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Results for MligTC455_45915

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_45915 38 0.79 Mlig455_025387

Neo: -

Age: -

Region-enriched R5: 3.133/0.04924

 TRAF3IP1 Mlig455_025387 {REF} {Length: 1590} {Pfam: Microtubule-binding protein MIP-T3 C-terminal region [PF17749.3, score=132.0]; Takusan [PF04822.15, score=19.6]} {Human: ENSG00000204104, TRAF3IP1, TRAF3 interacting protein 1, [Score=162, Expect=5e-43]} {Mouse: ENSMUSG00000034292, Traf3ip1, TRAF3 interacting protein 1, [Score=163, Expect=1e-43]} {Celegans: WBGene00001127, dyf-11, [Score=65.9, Expect=2e-11]} {Smed: dd_Smed_v6_10562_0_1, dd_Smed_v6_10562_0_1, [Score=121, Expect=1e-29]} {RNA1509_5107} {RNA1310_14186.1} {RNA815_2859}

Cumulative graph for MligTC455_45915

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.181 1.045 0.99972 1.00000
RegionR2 -0.592 1.045 0.94405 1.00000
RegionR3 0.913 1.045 0.48303 0.98453
RegionR4 4.555 1.045 0.01264 0.07260
RegionR5 3.133 1.045 0.00804 0.04924
RegionR6 1.479 1.045 0.30148 0.89218
RegionR7 0.728 1.045 0.69438 1.00000
RegionR8 -4.035 1.045 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.82 1.045 1.00000 1.00000
RegenerationR2 -0.815 1.045 0.30393 0.74469
RegenerationR3 -1.318 1.045 0.22710 0.66235
RegenerationR4 -1.025 1.045 0.33215 0.76606
RegenerationR5 -2.926 1.045 0.00921 0.17274
RegenerationR6 -1.021 1.045 0.35459 0.69973
RegenerationBL -4.475 1.045 1.00000 1.00000
RegenerationTP 0.73 1.045 0.75574 1.00000


Genes with expression patterns similar to MligTC455_45915

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_45915 38 0.79 Mlig455_025387

Neo: -

Age: -

Region-enriched R5: 3.133/0.04924

 TRAF3IP1 4 1.000 - 1.000 1.000 - 1.000 Mlig455_025387 {REF} {Length: 1590} {Pfam: Microtubule-binding protein MIP-T3 C-terminal region [PF17749.3, score=132.0]; Takusan [PF04822.15, score=19.6]} {Human: ENSG00000204104, TRAF3IP1, TRAF3 interacting protein 1, [Score=162, Expect=5e-43]} {Mouse: ENSMUSG00000034292, Traf3ip1, TRAF3 interacting protein 1, [Score=163, Expect=1e-43]} {Celegans: WBGene00001127, dyf-11, [Score=65.9, Expect=2e-11]} {Smed: dd_Smed_v6_10562_0_1, dd_Smed_v6_10562_0_1, [Score=121, Expect=1e-29]} {RNA1509_5107} {RNA1310_14186.1} {RNA815_2859}
2. MligTC455_34014 33 0.69 Mlig455_033785

Neo: -

Age: -

 0.998 - - 0.998 - - - Mlig455_033785 {REF} {Length: 5958} {RNA1509_56561} {RNA1310_25982} {RNA815_38909}
3. MligTC455_01695 25 0.52 Mlig455_015208

Neo: -

Age: -

 0.991 - - 0.991 - - - Mlig455_015208 {REF} {Length: 605} {NoTransDecoderORF} {RNA1509_45595} {RNA1310_13430.1} {RNA815_343.1}
4. MligTC455_52753 76 1.57 Mlig455_063006

Neo: -

Age: -

 0.981 - - 0.981 - - - Mlig455_063006 {REF} {Length: 1514} {Pfam: Family of unknown function (DUF5358) [PF17311.4, score=24.7]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7717.1}
5. MligTC455_29151 72 1.49 Mlig455_034331

