Data search


search
Exact
Search

Results for MligTC455_24741

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24741 2585 53.86 Mlig455_036277

Neo: -

Age: logFC(26M/2M)=0.444

CDO1 Mlig455_036277 {REF} {Length: 1444} {Pfam: Cysteine dioxygenase type I [PF05995.14, score=224.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=175.4]; Protein kinase domain [PF00069.27, score=72.0]} {Human: ENSG00000129596, CDO1, cysteine dioxygenase type 1, [RH, Score=234, Expect=5e-76]} {Mouse: ENSMUSG00000033022, Cdo1, cysteine dioxygenase 1, cytosolic, [RH, Score=231, Expect=9e-75]} {Dmel: FBgn0034364, CG5493, [RH, Score=207, Expect=6e-65]} {Celegans: WBGene00018986, cdo-1, Cysteine dioxygenase 1, [RH, Score=208, Expect=5e-66]} {Smed: dd_Smed_v6_11561_0_1, dd_Smed_v6_11561_0_1, [Score=173, Expect=8e-49]} {RNA1509_3112} {RNA1310_25521} {RNA815_10217}

Cumulative graph for MligTC455_24741

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.485 5.927 0.54368 1.00000
RegionR2 -0.171 5.927 0.75304 1.00000
RegionR3 -0.449 5.927 0.35591 0.89106
RegionR4 0.218 5.927 0.68358 0.97663
RegionR5 -0.555 5.927 0.24547 0.55892
RegionR6 0.069 5.927 0.88371 1.00000
RegionR7 0.9 5.927 0.04994 0.43016
RegionR8 0.474 5.927 0.35359 0.98726

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.948 5.927 0.02311 0.59165
RegenerationR2 -0.674 5.927 0.25803 0.70440
RegenerationR3 0.26 5.927 0.66878 0.93630
RegenerationR4 -0.404 5.927 0.51976 0.87894
RegenerationR5 0.787 5.927 0.18670 0.61744
RegenerationR6 -0.138 5.927 0.81871 0.98619
RegenerationBL -1.057 5.927 0.05840 0.28028
RegenerationTP -0.438 5.927 0.44675 0.86537


Genes with expression patterns similar to MligTC455_24741

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24741 2585 53.86 Mlig455_036277

Neo: -

Age: logFC(26M/2M)=0.444

CDO1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_036277 {REF} {Length: 1444} {Pfam: Cysteine dioxygenase type I [PF05995.14, score=224.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=175.4]; Protein kinase domain [PF00069.27, score=72.0]} {Human: ENSG00000129596, CDO1, cysteine dioxygenase type 1, [RH, Score=234, Expect=5e-76]} {Mouse: ENSMUSG00000033022, Cdo1, cysteine dioxygenase 1, cytosolic, [RH, Score=231, Expect=9e-75]} {Dmel: FBgn0034364, CG5493, [RH, Score=207, Expect=6e-65]} {Celegans: WBGene00018986, cdo-1, Cysteine dioxygenase 1, [RH, Score=208, Expect=5e-66]} {Smed: dd_Smed_v6_11561_0_1, dd_Smed_v6_11561_0_1, [Score=173, Expect=8e-49]} {RNA1509_3112} {RNA1310_25521} {RNA815_10217}
2. MligTC455_48167 1275 26.56 Mlig455_044657

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.458

1.718 - - - 0.963 0.755 - Mlig455_044657 {REF} {Length: 826} {TRANSSPLICED} {RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520} {RNA1310_35474, RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520} {RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520, RNA815_20690.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA