TomoSeq data search

Data search

Results for MligTC455_39361

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_39361	518	10.80	Mlig455_041392, Mlig455_069358	Neo: - Age: Down-Down-Down Region-enriched R5: 3.455/0.00000 Region-enriched R4: 2.612/0.01252		Mlig455_041392 {REF} {Length: 1366} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941, RNA1509_21193} {RNA1509_21193, RNA815_22823} Mlig455_069358 {REF} {Length: 1362} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941} {RNA815_22823}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_39361

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.036	3.851	0.13467	0.73670
RegionR2	0.845	3.851	0.38308	0.77801
RegionR3	1.25	3.851	0.13077	0.62070
RegionR4	2.612	3.851	0.00127	0.01252
RegionR5	3.455	3.851	0.00000	0.00000
RegionR6	1.614	3.851	0.03686	0.35865
RegionR7	-2.636	3.851	1.00000	1.00000
RegionR8	-1.104	3.851	0.98994	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	7.264	3.851	0.04336	0.67660
RegenerationR2	-0.39	3.851	0.43783	0.83895
RegenerationR3	0.539	3.851	0.31509	0.74509
RegenerationR4	-0.076	3.851	0.89056	1.00000
RegenerationR5	-0.166	3.851	0.71063	0.95556
RegenerationR6	0.351	3.851	0.50757	0.81164
RegenerationBL	1.756	3.851	0.03359	0.20551
RegenerationTP	1.931	3.851	0.08480	0.46112

Genes with expression patterns similar to MligTC455_39361

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_39361	518	10.8	Mlig455_041392, Mlig455_069358	Neo: - Age: Down-Down-Down Region-enriched R5: 3.455/0.00000 Region-enriched R4: 2.612/0.01252		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_041392 {REF} {Length: 1366} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941, RNA1509_21193} {RNA1509_21193, RNA815_22823} Mlig455_069358 {REF} {Length: 1362} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941} {RNA815_22823}
2.	MligTC455_41572	746	15.54	Mlig455_030760	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.596/0.00078		1.668	0.702	-	-	-	0.966	-	Mlig455_030760 {REF} {Length: 2018} {TRANSSPLICED} {Pfam: DNA polymerase subunit Cdc27 [PF09507.12, score=38.5]} {RNA1509_21656, RNA1509_38904, RNA1509_41902} {RNA1310_13885, RNA1509_21656, RNA1509_38904, RNA1509_41902} {RNA1509_21656, RNA1509_38904, RNA1509_41902, RNA815_5435.1}
3.	MligTC455_24964	230	4.78	Mlig455_004574	Neo: - Age: - Region-enriched R5: 1.763/0.03386	CORO2A	1.661	-	0.707	-	-	0.954	-	Mlig455_004574 {REF} {Length: 3331} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=79.3]; WD domain, G-beta repeat [PF00400.34, score=50.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.5]; Type of WD40 repeat [PF16300.7, score=37.9]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=28.2]} {Human: ENSG00000106789, CORO2A, coronin 2A, [Score=341, Expect=4e-109]; ENSG00000103647, CORO2B, coronin 2B, [Score=327, Expect=2e-104]} {Mouse: ENSMUSG00000028337, Coro2a, coronin, actin binding protein 2A, [Score=333, Expect=2e-106]; ENSMUSG00000041729, Coro2b, coronin, actin binding protein, 2B, [Score=328, Expect=7e-105]; ENSMUSG00000030707, Coro1a, coronin, actin binding protein 1A, [Score=320, Expect=6e-102]; ENSMUSG00000020836, Coro6, coronin 6, [Score=320, Expect=8e-102]} {Dmel: FBgn0265935, coro, [Score=280, Expect=4e-86]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [Score=239, Expect=5e-71]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [Score=294, Expect=1e-91]} {RNA1509_10452} {RNA1310_3816, RNA1509_10452} {RNA1509_10452, RNA815_13122}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_39361

518

10.8

Mlig455_041392, Mlig455_069358

Neo: -

Age: Down-Down-Down

Region-enriched R5: 3.455/0.00000
Region-enriched R4: 2.612/0.01252

1.000

Mlig455_041392 {REF} {Length: 1366} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941, RNA1509_21193} {RNA1509_21193, RNA815_22823}

Mlig455_069358 {REF} {Length: 1362} {TRANSSPLICED} {RNA1509_21193} {RNA1310_18941} {RNA815_22823}

MligTC455_41572

746

15.54

Mlig455_030760

Neo: Int S/G2/M

Age: Down-Up-Down

Region-enriched R5: 1.596/0.00078

1.668

0.702

0.966

Mlig455_030760 {REF} {Length: 2018} {TRANSSPLICED} {Pfam: DNA polymerase subunit Cdc27 [PF09507.12, score=38.5]} {RNA1509_21656, RNA1509_38904, RNA1509_41902} {RNA1310_13885, RNA1509_21656, RNA1509_38904, RNA1509_41902} {RNA1509_21656, RNA1509_38904, RNA1509_41902, RNA815_5435.1}

MligTC455_24964

230

4.78

Mlig455_004574

Neo: -

Age: -

Region-enriched R5: 1.763/0.03386

CORO2A

1.661

0.707

0.954

Mlig455_004574 {REF} {Length: 3331} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1899) [PF08953.13, score=79.3]; WD domain, G-beta repeat [PF00400.34, score=50.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=44.5]; Type of WD40 repeat [PF16300.7, score=37.9]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=28.2]} {Human: ENSG00000106789, CORO2A, coronin 2A, [Score=341, Expect=4e-109]; ENSG00000103647, CORO2B, coronin 2B, [Score=327, Expect=2e-104]} {Mouse: ENSMUSG00000028337, Coro2a, coronin, actin binding protein 2A, [Score=333, Expect=2e-106]; ENSMUSG00000041729, Coro2b, coronin, actin binding protein, 2B, [Score=328, Expect=7e-105]; ENSMUSG00000030707, Coro1a, coronin, actin binding protein 1A, [Score=320, Expect=6e-102]; ENSMUSG00000020836, Coro6, coronin 6, [Score=320, Expect=8e-102]} {Dmel: FBgn0265935, coro, [Score=280, Expect=4e-86]} {Celegans: WBGene00000768, cor-1, Coronin-like protein cor-1, [Score=239, Expect=5e-71]} {Smed: dd_Smed_v6_448_0_1, dd_Smed_v6_448_0_1, [Score=294, Expect=1e-91]} {RNA1509_10452} {RNA1310_3816, RNA1509_10452} {RNA1509_10452, RNA815_13122}