Data search
Results for MligTC455_24706
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_24706 | 481 | 10.01 | Mlig455_017149 | Neo: - |
UBA5 | Mlig455_017149 {REF} {Length: 2276} {Pfam: ThiF family [PF00899.23, score=41.7]} {Human: ENSG00000081307, UBA5, ubiquitin like modifier activating enzyme 5, [Score=249, Expect=5e-79]} {Mouse: ENSMUSG00000032557, Uba5, ubiquitin-like modifier activating enzyme 5, [Score=266, Expect=8e-85]} {Dmel: FBgn0030305, Uba5, Ubiquitin activating enzyme 5, [Score=258, Expect=6e-82]} {Celegans: WBGene00020184, uba-5, Ubiquitin-like modifier-activating enzyme 5, [Score=249, Expect=1e-78]} {Smed: dd_Smed_v6_2151_0_1, dd_Smed_v6_2151_0_1, [Score=244, Expect=7e-77]} {RNA1509_12394} {RNA1310_219} {RNA815_20144.2} |
Cumulative graph for MligTC455_24706
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.547 | 3.622 | 0.57777 | 1.00000 | |
| RegionR2 | -0.008 | 3.622 | 0.98813 | 1.00000 | |
| RegionR3 | -0.192 | 3.622 | 0.61145 | 1.00000 | |
| RegionR4 | -0.902 | 3.622 | 0.05187 | 0.19763 | |
| RegionR5 | 0.867 | 3.622 | 0.00488 | 0.03402 | |
| RegionR6 | -0.094 | 3.622 | 0.80532 | 1.00000 | |
| RegionR7 | 0.225 | 3.622 | 0.64301 | 1.00000 | |
| RegionR8 | -0.443 | 3.622 | 0.50060 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.083 | 3.622 | 0.26560 | 0.97007 | |
| RegenerationR2 | -0.438 | 3.622 | 0.28911 | 0.73211 | |
| RegenerationR3 | 0.104 | 3.622 | 0.81840 | 0.98704 | |
| RegenerationR4 | 0.213 | 3.622 | 0.65582 | 0.93575 | |
| RegenerationR5 | -0.211 | 3.622 | 0.57856 | 0.89976 | |
| RegenerationR6 | 0.106 | 3.622 | 0.81800 | 0.98595 | |
| RegenerationBL | -0.174 | 3.622 | 0.77683 | 1.00000 | |
| RegenerationTP | -1.078 | 3.622 | 0.13199 | 0.54621 |
Genes with expression patterns similar to MligTC455_24706
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_24706 | 481 | 10.01 | Mlig455_017149 | Neo: - |
UBA5 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017149 {REF} {Length: 2276} {Pfam: ThiF family [PF00899.23, score=41.7]} {Human: ENSG00000081307, UBA5, ubiquitin like modifier activating enzyme 5, [Score=249, Expect=5e-79]} {Mouse: ENSMUSG00000032557, Uba5, ubiquitin-like modifier activating enzyme 5, [Score=266, Expect=8e-85]} {Dmel: FBgn0030305, Uba5, Ubiquitin activating enzyme 5, [Score=258, Expect=6e-82]} {Celegans: WBGene00020184, uba-5, Ubiquitin-like modifier-activating enzyme 5, [Score=249, Expect=1e-78]} {Smed: dd_Smed_v6_2151_0_1, dd_Smed_v6_2151_0_1, [Score=244, Expect=7e-77]} {RNA1509_12394} {RNA1310_219} {RNA815_20144.2} |
| 2. | MligTC455_09959 | 2412 | 50.25 | Mlig455_043894 | Neo: Neoblast, stringent Age: - Region-enriched R5: 1.095/0.00000 Regeneration-upregulated BL: 1.261 Regeneration-enriched BL: 1.261 |
POLDIP3 | 0.962 | - | - | - | 0.962 | - | - | Mlig455_043894 {REF} {Length: 1920} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=41.8]} {Human: ENSG00000100227, POLDIP3, DNA polymerase delta interacting protein 3, [RH, Score=93.2, Expect=1e-20]} {Mouse: ENSMUSG00000041815, Poldip3, polymerase (DNA-directed), delta interacting protein 3, [RH, Score=96.7, Expect=4e-22]} {Dmel: FBgn0030959, CG6961, [RH, Score=74.3, Expect=2e-14]} {Smed: dd_Smed_v6_6532_0_1, dd_Smed_v6_6532_0_1, [RH, Score=76.3, Expect=2e-15]} {RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713} {RNA1310_21831.1, RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713} {RNA1509_14719, RNA1509_17352, RNA1509_32454, RNA1509_35298, RNA1509_55393, RNA1509_56206, RNA1509_9713, RNA815_6046} |
| 3. | MligTC455_45652 | 445 | 9.27 | Mlig455_067879 | Neo: - Age: - |
