Data search
Results for MligTC455_48167
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_48167 | 1275 | 26.56 | Mlig455_044657 | Neo: - |
Mlig455_044657 {REF} {Length: 826} {TRANSSPLICED} {RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520} {RNA1310_35474, RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520} {RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520, RNA815_20690.1} |
Cumulative graph for MligTC455_48167
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.256 | 4.936 | 0.10460 | 0.67888 | |
| RegionR2 | 0.196 | 4.936 | 0.57369 | 0.93207 | |
| RegionR3 | -0.161 | 4.936 | 0.58550 | 1.00000 | |
| RegionR4 | -0.461 | 4.936 | 0.15559 | 0.40939 | |
| RegionR5 | 0.791 | 4.936 | 0.00141 | 0.01336 | |
| RegionR6 | 0.954 | 4.936 | 0.00039 | 0.02049 | |
| RegionR7 | 0.404 | 4.936 | 0.23137 | 0.85492 | |
| RegionR8 | -0.467 | 4.936 | 0.31146 | 0.94401 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.513 | 4.936 | 0.31256 | 1.00000 | |
| RegenerationR2 | -0.572 | 4.936 | 0.06224 | 0.40926 | |
| RegenerationR3 | 0.095 | 4.936 | 0.77594 | 0.97380 | |
| RegenerationR4 | -0.254 | 4.936 | 0.44545 | 0.83970 | |
| RegenerationR5 | -0.163 | 4.936 | 0.57032 | 0.89587 | |
| RegenerationR6 | -0.505 | 4.936 | 0.10510 | 0.40179 | |
| RegenerationBL | -0.78 | 4.936 | 0.05327 | 0.26675 | |
| RegenerationTP | 0.497 | 4.936 | 0.20270 | 0.64416 |
Genes with expression patterns similar to MligTC455_48167
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_48167 | 1275 | 26.56 | Mlig455_044657 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044657 {REF} {Length: 826} {TRANSSPLICED} {RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520} {RNA1310_35474, RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520} {RNA1509_27845, RNA1509_40843, RNA1509_44924, RNA1509_45520, RNA815_20690.1} | |
| 2. | MligTC455_24741 | 2585 | 53.86 | Mlig455_036277 | Neo: - Age: logFC(26M/2M)=0.444 |
CDO1 | 1.718 | - | - | - | 0.963 | 0.755 | - | Mlig455_036277 {REF} {Length: 1444} {Pfam: Cysteine dioxygenase type I [PF05995.14, score=224.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=175.4]; Protein kinase domain [PF00069.27, score=72.0]} {Human: ENSG00000129596, CDO1, cysteine dioxygenase type 1, [RH, Score=234, Expect=5e-76]} {Mouse: ENSMUSG00000033022, Cdo1, cysteine dioxygenase 1, cytosolic, [RH, Score=231, Expect=9e-75]} {Dmel: FBgn0034364, CG5493, [RH, Score=207, Expect=6e-65]} {Celegans: WBGene00018986, cdo-1, Cysteine dioxygenase 1, [RH, Score=208, Expect=5e-66]} {Smed: dd_Smed_v6_11561_0_1, dd_Smed_v6_11561_0_1, [Score=173, Expect=8e-49]} {RNA1509_3112} {RNA1310_25521} {RNA815_10217} |
| 3. | MligTC455_25032 | 928 | 19.34 | Mlig455_061298, Mlig455_061299, Mlig455_062656 | Neo: Irradiation Age: - Region-enriched R5: 1.890/0.00071 |
RFC3 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_061298 {REF} {Length: 1322} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA ATPase domain [PF13191.8, score=25.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=1e-175]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=497, Expect=1e-177]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=480, Expect=6e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=7e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=444, Expect=3e-157]} {RNA1509_12650} {RNA1310_19461.1} {RNA815_9346} Mlig455_061299 {REF} {Length: 923} {RNA1509_12650} {RNA1310_19461.1} {RNA815_61018} Mlig455_062656 {REF} {Length: 2879} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; AAA ATPase domain [PF13191.8, score=26.1]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=7e-176]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=499, Expect=4e-178]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=481, Expect=3e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=5e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=447, Expect=4e-158]} {RNA1509_12650} {RNA1310_19461.1, RNA1509_12650} {RNA1509_12650, RNA815_9346} |
