TomoSeq data search

Data search

Results for MligTC455_24718

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24718

65

1.35

Mlig455_015385

Neo: -

Age: -

COG7

Mlig455_015385 {REF} {Length: 4070} {Pfam: Golgi complex component 7 (COG7) [PF10191.11, score=297.7]} {Human: ENSG00000168434, COG7, component of oligomeric golgi complex 7, [RH, Score=217, Expect=2e-59]} {Mouse: ENSMUSG00000034951, Cog7, component of oligomeric golgi complex 7, [RH, Score=210, Expect=3e-57]} {Dmel: FBgn0051040, Cog7, [RH, Score=141, Expect=2e-34]} {Smed: dd_Smed_v6_3661_0_1, dd_Smed_v6_3661_0_1, [RH, Score=241, Expect=2e-68]} {RNA1509_16994} {RNA1310_8228.1} {RNA815_3568}

Cumulative graph for MligTC455_24718

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.717	1.53	0.23093	0.87484
RegionR2	2.943	1.53	0.03959	0.23100
RegionR3	0.637	1.53	0.58441	1.00000
RegionR4	-1.116	1.53	0.99267	1.00000
RegionR5	0.489	1.53	0.66085	1.00000
RegionR6	-0.24	1.53	0.92795	1.00000
RegionR7	2.514	1.53	0.04916	0.42633
RegionR8	0.489	1.53	0.76766	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.018	1.53	1.00000	1.00000
RegenerationR2	-1.378	1.53	0.20364	0.65039
RegenerationR3	1.125	1.53	0.31887	0.74724
RegenerationR4	0.864	1.53	0.44972	0.84168
RegenerationR5	0.994	1.53	0.29576	0.72302
RegenerationR6	0.082	1.53	0.96342	1.00000
RegenerationBL	2.272	1.53	0.07488	0.31992
RegenerationTP	1.528	1.53	0.28551	0.73204

