TomoSeq data search

Data search

Results for MligTC455_24964

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_24964

230

4.78

Mlig455_004574

Neo: -

Age: -

Region-enriched R5: 1.763/0.03386

CORO2A

Mlig455_004574 {REF} {Length: 3331} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=79.3]; WD domain, G-beta repeat [PF00400.34, score=50.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.5]; Type of WD40 repeat [PF16300.7, score=37.9]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=28.2]} {Human: ENSG00000106789, CORO2A, coronin 2A, [Score=341, Expect=4e-109]; ENSG00000103647, CORO2B, coronin 2B, [Score=327, Expect=2e-104]} {Mouse: ENSMUSG00000028337, Coro2a, coronin, actin binding protein 2A, [Score=333, Expect=2e-106]; ENSMUSG00000041729, Coro2b, coronin, actin binding protein, 2B, [Score=328, Expect=7e-105]; ENSMUSG00000030707, Coro1a, coronin, actin binding protein 1A, [Score=320, Expect=6e-102]; ENSMUSG00000020836, Coro6, coronin 6, [Score=320, Expect=8e-102]} {Dmel: FBgn0265935, coro, [Score=280, Expect=4e-86]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [Score=239, Expect=5e-71]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [Score=294, Expect=1e-91]} {RNA1509_10452} {RNA1310_3816, RNA1509_10452} {RNA1509_10452, RNA815_13122}

Cumulative graph for MligTC455_24964

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.115	2.808	0.13238	0.73154
RegionR2	1.482	2.808	0.10597	0.40132
RegionR3	0.775	2.808	0.39296	0.92328
RegionR4	0.047	2.808	0.83771	1.00000
RegionR5	1.763	2.808	0.00485	0.03386
RegionR6	1.117	2.808	0.18706	0.75337
RegionR7	0.229	2.808	0.77608	1.00000
RegionR8	0.702	2.808	0.57250	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.886	2.808	0.23508	0.96499
RegenerationR2	-0.602	2.808	0.22033	0.66773
RegenerationR3	0.216	2.808	0.69915	0.94715
RegenerationR4	0.747	2.808	0.20198	0.64824
RegenerationR5	-0.136	2.808	0.76764	0.97822
RegenerationR6	0.06	2.808	0.91675	1.00000
RegenerationBL	0.881	2.808	0.21937	0.56632
RegenerationTP	-0.297	2.808	0.76172	1.00000