| 4. | MligTC455_46280 | 4615 | 96.14 | Mlig455_070151 | Neo: - |
CDIP1 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_070151 {REF} {Length: 1177} {TRANSSPLICED} {Pfam: LITAF-like zinc ribbon domain [PF10601.11, score=78.1]} {Human: ENSG00000274336, CDIP1, cell death inducing p53 target 1, [RH, Score=85.5, Expect=6e-21]; ENSG00000089486, CDIP1, cell death inducing p53 target 1, [RH, Score=85.5, Expect=6e-21]} {Mouse: ENSMUSG00000022500, Litaf, LPS-induced TN factor, [Score=85.1, Expect=5e-21]} {Dmel: FBgn0052280, CG32280, [RH, Score=73.9, Expect=3e-17]} {Celegans: WBGene00009484, F36G3.3, [Score=67.8, Expect=8e-15]} {Smed: dd_Smed_v6_353_0_1, dd_Smed_v6_353_0_1, [RH, Score=92.4, Expect=1e-24]} {RNA1509_2186} {RNA1310_32688, RNA1509_2186} {RNA1509_2186, RNA815_14393.2} |
| 5. | MligTC455_45318 | 514 | 10.71 | Mlig455_019179 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_019179 {REF} {Length: 2723} {TRANSSPLICED} {Pfam: Resistance to inhibitors of cholinesterase homologue 3 [PF15361.8, score=92.9]} {Dmel: FBgn0050296, RIC-3, RIC3 acetylcholine receptor chaperone, [Score=66.6, Expect=4e-12]} {Celegans: WBGene00004363, ric-3, Resistance to inhibitors of cholinesterase protein 3, [RH, Score=81.3, Expect=2e-17]} {Smed: dd_Smed_v6_5523_0_1, dd_Smed_v6_5523_0_1, [RH, Score=161, Expect=8e-48]} {RNA1509_57521} {RNA1310_35411.1} {RNA815_20913} | |
| 6. | MligTC455_10541 | 568 | 11.84 | Mlig455_046053 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.521/0.00803 |
RFFL | 0.956 | - | - | - | - | - | 0.956 | Mlig455_046053 {REF} {Length: 3172} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=41.8]} {Human: ENSG00000092871, RFFL, ring finger and FYVE like domain containing E3 ubiquitin protein ligase, [RH, Score=122, Expect=2e-32]; ENSG00000267618, RAD51L3-RFFL, RAD51L3-RFFL readthrough, [RH, Score=120, Expect=4e-32]; ENSG00000170633, RNF34, ring finger protein 34, [RH, Score=120, Expect=6e-31]} {Mouse: ENSMUSG00000029474, Rnf34, ring finger protein 34, [RH, Score=126, Expect=1e-33]; ENSMUSG00000020696, Rffl, ring finger and FYVE like domain containing protein, [RH, Score=123, Expect=1e-32]} {Dmel: FBgn0033783, CG17019, [RH, Score=123, Expect=2e-31]} {Celegans: WBGene00017342, F10D7.5, [RH, Score=62.0, Expect=9e-11]} {Smed: dd_Smed_v6_6206_0_1, dd_Smed_v6_6206_0_1, [RH, Score=144, Expect=1e-40]} {RNA1509_15310, RNA1509_54859} {RNA1310_32374, RNA1509_15310, RNA1509_54859} {RNA1509_15310, RNA1509_54859, RNA815_14804} |
| 7. | MligTC455_16659 | 262 | 5.45 | Mlig455_056303 | Neo: - Age: - |
CENPA | 0.954 | - | - | - | - | - | 0.954 | Mlig455_056303 {REF} {Length: 2267} {TRANSSPLICED} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=81.0]; Histone-like transcription factor (CBF/NF-Y) and archaeal histone [PF00808.25, score=21.1]} {Human: ENSG00000115163, CENPA, centromere protein A, [Score=80.5, Expect=3e-18]} {Mouse: ENSMUSG00000029177, Cenpa, centromere protein A, [Score=70.9, Expect=8e-15]} {Dmel: FBgn0040477, cid, centromere identifier, [RH, Score=76.3, Expect=4e-16]} {Celegans: WBGene00001946, his-72, Histone H3.3 type 2, [Score=64.3, Expect=1e-12]} {Smed: dd_Smed_v6_8630_0_1, dd_Smed_v6_8630_0_1, [Score=63.5, Expect=1e-12]} {RNA1509_27366} {RNA1310_29469} {RNA815_14172} |