SCYL2 | 0.957 | - | 0.957 | - | - | - | - | Mlig455_067879 {REF} {Length: 4355} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=54.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=34.3]} {Human: ENSG00000136021, SCYL2, SCY1 like pseudokinase 2, [RH, Score=668, Expect=0.0]} {Mouse: ENSMUSG00000069539, Scyl2, SCY1-like 2 (S. cerevisiae), [RH, Score=672, Expect=0.0]} {Dmel: FBgn0039623, CG1951, [RH, Score=587, Expect=0.0]} {Celegans: WBGene00022635, ZC581.9, [RH, Score=179, Expect=3e-46]} {Smed: dd_Smed_v6_5612_0_1, dd_Smed_v6_5612_0_1, [RH, Score=667, Expect=0.0]} {RNA1509_11052, RNA1509_34278} {RNA1310_4168, RNA1509_34278} {RNA1509_34278, RNA815_3795} |
| 4. | MligTC455_33067 | 269 | 5.6 | Mlig455_068377 | Neo: - Age: - |
LNX2 | 0.956 | - | - | 0.956 | - | - | - | Mlig455_068377 {REF} {Length: 6386} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=175.4]; PDZ domain [PF17820.3, score=98.5]; PDZ domain [PF13180.8, score=58.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.3]; RING-type zinc-finger [PF13445.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.3]; TRAF-type zinc finger [PF02176.20, score=22.8]; zinc-RING finger domain [PF14634.8, score=22.8]; Ring finger domain [PF13639.8, score=21.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=18.8]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [RH, Score=423, Expect=7e-136]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [RH, Score=417, Expect=1e-133]} {Dmel: FBgn0001624, dlg1, discs large 1, [Score=62.0, Expect=2e-09]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=147, Expect=2e-37]} {Smed: dd_Smed_v6_5467_0_1, dd_Smed_v6_5467_0_1, [RH, Score=548, Expect=0.0]} {RNA1509_28565, RNA1509_29541} {RNA1310_6562.1, RNA1509_28565, RNA1509_29541} {RNA1509_28565, RNA1509_29541, RNA815_20023} |
| 5. | MligTC455_17929 | 1110 | 23.12 | Mlig455_049025, Mlig455_051565 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.399 Region-enriched R4: 1.396/0.01452 |
CRIPT | 0.955 | - | - | - | 0.955 | - | - | Mlig455_049025 {REF} {Length: 618} {TRANSSPLICED} {Pfam: Microtubule-associated protein CRIPT [PF10235.11, score=115.8]; Uncharacterized conserved protein (DUF2039) [PF10217.11, score=23.7]} {Human: ENSG00000119878, CRIPT, CXXC repeat containing interactor of PDZ3 domain, [RH, Score=147, Expect=4e-47]} {Mouse: ENSMUSG00000024146, Cript, cysteine-rich PDZ-binding protein, [RH, Score=147, Expect=1e-47]} {Dmel: FBgn0032153, CG4537, [RH, Score=116, Expect=3e-35]} {Celegans: WBGene00044614, C36B1.14, [RH, Score=72.4, Expect=5e-18]} {Smed: dd_Smed_v6_3121_0_1, dd_Smed_v6_3121_0_1, [RH, Score=84.0, Expect=2e-22]} {RNA1509_59797} {RNA1310_51705.2, RNA1509_59797} {RNA1509_59797, RNA815_26934} Mlig455_051565 {REF} {Length: 618} {TRANSSPLICED} {Pfam: Microtubule-associated protein CRIPT [PF10235.11, score=115.8]; Uncharacterized conserved protein (DUF2039) [PF10217.11, score=23.7]} {Human: ENSG00000119878, CRIPT, CXXC repeat containing interactor of PDZ3 domain, [RH, Score=147, Expect=4e-47]} {Mouse: ENSMUSG00000024146, Cript, cysteine-rich PDZ-binding protein, [RH, Score=147, Expect=1e-47]} {Dmel: FBgn0032153, CG4537, [RH, Score=116, Expect=3e-35]} {Celegans: WBGene00044614, C36B1.14, [RH, Score=72.4, Expect=5e-18]} {Smed: dd_Smed_v6_3121_0_1, dd_Smed_v6_3121_0_1, [RH, Score=84.0, Expect=2e-22]} {RNA1509_59797} {RNA1310_51705.2} {RNA815_26934} |
| 6. | MligTC455_35594 | 755 | 15.73 | Mlig455_063913 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.683 |
