TomoSeq data search

Data search

Results for MligTC455_24700

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_24700	106	2.20	Mlig455_002277	Neo: - Age: Up-Up-Down	RPAP1	Mlig455_002277 {REF} {Length: 4332} {TRANSSPLICED} {Pfam: RPAP1-like, C-terminal [PF08620.12, score=87.3]; RPAP1-like, N-terminal [PF08621.12, score=37.2]} {Human: ENSG00000103932, RPAP1, RNA polymerase II associated protein 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000034032, Rpap1, RNA polymerase II associated protein 1, [RH, Score=192, Expect=7e-49]} {Dmel: FBgn0052104, CG32104, [RH, Score=90.9, Expect=5e-18]} {Smed: dd_Smed_v6_8971_0_1, dd_Smed_v6_8971_0_1, [RH, Score=84.3, Expect=4e-16]} {RNA1509_48382} {RNA1310_8433} {RNA815_11401.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24700

106

2.20

Mlig455_002277

Neo: -

Age: Up-Up-Down

RPAP1

Mlig455_002277 {REF} {Length: 4332} {TRANSSPLICED} {Pfam: RPAP1-like, C-terminal [PF08620.12, score=87.3]; RPAP1-like, N-terminal [PF08621.12, score=37.2]} {Human: ENSG00000103932, RPAP1, RNA polymerase II associated protein 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000034032, Rpap1, RNA polymerase II associated protein 1, [RH, Score=192, Expect=7e-49]} {Dmel: FBgn0052104, CG32104, [RH, Score=90.9, Expect=5e-18]} {Smed: dd_Smed_v6_8971_0_1, dd_Smed_v6_8971_0_1, [RH, Score=84.3, Expect=4e-16]} {RNA1509_48382} {RNA1310_8433} {RNA815_11401.1}

Cumulative graph for MligTC455_24700

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.931	2.011	0.32752	0.97502
RegionR2	1.521	2.011	0.10404	0.39766
RegionR3	-0.291	2.011	0.67975	1.00000
RegionR4	-1.444	2.011	0.10855	0.32480
RegionR5	0.194	2.011	0.76938	1.00000
RegionR6	-0.516	2.011	0.48932	1.00000
RegionR7	0.47	2.011	0.61160	1.00000
RegionR8	1.998	2.011	0.04435	0.41193

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.471	2.011	0.85467	1.00000
RegenerationR2	1.023	2.011	0.19986	0.64604
RegenerationR3	2.131	2.011	0.01280	0.20892
RegenerationR4	0.898	2.011	0.30854	0.74935
RegenerationR5	0.198	2.011	0.69719	0.95054
RegenerationR6	2.23	2.011	0.02019	0.17556
RegenerationBL	-3.052	2.011	0.25692	0.61394
RegenerationTP	0.165	2.011	0.84980	1.00000

Genes with expression patterns similar to MligTC455_24700

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24700	106	2.2	Mlig455_002277	Neo: - Age: Up-Up-Down	RPAP1	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_002277 {REF} {Length: 4332} {TRANSSPLICED} {Pfam: RPAP1-like, C-terminal [PF08620.12, score=87.3]; RPAP1-like, N-terminal [PF08621.12, score=37.2]} {Human: ENSG00000103932, RPAP1, RNA polymerase II associated protein 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000034032, Rpap1, RNA polymerase II associated protein 1, [RH, Score=192, Expect=7e-49]} {Dmel: FBgn0052104, CG32104, [RH, Score=90.9, Expect=5e-18]} {Smed: dd_Smed_v6_8971_0_1, dd_Smed_v6_8971_0_1, [RH, Score=84.3, Expect=4e-16]} {RNA1509_48382} {RNA1310_8433} {RNA815_11401.1}
2.	MligTC455_24701	111	2.32	Mlig455_002321	Neo: - Age: Up-Down-Down	RPAP1	3.925	1.000	1.000	-	0.946	-	0.979	Mlig455_002321 {REF} {Length: 4735} {TRANSSPLICED} {Pfam: RPAP1-like, C-terminal [PF08620.12, score=87.2]; RPAP1-like, N-terminal [PF08621.12, score=37.2]} {Human: ENSG00000103932, RPAP1, RNA polymerase II associated protein 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000034032, Rpap1, RNA polymerase II associated protein 1, [RH, Score=192, Expect=3e-49]} {Dmel: FBgn0052104, CG32104, [RH, Score=96.3, Expect=1e-19]} {Smed: dd_Smed_v6_8971_0_1, dd_Smed_v6_8971_0_1, [Score=80.1, Expect=7e-15]} {RNA1509_31024, RNA1509_48382} {RNA1310_8433, RNA1509_31024, RNA1509_48382} {RNA1509_31024, RNA1509_48382, RNA815_11401.1}
3.	MligTC455_36336	12	0.25	Mlig455_018830	Neo: - Age: -		0.957	-	-	-	-	0.957	-	Mlig455_018830 {REF} {Length: 1212} {NoTransDecoderORF} {RNA1509_31395} {RNA1310_37524.1} {RNA815_26316}
4.	MligTC455_20360	45	0.94	Mlig455_020098	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_020098 {REF} {Length: 2113} {RNA1509_51474} {RNA1310_43070} {RNA815_32077}