Genes with expression patterns similar to MligTC455_24964

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_24964	230	4.78	Mlig455_004574	Neo: - Age: - Region-enriched R5: 1.763/0.03386	CORO2A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004574 {REF} {Length: 3331} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=79.3]; WD domain, G-beta repeat [PF00400.34, score=50.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.5]; Type of WD40 repeat [PF16300.7, score=37.9]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=28.2]} {Human: ENSG00000106789, CORO2A, coronin 2A, [Score=341, Expect=4e-109]; ENSG00000103647, CORO2B, coronin 2B, [Score=327, Expect=2e-104]} {Mouse: ENSMUSG00000028337, Coro2a, coronin, actin binding protein 2A, [Score=333, Expect=2e-106]; ENSMUSG00000041729, Coro2b, coronin, actin binding protein, 2B, [Score=328, Expect=7e-105]; ENSMUSG00000030707, Coro1a, coronin, actin binding protein 1A, [Score=320, Expect=6e-102]; ENSMUSG00000020836, Coro6, coronin 6, [Score=320, Expect=8e-102]} {Dmel: FBgn0265935, coro, [Score=280, Expect=4e-86]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [Score=239, Expect=5e-71]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [Score=294, Expect=1e-91]} {RNA1509_10452} {RNA1310_3816, RNA1509_10452} {RNA1509_10452, RNA815_13122}
2.	MligTC455_22283	538	11.22	Mlig455_067699	Neo: Irradiation Age: Up-Down-Down Region-enriched R5: 1.149/0.04432		2.486	-	-	-	0.960	0.745	0.781	Mlig455_067699 {REF} {Length: 3961} {TRANSSPLICED} {Smed: dd_Smed_v6_4268_0_1, dd_Smed_v6_4268_0_1, [RH, Score=75.5, Expect=1e-15]} {RNA1509_21983} {RNA1310_15855} {RNA815_31364}
3.	MligTC455_51226	355	7.4	Mlig455_019150	Neo: - Age: logFC(26M/2M)=-0.268	MFSD6	1.835	-	-	-	0.958	-	0.877	Mlig455_019150 {REF} {Length: 2771} {TRANSSPLICED} {Pfam: MFS_1 like family [PF12832.9, score=201.2]; Major Facilitator Superfamily [PF07690.18, score=71.9]; Nucleoside H+ symporter [PF03825.18, score=42.7]; LacY proton/sugar symporter [PF01306.21, score=33.7]} {Human: ENSG00000151690, MFSD6, major facilitator superfamily domain containing 6, [Score=48.5, Expect=4e-06]} {Dmel: FBgn0036191, Sugb, Sugar baby, [RH, Score=139, Expect=9e-35]} {Smed: dd_Smed_v6_14524_0_1, dd_Smed_v6_14524_0_1, [RH, Score=154, Expect=2e-40]} {RNA1509_11813, RNA1509_32646, RNA1509_49180} {RNA1310_11864, RNA1509_11813, RNA1509_32646, RNA1509_49180} {RNA1509_11813, RNA1509_32646, RNA1509_49180, RNA815_4659}
4.	MligTC455_42134	343	7.15	Mlig455_059908	Neo: - Age: -	ZNF207	1.684	-	-	-	0.957	-	0.727	Mlig455_059908 {REF} {Length: 2414} {Human: ENSG00000010244, ZNF207, zinc finger protein 207, [Score=108, Expect=8e-27]} {Mouse: ENSMUSG00000017421, Zfp207, zinc finger protein 207, [Score=107, Expect=8e-27]} {Dmel: FBgn0032600, BuGZ, Bub3 interacting GLEBS and Zinc finger domain protein, [Score=102, Expect=1e-25]} {Celegans: WBGene00007105, B0035.1, [Score=99.0, Expect=1e-24]} {Smed: dd_Smed_v6_4303_0_1, dd_Smed_v6_4303_0_1, [Score=100, Expect=4e-25]} {RNA1509_21184, RNA1509_35664, RNA1509_46140, RNA1509_46646, RNA1509_48698} {RNA1310_10471, RNA1509_21184, RNA1509_35664, RNA1509_46646, RNA1509_48698} {RNA1509_21184, RNA1509_35664, RNA1509_46646, RNA1509_48698, RNA815_31342}
5.	MligTC455_39361	518	10.8	Mlig455_041392, Mlig455_069358	Neo: - Age: Down-Down-Down Region-enriched R5: 3.455/0.00000 Region-enriched R4: 2.612/0.01252		1.661	-	0.707	-	-	0.954	-	Mlig455_041392 {REF} {Length: 1366} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941, RNA1509_21193} {RNA1509_21193, RNA815_22823} Mlig455_069358 {REF} {Length: 1362} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941} {RNA815_22823}
6.	MligTC455_42773	200	4.16	Mlig455_029337	Neo: - Age: -		0.978	-	-	-	0.978	-	-	Mlig455_029337 {REF} {Length: 1557} {TRANSSPLICED} {RNA1509_52444} {RNA1310_41405.1} {RNA815_43751}
7.	MligTC455_39153	43	0.9	Mlig455_041661	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_041661 {REF} {Length: 1670} {RNA1509_56316} {RNA1310_3607.1, RNA1509_56316} {RNA1509_56316, RNA815_31436}
8.	MligTC455_42133	321	6.69	Mlig455_022186	Neo: - Age: -	ZNF207	0.959	-	-	-	0.959	-	-	Mlig455_022186 {REF} {Length: 2559} {TRANSSPLICED} {Human: ENSG00000010244, ZNF207, zinc finger protein 207, [RH, Score=182, Expect=6e-53]} {Mouse: ENSMUSG00000017421, Zfp207, zinc finger protein 207, [RH, Score=182, Expect=6e-53]} {Dmel: FBgn0032600, BuGZ, Bub3 interacting GLEBS and Zinc finger domain protein, [RH, Score=172, Expect=1e-50]} {Celegans: WBGene00007105, B0035.1, [RH, Score=159, Expect=3e-46]} {Smed: dd_Smed_v6_4303_0_1, dd_Smed_v6_4303_0_1, [RH, Score=191, Expect=1e-58]} {RNA1509_46140, RNA1509_53527} {RNA1310_10471, RNA1509_46140, RNA1509_53527} {RNA1509_46140, RNA1509_53527, RNA815_7461}
