouse: ENSMUSG00000016495, Plgrkt, plasminogen receptor, C-terminal lysine transmembrane protein, [RH, Score=107, Expect=4e-30]} {Celegans: WBGene00044322, tag-280, [Score=43.9, Expect=4e-06]} {RNA1509_19636} {RNA1310_48798} {RNA815_29796} |
| 4. | MligTC455_15471 | 310 | 6.45 | Mlig455_022527 | Neo: Irradiation Age: logFC(26M/2M)=0.502 Region-enriched R5: 3.024/0.00001 |
CHEK1 | 1.748 | - | - | 0.784 | 0.964 | - | - | Mlig455_022527 {REF} {Length: 2924} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=7e-62]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=3e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1310_7988, RNA1509_12170, RNA1509_35656, RNA1509_43198} {RNA1509_12170, RNA1509_35656, RNA1509_43198, RNA815_13053} |
| 5. | MligTC455_51812 | 291 | 6.07 | Mlig455_055926 | Neo: - Age: - Region-enriched R5: 1.948/0.03728 |
RAB29 | 1.714 | - | - | 0.763 | 0.951 | - | - | Mlig455_055926 {REF} {Length: 1687} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=158.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.1]; ADP-ribosylation factor family [PF00025.23, score=54.0]; 50S ribosome-binding GTPase [PF01926.25, score=19.7]; Gtr1/RagA G protein conserved region [PF04670.14, score=18.7]} {Human: ENSG00000117280, RAB29, RAB29, member RAS oncogene family, [RH, Score=225, Expect=1e-74]} {Mouse: ENSMUSG00000026433, Rab29, RAB29, member RAS oncogene family, [RH, Score=222, Expect=2e-73]} {Dmel: FBgn0002567, Rab32, [Score=206, Expect=4e-67]} {Celegans: WBGene00011083, glo-1, Gut granule LOss; Rab GTPase GLO-1, [Score=182, Expect=5e-58]} {Smed: dd_Smed_v6_2915_0_1, dd_Smed_v6_2915_0_1, [RH, Score=234, Expect=1e-78]} {RNA1509_51771} {RNA1310_15012} {RNA815_16250.2} |
| 6. | MligTC455_49378 | 301 | 6.27 | Mlig455_044613 | Neo: Irradiation Age: Up-Down-Down |
SLC2A12 | 0.986 | - | - | - | - | 0.986 | - | Mlig455_044613 {REF} {Length: 3832} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=303.8]; Major Facilitator Superfamily [PF07690.18, score=104.7]} {Human: ENSG00000146411, SLC2A12, solute carrier family 2 member 12, [RH, Score=296, Expect=5e-91]} {Mouse: ENSMUSG00000037490, Slc2a12, solute carrier family 2 (facilitated glucose transporter), member 12, [RH, Score=290, Expect=6e-89]} {Dmel: FBgn0033644, Tret1-2, Trehalose transporter 1-2, [Score=147, Expect=5e-38]} {Celegans: WBGene00010811, hmit-1.3, H(+) MyoInositol coTransporter, [Score=184, Expect=4e-50]} {Smed: dd_Smed_v6_10218_0_2, dd_Smed_v6_10218_0_2, [Score=180, Expect=4e-49]} {RNA1509_20175} {RNA1310_8567, RNA1509_20175} {RNA1509_20175, RNA815_9686} |
| 7. | MligTC455_34385 | 560 | 11.67 | Mlig455_069293 | Neo: - Age: - |
0.975 | - | - | - | 0.975 | - | - | Mlig455_069293 {REF} {Length: 746} {NoTransDecoderORF} {RNA1509_8159} {RNA1310_62613} {RNA815_34878.1} | |
| 8. | MligTC455_34672 | 146 | 3.04 | Mlig455_043140 | Neo: - Age: - Region-enriched R4: 2.881/0.01915 |
