TomoSeq data search

Data search

Results for MligTC455_33067

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_33067	269	5.60	Mlig455_068377	Neo: - Age: -	LNX2	Mlig455_068377 {REF} {Length: 6386} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=175.4]; PDZ domain [PF17820.3, score=98.5]; PDZ domain [PF13180.8, score=58.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.3]; RING-type zinc-finger [PF13445.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.3]; TRAF-type zinc finger [PF02176.20, score=22.8]; zinc-RING finger domain [PF14634.8, score=22.8]; Ring finger domain [PF13639.8, score=21.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=18.8]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [RH, Score=423, Expect=7e-136]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [RH, Score=417, Expect=1e-133]} {Dmel: FBgn0001624, dlg1, discs large 1, [Score=62.0, Expect=2e-09]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=147, Expect=2e-37]} {Smed: dd_Smed_v6_5467_0_1, dd_Smed_v6_5467_0_1, [RH, Score=548, Expect=0.0]} {RNA1509_28565, RNA1509_29541} {RNA1310_6562.1, RNA1509_28565, RNA1509_29541} {RNA1509_28565, RNA1509_29541, RNA815_20023}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33067

269

5.60

Mlig455_068377

Neo: -

Age: -

LNX2

Mlig455_068377 {REF} {Length: 6386} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=175.4]; PDZ domain [PF17820.3, score=98.5]; PDZ domain [PF13180.8, score=58.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.3]; RING-type zinc-finger [PF13445.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.3]; TRAF-type zinc finger [PF02176.20, score=22.8]; zinc-RING finger domain [PF14634.8, score=22.8]; Ring finger domain [PF13639.8, score=21.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=18.8]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [RH, Score=423, Expect=7e-136]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [RH, Score=417, Expect=1e-133]} {Dmel: FBgn0001624, dlg1, discs large 1, [Score=62.0, Expect=2e-09]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=147, Expect=2e-37]} {Smed: dd_Smed_v6_5467_0_1, dd_Smed_v6_5467_0_1, [RH, Score=548, Expect=0.0]} {RNA1509_28565, RNA1509_29541} {RNA1310_6562.1, RNA1509_28565, RNA1509_29541} {RNA1509_28565, RNA1509_29541, RNA815_20023}

Cumulative graph for MligTC455_33067

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.052	2.993	0.97271	1.00000
RegionR2	0.342	2.993	0.60502	0.95420
RegionR3	-0.624	2.993	0.29524	0.83718
RegionR4	-0.207	2.993	0.76510	1.00000
RegionR5	-0.35	2.993	0.51802	0.88093
RegionR6	-0.311	2.993	0.60509	1.00000
RegionR7	0.747	2.993	0.26792	0.89848
RegionR8	0.454	2.993	0.60098	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.001	2.993	0.24506	0.96633
RegenerationR2	-0.211	2.993	0.70419	0.95780
RegenerationR3	0.782	2.993	0.23383	0.66824
RegenerationR4	0.287	2.993	0.66707	0.94121
RegenerationR5	0.709	2.993	0.23951	0.67346
RegenerationR6	-0.027	2.993	0.96939	1.00000
RegenerationBL	-0.783	2.993	0.32309	0.68991
RegenerationTP	0.067	2.993	0.92900	1.00000