9.	MligTC455_42874	419	8.73	Mlig455_042829	Neo: - Age: Up-Down-Up Region-enriched R4: 1.708/0.01972	DBT	0.958	-	-	-	0.958	-	-	Mlig455_042829 {REF} {Length: 2131} {Pfam: 2-oxoacid dehydrogenases acyltransferase (catalytic domain) [PF00198.25, score=133.2]; e3 binding domain [PF02817.19, score=28.4]} {Human: ENSG00000137992, DBT, dihydrolipoamide branched chain transacylase E2, [Score=157, Expect=4e-43]} {Mouse: ENSMUSG00000000340, Dbt, dihydrolipoamide branched chain transacylase E2, [Score=146, Expect=4e-39]} {Dmel: FBgn0030612, CG5599, [Score=131, Expect=1e-33]} {Celegans: WBGene00014054, dbt-1, Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial, [Score=154, Expect=3e-42]} {Smed: dd_Smed_v6_5703_0_1, dd_Smed_v6_5703_0_1, [Score=156, Expect=3e-43]} {RNA1509_12498} {RNA1310_6309} {RNA815_18112}
10.	MligTC455_42876	841	17.52	Mlig455_045847, Mlig455_045863	Neo: - Age: - Region-enriched R4: 1.743/0.00817	DBT	0.957	-	-	-	0.957	-	-	Mlig455_045847 {REF} {Length: 3348} {Pfam: 2-oxoacid dehydrogenases acyltransferase (catalytic domain) [PF00198.25, score=226.8]; e3 binding domain [PF02817.19, score=56.5]} {Human: ENSG00000137992, DBT, dihydrolipoamide branched chain transacylase E2, [Score=337, Expect=3e-111]} {Mouse: ENSMUSG00000000340, Dbt, dihydrolipoamide branched chain transacylase E2, [Score=344, Expect=5e-114]} {Dmel: FBgn0030612, CG5599, [Score=311, Expect=2e-101]} {Celegans: WBGene00014054, dbt-1, Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial, [Score=325, Expect=2e-107]} {Smed: dd_Smed_v6_5703_0_1, dd_Smed_v6_5703_0_1, [Score=320, Expect=3e-105]} {RNA1509_18097} {RNA1310_6309} {RNA815_31700} Mlig455_045863 {REF} {Length: 3088} {Pfam: 2-oxoacid dehydrogenases acyltransferase (catalytic domain) [PF00198.25, score=263.1]; Biotin-requiring enzyme [PF00364.24, score=71.4]; e3 binding domain [PF02817.19, score=56.3]} {Human: ENSG00000137992, DBT, dihydrolipoamide branched chain transacylase E2, [RH, Score=432, Expect=1e-147]} {Mouse: ENSMUSG00000000340, Dbt, dihydrolipoamide branched chain transacylase E2, [RH, Score=439, Expect=2e-150]} {Dmel: FBgn0030612, CG5599, [RH, Score=402, Expect=2e-136]} {Celegans: WBGene00014054, dbt-1, Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial, [RH, Score=410, Expect=3e-140]} {Smed: dd_Smed_v6_5703_0_1, dd_Smed_v6_5703_0_1, [RH, Score=399, Expect=2e-135]} {RNA1509_12498} {RNA1310_6309} {RNA815_14245}
11.	MligTC455_33501	123	2.57	Mlig455_003879, Mlig455_052212	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_003879 {REF} {Length: 220} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_49031} {RNA1310_97783} {RNA815_54937} Mlig455_052212 {REF} {Length: 1790} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_49031} {RNA1310_97783} {RNA815_54937}
12.	MligTC455_35401	391	8.14	Mlig455_009584	Neo: - Age: -	DIRC2	0.955	-	-	-	-	-	0.955	Mlig455_009584 {REF} {Length: 3235} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=46.8]} {Human: ENSG00000138463, DIRC2, disrupted in renal carcinoma 2, [Score=161, Expect=1e-43]} {Mouse: ENSMUSG00000022848, Dirc2, disrupted in renal carcinoma 2 (human), [Score=166, Expect=3e-45]} {Dmel: FBgn0033196, CG1358, [Score=87.4, Expect=4e-18]} {Celegans: WBGene00016586, C42C1.8, [Score=61.6, Expect=6e-10]} {Smed: dd_Smed_v6_4596_0_1, dd_Smed_v6_4596_0_1, [RH, Score=128, Expect=5e-32]} {RNA1509_12696} {RNA1310_17284} {RNA815_7063}
13.	MligTC455_42875	420	8.76	Mlig455_045831	Neo: - Age: - Region-enriched R4: 1.754/0.01517	DBT	0.953	-	-	-	0.953	-	-	Mlig455_045831 {REF} {Length: 2603} {Pfam: 2-oxoacid dehydrogenases acyltransferase (catalytic domain) [PF00198.25, score=263.1]; Biotin-requiring enzyme [PF00364.24, score=70.2]; e3 binding domain [PF02817.19, score=57.2]} {Human: ENSG00000137992, DBT, dihydrolipoamide branched chain transacylase E2, [RH, Score=433, Expect=5e-148]} {Mouse: ENSMUSG00000000340, Dbt, dihydrolipoamide branched chain transacylase E2, [RH, Score=439, Expect=1e-150]} {Dmel: FBgn0030612, CG5599, [RH, Score=402, Expect=1e-136]} {Celegans: WBGene00014054, dbt-1, Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial, [RH, Score=415, Expect=5e-142]} {Smed: dd_Smed_v6_5703_0_1, dd_Smed_v6_5703_0_1, [RH, Score=400, Expect=5e-136]} {RNA1509_12498} {RNA1310_6309, RNA1509_12498} {RNA1509_12498, RNA815_14245}

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