NR5A2 | 0.973 | - | - | - | - | 0.973 | - | Mlig455_043140 {REF} {Length: 4361} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=87.7]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=60.8]} {Human: ENSG00000116833, NR5A2, nuclear receptor subfamily 5 group A member 2, [RH, Score=191, Expect=3e-52]} {Mouse: ENSMUSG00000026398, Nr5a2, nuclear receptor subfamily 5, group A, member 2, [Score=191, Expect=5e-53]} {Dmel: FBgn0261239, Hr39, Hormone receptor-like in 39, [RH, Score=159, Expect=1e-40]} {Celegans: WBGene00003623, nhr-25, Nuclear hormone receptor family member nhr-25, [RH, Score=133, Expect=1e-32]} {Smed: dd_Smed_v6_10427_0_1, dd_Smed_v6_10427_0_1, [RH, Score=365, Expect=2e-115]} {RNA1509_9824} {RNA1310_2216.1, RNA1509_9824} {RNA1509_9824, RNA815_6724.1} |
| 9. | MligTC455_48464 | 642 | 13.37 | Mlig455_014363, Mlig455_034468 | Neo: - Age: Down-Up-Down Region-enriched R3: 1.858/0.00148 |
WASHC1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_014363 {REF} {Length: 2191} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=119.9]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [Score=123, Expect=6e-30]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [Score=125, Expect=8e-31]} {Dmel: FBgn0033692, wash, washout, [RH, Score=76.6, Expect=1e-14]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [Score=65.5, Expect=1e-11]} {RNA1509_20623} {RNA1310_37341} {RNA815_18278} Mlig455_034468 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: WAHD domain of WASH complex [PF11945.10, score=153.5]} {Human: ENSG00000181404, WASHC1, WASH complex subunit 1, [Score=147, Expect=2e-38]} {Mouse: ENSMUSG00000024101, Washc1, WASH complex subunit 1, [Score=151, Expect=8e-40]} {Dmel: FBgn0033692, wash, washout, [RH, Score=90.5, Expect=4e-19]} {Smed: dd_Smed_v6_6355_0_1, dd_Smed_v6_6355_0_1, [Score=96.7, Expect=4e-22]} {RNA1509_20623, RNA1509_44526} {RNA1310_37341, RNA1509_20623, RNA1509_44526} {RNA1509_20623, RNA1509_44526, RNA815_18278} |
| 10. | MligTC455_12881 | 431 | 8.97 | Mlig455_069109 | Neo: - |
CYLD | 0.961 | - | - | - | 0.961 | - | - | Mlig455_069109 {REF} {Length: 5402} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=29.6]} {Human: ENSG00000083799, CYLD, CYLD lysine 63 deubiquitinase, [RH, Score=296, Expect=2e-86]} {Mouse: ENSMUSG00000036712, Cyld, CYLD lysine 63 deubiquitinase, [Score=287, Expect=3e-83]} {Dmel: FBgn0032210, CYLD, Cylindromatosis, [RH, Score=323, Expect=2e-99]} {Celegans: WBGene00009594, cyld-1, CYLinDromatosis (Human disease gene) homolog, [RH, Score=210, Expect=1e-56]} {Smed: dd_Smed_v6_3043_0_1, dd_Smed_v6_3043_0_1, [RH, Score=158, Expect=8e-40]} {RNA1509_18711, RNA1509_19340, RNA1509_34756, RNA1509_35847} {RNA1310_5613.1, RNA1509_19340, RNA1509_34756, RNA1509_35847} {RNA1509_19340, RNA1509_34756, RNA1509_35847, RNA815_1700} |
| 11. | MligTC455_34592 | 616 | 12.83 | Mlig455_059606 | Neo: - Age: - |
GMDS | 0.957 | - | - | - | 0.957 | - | - | Mlig455_059606 {REF} {Length: 3554} {TRANSSPLICED} {Pfam: GDP-mannose 4,6 dehydratase [PF16363.7, score=508.6]; NAD dependent epimerase/dehydratase family [PF01370.23, score=255.9]; RmlD substrate binding domain [PF04321.19, score=28.4]; Polysaccharide biosynthesis protein [PF02719.17, score=25.0]} {Human: ENSG00000112699, GMDS, GDP-mannose 4,6-dehydratase, [RH, Score=513, Expect=0.0]} {Mouse: ENSMUSG00000038372, Gmds, GDP-mannose 4, 6-dehydratase, [RH, Score=514, Expect=0.0]} {Dmel: FBgn0031661, Gmd, GDP-mannose 4,6-dehydratase, [RH, Score=526, Expect=0.0]} {Celegans: WBGene00000266, bre-1, GDP-mannose 4,6 dehydratase 1, [RH, Score=521, Expect=0.0]} {Smed: dd_Smed_v6_5709_0_1, dd_Smed_v6_5709_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_9794} {RNA1310_25100} {RNA815_2155} |