HNRNPC | 0.951 | - | - | - | 0.951 | - | - | Mlig455_063913 {REF} {Length: 2459} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=44.6]} {Human: ENSG00000092199, HNRNPC, heterogeneous nuclear ribonucleoprotein C (C1/C2), [Score=97.4, Expect=2e-23]; ENSG00000179172, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [Score=92.8, Expect=1e-20]; ENSG00000283292, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [Score=92.8, Expect=2e-20]; ENSG00000282175, HNRNPCL1, heterogeneous nuclear ribonucleoprotein C-like 1, [Score=92.8, Expect=1e-20]; ENSG00000179412, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [Score=92.8, Expect=2e-20]; ENSG00000277058, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [Score=92.8, Expect=2e-20]; ENSG00000273865, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [Score=92.8, Expect=2e-20]; ENSG00000282095, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [Score=92.8, Expect=2e-20]; ENSG00000283231, HNRNPCL4, heterogeneous nuclear ribonucleoprotein C-like 4, [Score=92.8, Expect=2e-20]; ENSG00000282559, HNRNPCL3, heterogeneous nuclear ribonucleoprotein C-like 3, [Score=92.8, Expect=2e-20]} {Mouse: ENSMUSG00000060373, Hnrnpc, heterogeneous nuclear ribonucleoprotein C, [Score=97.4, Expect=2e-22]; ENSMUSG00000027593, Raly, hnRNP-associated with lethal yellow, [Score=92.8, Expect=2e-20]} {Dmel: FBgn0259935, CG42458, [Score=87.4, Expect=4e-18]} {Celegans: WBGene00020399, ztf-4, Zinc finger putative Transcription Factor family, [Score=79.7, Expect=3e-16]} {RNA1509_17287, RNA1509_29118} {RNA1310_12537.1, RNA1509_29118} {RNA1509_29118, RNA815_24622} |
| 7. | MligTC455_33499 | 214 | 4.47 | Mlig455_012502, Mlig455_012590 | Neo: Irradiation Age: Down-Up-Up Region-specific R5: 5.580 Region-enriched R5: 4.822/0.00000 Regeneration-upregulated R4: 5.019 Regeneration-enriched R4: 5.019 |
PPP1R3C | 0.95 | - | 0.950 | - | - | - | - | Mlig455_012502 {REF} {Length: 2777} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=48.6]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=35.4]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=65.5, Expect=4e-11]; ENSG00000132825, PPP1R3D, protein phosphatase 1 regulatory subunit 3D, [Score=65.5, Expect=3e-11]} {Mouse: ENSMUSG00000049999, Ppp1r3d, protein phosphatase 1, regulatory subunit 3D, [Score=72.4, Expect=7e-14]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=77.8, Expect=5e-15]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=71.6, Expect=1e-13]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [Score=82.0, Expect=3e-17]} {RNA1509_41702} {RNA1310_12486} {RNA815_7332} Mlig455_012590 {REF} {Length: 2975} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=48.9]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=35.3]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=66.6, Expect=2e-11]; ENSG00000132825, PPP1R3D, protein phosphatase 1 regulatory subunit 3D, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000049999, Ppp1r3d, protein phosphatase 1, regulatory subunit 3D, [Score=70.1, Expect=4e-13]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=77.8, Expect=4e-15]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=71.6, Expect=1e-13]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [Score=83.2, Expect=1e-17]} {RNA1509_34372, RNA1509_41702} {RNA1310_12486, RNA1509_34372} {RNA1509_34372, RNA815_7332} |
| 8. | MligTC455_33736 | 411 | 8.56 | Mlig455_052584 | Neo: - Age: - Region-enriched R4: 1.761/0.01390 |
NCAPH | 0.95 | - | - | - | 0.950 | - | - | Mlig455_052584 {REF} {Length: 3065} {Pfam: Condensin complex subunit 2 [PF05786.16, score=100.6]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [RH, Score=79.3, Expect=1e-16]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=84.0, Expect=1e-16]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [Score=66.2, Expect=2e-11]} {RNA1509_16625} {RNA1310_5603.1} {RNA815_11680} |
Berezikov Lab - 2020-2021 © ERIBA