Genes with expression patterns similar to MligTC455_24718

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24718	65	1.35	Mlig455_015385	Neo: - Age: -	COG7	5	1.000	1.000	1.000	-	1.000	1.000	Mlig455_015385 {REF} {Length: 4070} {Pfam: Golgi complex component 7 (COG7) [PF10191.11, score=297.7]} {Human: ENSG00000168434, COG7, component of oligomeric golgi complex 7, [RH, Score=217, Expect=2e-59]} {Mouse: ENSMUSG00000034951, Cog7, component of oligomeric golgi complex 7, [RH, Score=210, Expect=3e-57]} {Dmel: FBgn0051040, Cog7, [RH, Score=141, Expect=2e-34]} {Smed: dd_Smed_v6_3661_0_1, dd_Smed_v6_3661_0_1, [RH, Score=241, Expect=2e-68]} {RNA1509_16994} {RNA1310_8228.1} {RNA815_3568}
2.	MligTC455_32011	104	2.18	Mlig455_027366	Neo: - Age: - Region-enriched R5: 3.000/0.00093	EXT1	1.692	-	-	-	-	0.975	0.717	Mlig455_027366 {REF} {Length: 3069} {TRANSSPLICED} {Pfam: Exostosin family [PF03016.17, score=191.2]; Glycosyl transferase family 64 domain [PF09258.12, score=69.6]} {Human: ENSG00000182197, EXT1, exostosin glycosyltransferase 1, [RH, Score=443, Expect=9e-145]} {Mouse: ENSMUSG00000061731, Ext1, exostoses (multiple) 1, [RH, Score=444, Expect=3e-145]} {Dmel: FBgn0265974, ttv, tout-velu, [RH, Score=474, Expect=3e-157]} {Celegans: WBGene00004360, rib-1, Exostosin-1 homolog, [RH, Score=319, Expect=3e-102]} {Smed: dd_Smed_v6_11944_0_1, dd_Smed_v6_11944_0_1, [RH, Score=384, Expect=2e-126]} {RNA1509_20261} {RNA1310_9259.1} {RNA815_8522.1}
3.	MligTC455_52638	55	1.15	Mlig455_013830, Mlig455_059928	Neo: - Age: -		0.97	-	-	-	-	0.970	-	Mlig455_013830 {REF} {Length: 4150} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=32.8]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [Score=53.1, Expect=2e-09]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=57.8, Expect=4e-11]} {RNA1509_30354} {RNA1310_40374} {RNA815_53737} Mlig455_059928 {REF} {Length: 3973} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=32.8]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [Score=53.1, Expect=2e-09]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=57.8, Expect=4e-11]} {RNA1509_30354} {RNA1310_40374} {RNA815_53737}
4.	MligTC455_12651	877	18.27	Mlig455_061117	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.727		0.969	-	-	-	-	0.969	-	Mlig455_061117 {REF} {Length: 921} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=30.1]} {RNA1509_16147} {RNA1310_40437} {RNA815_22118}
5.	MligTC455_32612	55	1.15	Mlig455_015630	Neo: - Age: - Region-enriched R2: 5.626/0.02523	ARX	0.96	-	-	0.960	-	-	-	Mlig455_015630 {REF} {Length: 2012} {Pfam: Homeodomain [PF00046.31, score=83.5]} {Human: ENSG00000004848, ARX, aristaless related homeobox, [RH, Score=134, Expect=1e-34]} {Mouse: ENSMUSG00000035277, Arx, aristaless related homeobox, [RH, Score=133, Expect=1e-34]} {Dmel: FBgn0000061, al, aristaless, [RH, Score=130, Expect=3e-34]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [RH, Score=118, Expect=2e-30]} {Smed: dd_Smed_v6_63359_0_1, dd_Smed_v6_63359_0_1, [Score=119, Expect=3e-33]} {RNA1310_42333.1} {RNA815_48205}
6.	MligTC455_17946	64	1.34	Mlig455_036393, Mlig455_070861	Neo: - Age: - Region-enriched R4: 4.662/0.04379		0.954	-	-	0.954	-	-	-	Mlig455_036393 {REF} {Length: 799} {RNA1509_39915} {RNA1310_92317} {RNA815_19412} Mlig455_070861 {REF} {Length: 568} {RNA1509_39915} {RNA1310_92317} {RNA815_19412}
7.	MligTC455_40385	107	2.22	Mlig455_000019, Mlig455_016555, Mlig455_032870, Mlig455_045206	Neo: - Age: Down-Up-Up		0.954	-	-	-	-	0.954	-	Mlig455_000019 {REF} {Length: 671} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_016555 {REF} {Length: 692} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_032870 {REF} {Length: 762} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1} Mlig455_045206 {REF} {Length: 643} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23515} {RNA1310_9759} {RNA815_3094.1}
8.	MligTC455_31695	158	3.3	Mlig455_009775	Neo: - Age: Down-Up-Up Region-enriched R2: 3.086/0.01194		0.951	-	-	0.951	-	-	-	Mlig455_009775 {REF} {Length: 2186} {RNA1310_24838} {RNA815_18727}
9.	MligTC455_06721	89	1.85	Mlig455_017345, Mlig455_043539	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.604	EBF1, EBF3	0.95	-	-	0.950	-	-	-	Mlig455_017345 {REF} {Length: 1749} {Pfam: Transcription factor COE1 DNA-binding domain [PF16422.7, score=116.1]; Transcription factor COE1 helix-loop-helix domain [PF16423.7, score=102.1]; IPT/TIG domain [PF01833.26, score=49.8]; Spt20 family [PF12090.10, score=20.8]; Subtilase family [PF00082.24, score=20.7]} {Human: ENSG00000164330, EBF1, early B cell factor 1, [RH, Score=362, Expect=1e-122]} {Mouse: ENSMUSG00000057098, Ebf1, early B cell factor 1, [Score=364, Expect=3e-121]; ENSMUSG00000010476, Ebf3, early B cell factor 3, [Score=363, Expect=6e-121]; ENSMUSG00000022053, Ebf2, early B cell factor 2, [Score=352, Expect=9e-117]} {Dmel: FBgn0001319, kn, knot, [Score=371, Expect=2e-124]} {Celegans: WBGene00006743, unc-3, Transcription factor unc-3, [Score=288, Expect=6e-93]} {Smed: dd_Smed_v6_9893_0_1, dd_Smed_v6_9893_0_1, [Score=355, Expect=3e-118]} {RNA1310_57873} {RNA815_52006} Mlig455_043539 {REF} {Length: 2526} {Pfam: Transcription factor COE1 DNA-binding domain [PF16422.7, score=417.7]; Transcription factor COE1 helix-loop-helix domain [PF16423.7, score=101.4]; IPT/TIG domain [PF01833.26, score=49.0]; Spt20 family [PF12090.10, score=20.1]; Subtilase family [PF00082.24, score=20.0]} {Human: ENSG00000108001, EBF3, early B cell factor 3, [RH, Score=619, Expect=0.0]; ENSG00000164330, EBF1, early B cell factor 1, [RH, Score=619, Expect=0.0]; ENSG00000221818, EBF2, early B cell factor 2, [RH, Score=595, Expect=0.0]} {Mouse: ENSMUSG00000057098, Ebf1, early B cell factor 1, [RH, Score=621, Expect=0.0]; ENSMUSG00000010476, Ebf3, early B cell factor 3, [RH, Score=620, Expect=0.0]; ENSMUSG00000022053, Ebf2, early B cell factor 2, [RH, Score=595, Expect=0.0]; ENSMUSG00000053552, Ebf4, early B cell factor 4, [RH, Score=593, Expect=0.0]} {Dmel: FBgn0001319, kn, knot, [RH, Score=617, Expect=0.0]} {Celegans: WBGene00006743, unc-3, Transcription factor unc-3, [RH, Score=513, Expect=1e-178]} {Smed: dd_Smed_v6_9893_0_1, dd_Smed_v6_9893_0_1, [RH, Score=588, Expect=0.0]} {RNA1310_57873} {RNA815_35851}

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