| 12. | MligTC455_48893 | 851 | 17.72 | Mlig455_008345 | Neo: - Age: Down-Up-Down Regeneration-downregulated BL: -3.366 Regeneration-depleted BL: -3.366 |
0.957 | - | - | - | 0.957 | - | - | Mlig455_008345 {REF} {Length: 572} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_15367} {RNA1310_27333.1, RNA1509_15367} {RNA1509_15367, RNA815_31156} | |
| 13. | MligTC455_39553 | 478 | 9.95 | Mlig455_069570 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.662/0.00444 |
B3GNT5 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_069570 {REF} {Length: 3770} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=125.3]} {Human: ENSG00000176597, B3GNT5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [RH, Score=130, Expect=3e-33]; ENSG00000198488, B3GNT6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6, [RH, Score=124, Expect=6e-31]} {Mouse: ENSMUSG00000074004, B3gnt6, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase), [Score=118, Expect=6e-29]; ENSMUSG00000079445, B3gnt7, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7, [Score=117, Expect=1e-28]; ENSMUSG00000022686, B3gnt5, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5, [Score=114, Expect=1e-27]; ENSMUSG00000029431, B3gnt4, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4, [Score=113, Expect=1e-27]} {Dmel: FBgn0000221, brn, brainiac, [Score=133, Expect=3e-35]} {Celegans: WBGene00000270, bre-5, Beta-1,3-galactosyltransferase bre-5, [Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_8163_0_1, dd_Smed_v6_8163_0_1, [RH, Score=243, Expect=4e-76]} {RNA1509_8889} {RNA1310_13743.1} {RNA815_1518.2} |
| 14. | MligTC455_46544 | 4871 | 101.48 | Mlig455_017372 | Neo: - Age: - Region-enriched R4: 1.234/0.00612 |
NDUFB2 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_017372 {REF} {Length: 622} {TRANSSPLICED} {Pfam: NADH dehydrogenase 1 beta subcomplex subunit 2 [PF14813.8, score=73.6]} {Human: ENSG00000090266, NDUFB2, NADH:ubiquinone oxidoreductase subunit B2, [RH, Score=67.8, Expect=2e-15]} {Mouse: ENSMUSG00000002416, Ndufb2, NADH:ubiquinone oxidoreductase subunit B2, [RH, Score=66.2, Expect=5e-15]} {Dmel: FBgn0058002, ND-AGGG, NADH dehydrogenase (ubiquinone) AGGG subunit, [RH, Score=55.1, Expect=5e-11]} {RNA1509_13388, RNA1509_34288, RNA1509_43401} {RNA1310_52799, RNA1509_13388, RNA1509_34288, RNA1509_43401} {RNA1509_13388, RNA1509_34288, RNA1509_43401, RNA815_26877} |
| 15. | MligTC455_24595 | 95 | 1.98 | Mlig455_007755, Mlig455_042852 | Neo: - Age: logFC(26M/2M)=0.563 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_007755 {REF} {Length: 2174} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_48697} {RNA1310_71854, RNA1509_48697} {RNA1509_48697, RNA815_131.1} Mlig455_042852 {REF} {Length: 82} {NoTransDecoderORF} {RNA1509_48697} {RNA1310_117468} {RNA815_40477} |
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