| 8. | MligTC455_16947 | 1136 | 23.67 | Mlig455_001481 | Neo: Irradiation Age: logFC(26M/2M)=0.345 Region-enriched R5: 1.131/0.00263 |
UBE2C | 0.952 | - | - | - | - | - | 0.952 | Mlig455_001481 {REF} {Length: 2661} {TRANSSPLICED} {tRNA: Gly(CCC),pseudo, score=24.5} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=106.1]} {Human: ENSG00000175063, UBE2C, ubiquitin conjugating enzyme E2 C, [Score=132, Expect=9e-40]} {Mouse: ENSMUSG00000001403, Ube2c, ubiquitin-conjugating enzyme E2C, [Score=131, Expect=7e-40]} {Dmel: FBgn0264848, vih, vihar, [Score=125, Expect=9e-38]} {Celegans: WBGene00002344, let-70, Ubiquitin-conjugating enzyme E2 2, [Score=93.6, Expect=1e-25]} {Smed: dd_Smed_v6_3846_0_1, dd_Smed_v6_3846_0_1, [Score=104, Expect=5e-30]} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1310_35900.2, RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558} {RNA1509_14380, RNA1509_20963, RNA1509_30332, RNA1509_50558, RNA815_23169.2} |
| 9. | MligTC455_41317 | 1061 | 22.1 | Mlig455_066729, Mlig455_066743 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.287/0.00006 |
PIAS3 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_066729 {REF} {Length: 2141} {Pfam: PINIT domain [PF14324.8, score=83.5]; MIZ/SP-RING zinc finger [PF02891.22, score=76.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=29.6]} {Human: ENSG00000131788, PIAS3, protein inhibitor of activated STAT 3, [RH, Score=241, Expect=2e-72]; ENSG00000033800, PIAS1, protein inhibitor of activated STAT 1, [RH, Score=237, Expect=2e-70]; ENSG00000078043, PIAS2, protein inhibitor of activated STAT 2, [RH, Score=229, Expect=2e-68]} {Mouse: ENSMUSG00000028101, Pias3, protein inhibitor of activated STAT 3, [RH, Score=238, Expect=1e-71]; ENSMUSG00000032405, Pias1, protein inhibitor of activated STAT 1, [RH, Score=238, Expect=5e-71]; ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [RH, Score=229, Expect=2e-68]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [RH, Score=267, Expect=2e-82]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [RH, Score=161, Expect=6e-43]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [RH, Score=122, Expect=2e-29]} {RNA1509_29880} {RNA1310_13374.2, RNA1509_29880} {RNA1509_29880, RNA815_10961} Mlig455_066743 {REF} {Length: 2045} {TRANSSPLICED} {Pfam: PINIT domain [PF14324.8, score=83.5]; MIZ/SP-RING zinc finger [PF02891.22, score=76.1]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=28.4]} {Human: ENSG00000131788, PIAS3, protein inhibitor of activated STAT 3, [RH, Score=242, Expect=8e-73]; ENSG00000033800, PIAS1, protein inhibitor of activated STAT 1, [RH, Score=237, Expect=2e-70]} {Mouse: ENSMUSG00000032405, Pias1, protein inhibitor of activated STAT 1, [RH, Score=239, Expect=2e-71]; ENSMUSG00000028101, Pias3, protein inhibitor of activated STAT 3, [RH, Score=239, Expect=5e-72]; ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [RH, Score=229, Expect=3e-68]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [RH, Score=268, Expect=1e-82]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [RH, Score=162, Expect=1e-43]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [RH, Score=122, Expect=1e-29]} {RNA1509_13935} {RNA1310_13374.1} {RNA815_10961} |
| 10. | MligTC455_44887 | 259 | 5.39 | Mlig455_036907 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.542/0.00111 |
0.95 | - | - | - | - | - | 0.950 | Mlig455_036907 {REF} {Length: 3437} {TRANSSPLICED} {RNA1509_19251, RNA1509_43115, RNA1509_55744} {RNA1310_5979.2, RNA1509_43115, RNA1509_55744} {RNA1509_43115, RNA1509_55744, RNA815_3904} |