TomoSeq data search

Data search

Results for MligTC455_25006

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25006	9	0.19	Mlig455_058387	Neo: - Age: -	CYP3A5	Mlig455_058387 {REF} {Length: 3128} {Pfam: Cytochrome P450 [PF00067.24, score=320.3]} {Human: ENSG00000106258, CYP3A5, cytochrome P450 family 3 subfamily A member 5, [Score=271, Expect=7e-85]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=269, Expect=8e-84]; ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=261, Expect=2e-80]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=261, Expect=5e-81]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=267, Expect=3e-83]; ENSMUSG00000038656, Cyp3a16, cytochrome P450, family 3, subfamily a, polypeptide 16, [Score=261, Expect=7e-81]; ENSMUSG00000056035, Cyp3a11, cytochrome P450, family 3, subfamily a, polypeptide 11, [Score=260, Expect=1e-80]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=259, Expect=4e-80]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=259, Expect=4e-80]} {Dmel: FBgn0033775, Cyp9h1, [RH, Score=226, Expect=1e-67]} {Celegans: WBGene00011674, cyp-13A8, Putative cytochrome P450 CYP13A8, [Score=180, Expect=1e-50]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=300, Expect=4e-96]} {RNA1509_49442} {RNA1310_14452} {RNA815_6310}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25006

0.19

Mlig455_058387

Neo: -

Age: -

CYP3A5

Mlig455_058387 {REF} {Length: 3128} {Pfam: Cytochrome P450 [PF00067.24, score=320.3]} {Human: ENSG00000106258, CYP3A5, cytochrome P450 family 3 subfamily A member 5, [Score=271, Expect=7e-85]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=269, Expect=8e-84]; ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=261, Expect=2e-80]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=261, Expect=5e-81]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=267, Expect=3e-83]; ENSMUSG00000038656, Cyp3a16, cytochrome P450, family 3, subfamily a, polypeptide 16, [Score=261, Expect=7e-81]; ENSMUSG00000056035, Cyp3a11, cytochrome P450, family 3, subfamily a, polypeptide 11, [Score=260, Expect=1e-80]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=259, Expect=4e-80]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=259, Expect=4e-80]} {Dmel: FBgn0033775, Cyp9h1, [RH, Score=226, Expect=1e-67]} {Celegans: WBGene00011674, cyp-13A8, Putative cytochrome P450 CYP13A8, [Score=180, Expect=1e-50]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=300, Expect=4e-96]} {RNA1509_49442} {RNA1310_14452} {RNA815_6310}

Cumulative graph for MligTC455_25006

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_25006

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25006	9	0.19	Mlig455_058387	Neo: - Age: -	CYP3A5	1	-	-	-	-	-	1.000	Mlig455_058387 {REF} {Length: 3128} {Pfam: Cytochrome P450 [PF00067.24, score=320.3]} {Human: ENSG00000106258, CYP3A5, cytochrome P450 family 3 subfamily A member 5, [Score=271, Expect=7e-85]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=269, Expect=8e-84]; ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=261, Expect=2e-80]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=261, Expect=5e-81]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=267, Expect=3e-83]; ENSMUSG00000038656, Cyp3a16, cytochrome P450, family 3, subfamily a, polypeptide 16, [Score=261, Expect=7e-81]; ENSMUSG00000056035, Cyp3a11, cytochrome P450, family 3, subfamily a, polypeptide 11, [Score=260, Expect=1e-80]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=259, Expect=4e-80]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=259, Expect=4e-80]} {Dmel: FBgn0033775, Cyp9h1, [RH, Score=226, Expect=1e-67]} {Celegans: WBGene00011674, cyp-13A8, Putative cytochrome P450 CYP13A8, [Score=180, Expect=1e-50]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=300, Expect=4e-96]} {RNA1509_49442} {RNA1310_14452} {RNA815_6310}
2.	MligTC455_06998	21	0.44	Mlig455_000331, Mlig455_004164	Neo: - Age: - Region-enriched R4: 4.362/0.00332		0.988	-	-	-	-	-	0.988	Mlig455_000331 {REF} {Length: 840} {NoTransDecoderORF} {RNA1310_100060} {RNA815_55594} Mlig455_004164 {REF} {Length: 229} {NoTransDecoderORF} {RNA1310_83082} {RNA815_55594}
3.	MligTC455_45915	38	0.79	Mlig455_025387	Neo: - Age: - Region-enriched R5: 3.133/0.04924	TRAF3IP1	0.971	-	-	-	-	-	0.971	Mlig455_025387 {REF} {Length: 1590} {Pfam: Microtubule-binding protein MIP-T3 C-terminal region [PF17749.3, score=132.0]; Takusan [PF04822.15, score=19.6]} {Human: ENSG00000204104, TRAF3IP1, TRAF3 interacting protein 1, [Score=162, Expect=5e-43]} {Mouse: ENSMUSG00000034292, Traf3ip1, TRAF3 interacting protein 1, [Score=163, Expect=1e-43]} {Celegans: WBGene00001127, dyf-11, [Score=65.9, Expect=2e-11]} {Smed: dd_Smed_v6_10562_0_1, dd_Smed_v6_10562_0_1, [Score=121, Expect=1e-29]} {RNA1509_5107} {RNA1310_14186.1} {RNA815_2859}
4.	MligTC455_16961	104	2.16	Mlig455_067541	Neo: - Age: Down-Up-Down Region-enriched R8: 7.114/0.00000		0.966	-	-	-	-	-	0.966	Mlig455_067541 {REF} {Length: 3643} {RNA1310_42516} {RNA815_31391}
5.	MligTC455_22744	16	0.32	Mlig455_011656, Mlig455_011657, Mlig455_049929	Neo: Int S/G2/M Age: -		0.964	-	-	-	-	-	0.964	Mlig455_011656 {REF} {Length: 1975} {RNA1310_84881} {RNA815_44630} Mlig455_011657 {REF} {Length: 1205} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.0]} {RNA1310_63598} Mlig455_049929 {REF} {Length: 4659} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.3]} {RNA1310_84881} {RNA815_44630}
6.	MligTC455_03871	10	0.2	Mlig455_025833, Mlig455_025894	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_025833 {REF} {Length: 1160} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=90.0]; HSP20-like domain found in ArsA [PF17886.3, score=27.4]} {Dmel: FBgn0001225, Hsp26, Heat shock protein 26, [RH, Score=58.2, Expect=7e-10]} {Celegans: WBGene00008592, F08H9.4, [Score=57.8, Expect=8e-11]} {Smed: dd_Smed_v6_1039_0_1, dd_Smed_v6_1039_0_1, [RH, Score=99.8, Expect=7e-25]} {RNA1509_26837} {RNA1310_48105} {RNA815_21766} Mlig455_025894 {REF} {Length: 1891} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=40.7]} {RNA1509_42448} {RNA1310_48105} {RNA815_21766}
7.	MligTC455_00801	10	0.2	Mlig455_032874	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_032874 {REF} {Length: 542} {NoTransDecoderORF} {RNA1310_26475}
8.	MligTC455_11226	171	3.57	Mlig455_010762	Neo: - Age: - Region-enriched R8: 5.355/0.00388		0.95	-	-	-	-	-	0.950	Mlig455_010762 {REF} {Length: 826} {RNA1509_21716} {RNA1310_48870} {RNA815_12215.2}