TomoSeq data search

Data search

Results for MligTC455_24650

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24650	14	0.30	Mlig455_065199	Neo: - Age: -		Mlig455_065199 {REF} {Length: 4418} {Pfam: Integrase core domain [PF00665.28, score=52.9]} {Smed: dd_Smed_v6_45837_0_1, dd_Smed_v6_45837_0_1, [Score=46.2, Expect=8e-07]} {RNA1509_35604} {RNA1310_27473} {RNA815_26012}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_24650

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.03	0.767	1.00000	1.00000
RegionR2	4.476	0.767	0.01678	0.13755
RegionR3	2.01	0.767	0.05444	0.40930
RegionR4	-0.066	0.767	0.98413	1.00000
RegionR5	-1.09	0.767	0.88487	1.00000
RegionR6	-1.08	0.767	1.00000	1.00000
RegionR7	-1.466	0.767	0.99990	1.00000
RegionR8	3.246	0.767	0.23646	0.85227

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.584	0.767	0.99987	1.00000
RegenerationR2	3.005	0.767	0.00538	0.11585
RegenerationR3	1.614	0.767	0.99358	1.00000
RegenerationR4	2.5	0.767	0.01195	0.16809
RegenerationR5	3.394	0.767	0.01507	0.21345
RegenerationR6	4.293	0.767	0.99981	1.00000
RegenerationBL	2.412	0.767	0.99991	1.00000
RegenerationTP	4.146	0.767	0.02644	0.27377

Genes with expression patterns similar to MligTC455_24650

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24650	14	0.3	Mlig455_065199	Neo: - Age: -		2	1.000	1.000	-	-	-	-	Mlig455_065199 {REF} {Length: 4418} {Pfam: Integrase core domain [PF00665.28, score=52.9]} {Smed: dd_Smed_v6_45837_0_1, dd_Smed_v6_45837_0_1, [Score=46.2, Expect=8e-07]} {RNA1509_35604} {RNA1310_27473} {RNA815_26012}
2.	MligTC455_29681	43	0.89	Mlig455_031785	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=-0.351	ABCA5	0.979	-	0.979	-	-	-	-	Mlig455_031785 {REF} {Length: 9241} {Pfam: ABC transporter [PF00005.29, score=177.5]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=64.7]; ABC-2 family transporter protein [PF12698.9, score=47.4]; Mab-21 protein [PF03281.16, score=41.5]; Ankyrin repeats (3 copies) [PF12796.9, score=39.5]; Ankyrin repeats (many copies) [PF13637.8, score=36.7]; Ankyrin repeats (many copies) [PF13857.8, score=36.2]; RecF/RecN/SMC N terminal domain [PF02463.21, score=31.9]; Ankyrin repeat [PF00023.32, score=28.0]; Ankyrin repeat [PF13606.8, score=27.7]; RsgA GTPase [PF03193.18, score=26.0]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=22.1]; P-loop containing region of AAA domain [PF13555.8, score=20.9]; Domain of unknown function (DUF4162) [PF13732.8, score=20.7]; AAA ATPase domain [PF13175.8, score=19.4]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=241, Expect=4e-63]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=241, Expect=2e-63]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=237, Expect=6e-62]; ENSG00000154258, ABCA9, ATP binding cassette subfamily A member 9, [Score=230, Expect=1e-59]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=231, Expect=4e-60]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=227, Expect=5e-59]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=225, Expect=2e-58]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=223, Expect=6e-58]} {Dmel: FBgn0031170, CG1718, [Score=204, Expect=5e-52]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=214, Expect=2e-55]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [Score=214, Expect=3e-55]} {RNA1509_10079} {RNA1310_978} {RNA815_1686}
3.	MligTC455_38315	48	1	Mlig455_008808	Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 3.988/0.00620		0.965	-	0.965	-	-	-	-	Mlig455_008808 {REF} {Length: 1766} {RNA1509_4487, RNA1509_8864} {RNA1310_15807, RNA1509_8864} {RNA1509_8864, RNA815_6342}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_24650

0.3

Mlig455_065199

Neo: -

Age: -

1.000

MligTC455_29681

0.89

Mlig455_031785

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.351

ABCA5

0.979

Mlig455_031785 {REF} {Length: 9241} {Pfam: ABC transporter [PF00005.29, score=177.5]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=64.7]; ABC-2 family transporter protein [PF12698.9, score=47.4]; Mab-21 protein [PF03281.16, score=41.5]; Ankyrin repeats (3 copies) [PF12796.9, score=39.5]; Ankyrin repeats (many copies) [PF13637.8, score=36.7]; Ankyrin repeats (many copies) [PF13857.8, score=36.2]; RecF/RecN/SMC N terminal domain [PF02463.21, score=31.9]; Ankyrin repeat [PF00023.32, score=28.0]; Ankyrin repeat [PF13606.8, score=27.7]; RsgA GTPase [PF03193.18, score=26.0]; Putative exonuclease SbcCD, C subunit [PF13558.8, score=22.1]; P-loop containing region of AAA domain [PF13555.8, score=20.9]; Domain of unknown function (DUF4162) [PF13732.8, score=20.7]; AAA ATPase domain [PF13175.8, score=19.4]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000154265, ABCA5, ATP binding cassette subfamily A member 5, [Score=241, Expect=4e-63]; ENSG00000154263, ABCA10, ATP binding cassette subfamily A member 10, [Score=241, Expect=2e-63]; ENSG00000141338, ABCA8, ATP binding cassette subfamily A member 8, [Score=237, Expect=6e-62]; ENSG00000154258, ABCA9, ATP binding cassette subfamily A member 9, [Score=230, Expect=1e-59]} {Mouse: ENSMUSG00000018800, Abca5, ATP-binding cassette, sub-family A (ABC1), member 5, [Score=231, Expect=4e-60]; ENSMUSG00000041828, Abca8a, ATP-binding cassette, sub-family A (ABC1), member 8a, [Score=227, Expect=5e-59]; ENSMUSG00000041797, Abca9, ATP-binding cassette, sub-family A (ABC1), member 9, [Score=225, Expect=2e-58]; ENSMUSG00000020620, Abca8b, ATP-binding cassette, sub-family A (ABC1), member 8b, [Score=223, Expect=6e-58]} {Dmel: FBgn0031170, CG1718, [Score=204, Expect=5e-52]} {Celegans: WBGene00000022, abt-4, ABC Transporter family, [Score=214, Expect=2e-55]} {Smed: dd_Smed_v6_2300_0_2, dd_Smed_v6_2300_0_2, [Score=214, Expect=3e-55]} {RNA1509_10079} {RNA1310_978} {RNA815_1686}

MligTC455_38315

Mlig455_008808

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.988/0.00620

0.965

Mlig455_008808 {REF} {Length: 1766} {RNA1509_4487, RNA1509_8864} {RNA1310_15807, RNA1509_8864} {RNA1509_8864, RNA815_6342}