TomoSeq data search

Data search

Results for MligTC455_24701

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24701

111

2.32

Mlig455_002321

Neo: -

Age: Up-Down-Down

RPAP1

Mlig455_002321 {REF} {Length: 4735} {TRANSSPLICED} {Pfam: RPAP1-like, C-terminal [PF08620.12, score=87.2]; RPAP1-like, N-terminal [PF08621.12, score=37.2]} {Human: ENSG00000103932, RPAP1, RNA polymerase II associated protein 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000034032, Rpap1, RNA polymerase II associated protein 1, [RH, Score=192, Expect=3e-49]} {Dmel: FBgn0052104, CG32104, [RH, Score=96.3, Expect=1e-19]} {Smed: dd_Smed_v6_8971_0_1, dd_Smed_v6_8971_0_1, [Score=80.1, Expect=7e-15]} {RNA1509_31024, RNA1509_48382} {RNA1310_8433, RNA1509_31024, RNA1509_48382} {RNA1509_31024, RNA1509_48382, RNA815_11401.1}

Cumulative graph for MligTC455_24701

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.308	2.069	0.22943	0.87304
RegionR2	1.884	2.069	0.04530	0.25089
RegionR3	-0.356	2.069	0.60972	1.00000
RegionR4	-1.894	2.069	0.04067	0.16745
RegionR5	-0.015	2.069	0.92324	1.00000
RegionR6	-0.542	2.069	0.47195	1.00000
RegionR7	0.817	2.069	0.39277	1.00000
RegionR8	2.414	2.069	0.01739	0.25614

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.245	2.069	0.86492	1.00000
RegenerationR2	1.858	2.069	0.01178	0.17678
RegenerationR3	2.219	2.069	0.01042	0.18658
RegenerationR4	1.148	2.069	0.20308	0.64933
RegenerationR5	0.573	2.069	0.37833	0.78602
RegenerationR6	2.423	2.069	0.01136	0.13125
RegenerationBL	-3.308	2.069	0.21544	0.56079
RegenerationTP	0.053	2.069	0.92725	1.00000

Genes with expression patterns similar to MligTC455_24701

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24701	111	2.32	Mlig455_002321	Neo: - Age: Up-Down-Down	RPAP1	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_002321 {REF} {Length: 4735} {TRANSSPLICED} {Pfam: RPAP1-like, C-terminal [PF08620.12, score=87.2]; RPAP1-like, N-terminal [PF08621.12, score=37.2]} {Human: ENSG00000103932, RPAP1, RNA polymerase II associated protein 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000034032, Rpap1, RNA polymerase II associated protein 1, [RH, Score=192, Expect=3e-49]} {Dmel: FBgn0052104, CG32104, [RH, Score=96.3, Expect=1e-19]} {Smed: dd_Smed_v6_8971_0_1, dd_Smed_v6_8971_0_1, [Score=80.1, Expect=7e-15]} {RNA1509_31024, RNA1509_48382} {RNA1310_8433, RNA1509_31024, RNA1509_48382} {RNA1509_31024, RNA1509_48382, RNA815_11401.1}
2.	MligTC455_24700	106	2.2	Mlig455_002277	Neo: - Age: Up-Up-Down	RPAP1	3.925	1.000	1.000	-	0.946	-	0.979	Mlig455_002277 {REF} {Length: 4332} {TRANSSPLICED} {Pfam: RPAP1-like, C-terminal [PF08620.12, score=87.3]; RPAP1-like, N-terminal [PF08621.12, score=37.2]} {Human: ENSG00000103932, RPAP1, RNA polymerase II associated protein 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000034032, Rpap1, RNA polymerase II associated protein 1, [RH, Score=192, Expect=7e-49]} {Dmel: FBgn0052104, CG32104, [RH, Score=90.9, Expect=5e-18]} {Smed: dd_Smed_v6_8971_0_1, dd_Smed_v6_8971_0_1, [RH, Score=84.3, Expect=4e-16]} {RNA1509_48382} {RNA1310_8433} {RNA815_11401.1}
3.	MligTC455_51803	1043	21.73	Mlig455_039187	Neo: - Age: logFC(26M/2M)=-0.692	CHMP5	0.961	-	-	-	-	-	0.961	Mlig455_039187 {REF} {Length: 1356} {Pfam: Snf7 [PF03357.23, score=180.2]; Nucleopolyhedrovirus P10 protein [PF05531.14, score=20.0]} {Human: ENSG00000086065, CHMP5, charged multivesicular body protein 5, [RH, Score=292, Expect=1e-100]} {Mouse: ENSMUSG00000028419, Chmp5, charged multivesicular body protein 5, [RH, Score=292, Expect=7e-101]} {Dmel: FBgn0036740, Vps60, Vacuolar protein sorting 60, [RH, Score=278, Expect=2e-95]} {Celegans: WBGene00018290, vps-60, Related to yeast Vacuolar Protein Sorting factor, [RH, Score=271, Expect=4e-93]} {Smed: dd_Smed_v6_1158_0_1, dd_Smed_v6_1158_0_1, [RH, Score=342, Expect=3e-121]} {RNA1509_25388} {RNA1310_25926.1} {RNA815_8046}
4.	MligTC455_17269	486	10.13	Mlig455_025715, Mlig455_025767	Neo: - Age: Up-Down-Down	MAP3K3	0.956	-	-	-	-	0.956	-	Mlig455_025715 {REF} {Length: 8424} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=230.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.4]; PB1 domain [PF00564.26, score=24.9]; Fungal protein kinase [PF17667.3, score=22.9]; Kinase-like [PF14531.8, score=20.6]; ABC1 atypical kinase-like domain [PF03109.18, score=18.1]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=6e-105]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=341, Expect=1e-103]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=338, Expect=6e-103]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=336, Expect=5e-102]} {Dmel: FBgn0024329, Mekk1, [Score=163, Expect=3e-40]} {Celegans: WBGene00003822, nsy-1, Mitogen-activated protein kinase kinase kinase nsy-1, [Score=166, Expect=3e-41]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=281, Expect=1e-82]} {RNA1509_28700} {RNA1310_9149} {RNA815_5510} Mlig455_025767 {REF} {Length: 6531} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=232.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=151.4]; PB1 domain [PF00564.26, score=27.0]; Fungal protein kinase [PF17667.3, score=24.7]; Kinase-like [PF14531.8, score=23.5]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000198909, MAP3K3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=348, Expect=1e-112]; ENSG00000169967, MAP3K2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=345, Expect=3e-111]} {Mouse: ENSMUSG00000020700, Map3k3, mitogen-activated protein kinase kinase kinase 3, [RH, Score=344, Expect=4e-111]; ENSMUSG00000024383, Map3k2, mitogen-activated protein kinase kinase kinase 2, [RH, Score=340, Expect=9e-110]} {Dmel: FBgn0024329, Mekk1, [Score=166, Expect=2e-43]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=167, Expect=8e-45]} {Smed: dd_Smed_v6_9266_0_1, dd_Smed_v6_9266_0_1, [RH, Score=286, Expect=1e-89]} {RNA1509_34435, RNA1509_39187} {RNA1310_8418.1, RNA1509_34435, RNA1509_39187} {RNA1509_34435, RNA1509_39187, RNA815_5510}
5.	MligTC455_44148	11	0.22	Mlig455_023702	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_023702 {REF} {Length: 845} {RNA1509_57710} {RNA1310_63669, RNA1509_57710} {RNA1509_57710, RNA815_55739}

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