Genes with expression patterns similar to MligTC455_33067

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33067	269	5.6	Mlig455_068377	Neo: - Age: -	LNX2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_068377 {REF} {Length: 6386} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=175.4]; PDZ domain [PF17820.3, score=98.5]; PDZ domain [PF13180.8, score=58.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.3]; RING-type zinc-finger [PF13445.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.3]; TRAF-type zinc finger [PF02176.20, score=22.8]; zinc-RING finger domain [PF14634.8, score=22.8]; Ring finger domain [PF13639.8, score=21.2]; zinc finger of C3HC4-type, RING [PF15227.8, score=18.8]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [RH, Score=423, Expect=7e-136]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [RH, Score=417, Expect=1e-133]} {Dmel: FBgn0001624, dlg1, discs large 1, [Score=62.0, Expect=2e-09]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=147, Expect=2e-37]} {Smed: dd_Smed_v6_5467_0_1, dd_Smed_v6_5467_0_1, [RH, Score=548, Expect=0.0]} {RNA1509_28565, RNA1509_29541} {RNA1310_6562.1, RNA1509_28565, RNA1509_29541} {RNA1509_28565, RNA1509_29541, RNA815_20023}
2.	MligTC455_23195	326	6.79	Mlig455_041698	Neo: - Age: Down-Up-Down	SLC35C1	0.956	-	-	-	-	-	0.956	Mlig455_041698 {REF} {Length: 1648} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=69.7]; EamA-like transporter family [PF00892.22, score=30.9]} {Human: ENSG00000181830, SLC35C1, solute carrier family 35 member C1, [RH, Score=333, Expect=2e-112]} {Mouse: ENSMUSG00000049922, Slc35c1, solute carrier family 35, member C1, [Score=348, Expect=2e-118]} {Dmel: FBgn0265351, nac, neuronally altered carbohydrate, [Score=276, Expect=1e-90]} {Celegans: WBGene00008237, nstp-10, GDP-fucose transporter, [RH, Score=338, Expect=2e-114]} {Smed: dd_Smed_v6_12626_0_1, dd_Smed_v6_12626_0_1, [RH, Score=330, Expect=2e-112]} {RNA1509_16046} {RNA1310_14558.1} {RNA815_9070}
3.	MligTC455_24706	481	10.01	Mlig455_017149	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.293	UBA5	0.956	-	-	0.956	-	-	-	Mlig455_017149 {REF} {Length: 2276} {Pfam: ThiF family [PF00899.23, score=41.7]} {Human: ENSG00000081307, UBA5, ubiquitin like modifier activating enzyme 5, [Score=249, Expect=5e-79]} {Mouse: ENSMUSG00000032557, Uba5, ubiquitin-like modifier activating enzyme 5, [Score=266, Expect=8e-85]} {Dmel: FBgn0030305, Uba5, Ubiquitin activating enzyme 5, [Score=258, Expect=6e-82]} {Celegans: WBGene00020184, uba-5, Ubiquitin-like modifier-activating enzyme 5, [Score=249, Expect=1e-78]} {Smed: dd_Smed_v6_2151_0_1, dd_Smed_v6_2151_0_1, [Score=244, Expect=7e-77]} {RNA1509_12394} {RNA1310_219} {RNA815_20144.2}
4.	MligTC455_54140	133	2.77	Mlig455_029364	Neo: - Age: logFC(26M/2M)=0.332	WHRN	0.953	-	-	-	-	-	0.953	Mlig455_029364 {REF} {Length: 4002} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=132.0]; PDZ domain [PF17820.3, score=93.5]; PDZ domain [PF13180.8, score=52.4]} {Human: ENSG00000095397, WHRN, whirlin, [RH, Score=205, Expect=8e-55]} {Mouse: ENSMUSG00000039137, Whrn, whirlin, [RH, Score=204, Expect=8e-55]} {Dmel: FBgn0264006, dysc, dyschronic, [RH, Score=160, Expect=5e-40]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [Score=67.4, Expect=3e-11]} {Smed: dd_Smed_v6_17308_0_1, dd_Smed_v6_17308_0_1, [RH, Score=85.9, Expect=4e-17]} {RNA1509_25200} {RNA1310_5209.1, RNA1509_25200} {RNA1509_25200, RNA815_5120}
5.	MligTC455_29609	271	5.64	Mlig455_059930	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_059930 {REF} {Length: 2573} {TRANSSPLICED} {RNA1509_15693} {RNA1310_30603, RNA1509_15693} {RNA1509_15693, RNA815_16223}