Neo: -

Age: -

 0.978 - - 0.978 - - - Mlig455_034331 {REF} {Length: 6176} {RNA1509_833} {RNA1310_22564} {RNA815_16197}
6. MligTC455_29061 287 5.98 Mlig455_061344

Neo: -

Age: Up-Up-Down

 0.974 - - 0.974 - - - Mlig455_061344 {REF} {Length: 4569} {RNA1509_40044} {RNA1310_6084, RNA1509_40044} {RNA1509_40044, RNA815_5170.1}
7. MligTC455_25006 9 0.19 Mlig455_058387

Neo: -

Age: -

 CYP3A5 0.971 - - - - - 0.971 Mlig455_058387 {REF} {Length: 3128} {Pfam: Cytochrome P450 [PF00067.24, score=320.3]} {Human: ENSG00000106258, CYP3A5, cytochrome P450 family 3 subfamily A member 5, [Score=271, Expect=7e-85]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=269, Expect=8e-84]; ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=261, Expect=2e-80]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=261, Expect=5e-81]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=267, Expect=3e-83]; ENSMUSG00000038656, Cyp3a16, cytochrome P450, family 3, subfamily a, polypeptide 16, [Score=261, Expect=7e-81]; ENSMUSG00000056035, Cyp3a11, cytochrome P450, family 3, subfamily a, polypeptide 11, [Score=260, Expect=1e-80]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=259, Expect=4e-80]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=259, Expect=4e-80]} {Dmel: FBgn0033775, Cyp9h1, [RH, Score=226, Expect=1e-67]} {Celegans: WBGene00011674, cyp-13A8, Putative cytochrome P450 CYP13A8, [Score=180, Expect=1e-50]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=300, Expect=4e-96]} {RNA1509_49442} {RNA1310_14452} {RNA815_6310}
8. MligTC455_09811 50 1.04 Mlig455_018583

Neo: -

Age: -

 LRP11 0.97 - - 0.970 - - - Mlig455_018583 {REF} {Length: 3580} {Pfam: MANEC domain [PF07502.16, score=61.3]; Low-density lipoprotein receptor domain class A [PF00057.20, score=24.4]} {Human: ENSG00000120256, LRP11, LDL receptor related protein 11, [Score=55.1, Expect=3e-07]} {Mouse: ENSMUSG00000019796, Lrp11, low density lipoprotein receptor-related protein 11, [Score=58.5, Expect=1e-08]; ENSMUSG00000116377, Lrp11, low density lipoprotein receptor-related protein 11, [Score=58.5, Expect=1e-08]} {Dmel: FBgn0027550, CG6495, [RH, Score=92.8, Expect=2e-19]} {Smed: dd_Smed_v6_10934_0_1, dd_Smed_v6_10934_0_1, [Score=107, Expect=2e-24]} {RNA1509_12808, RNA1509_37717, RNA1509_58892} {RNA1310_11889, RNA1509_37717, RNA1509_58892} {RNA1509_37717, RNA1509_58892, RNA815_19283}
9. MligTC455_33016 46 0.96 Mlig455_030897

Neo: -

Age: -

 UTP20 0.968 - - 0.968 - - - Mlig455_030897 {REF} {Length: 9860} {TRANSSPLICED} {Pfam: Down-regulated in metastasis [PF07539.14, score=169.0]} {Human: ENSG00000120800, UTP20, UTP20, small subunit processome component, [Score=269, Expect=3e-71]} {Mouse: ENSMUSG00000004356, Utp20, UTP20 small subunit processome component, [RH, Score=271, Expect=3e-72]} {Dmel: FBgn0034734, CG4554, [RH, Score=181, Expect=6e-45]} {Celegans: WBGene00007050, utp-20, UTP small subunit (SSU) processome component homolog, [RH, Score=167, Expect=7e-41]} {Smed: dd_Smed_v6_5777_0_1, dd_Smed_v6_5777_0_1, [Score=130, Expect=1e-29]} {RNA1509_30314} {RNA1310_332, RNA1509_30314} {RNA1509_30314, RNA815_127.1}
10. MligTC455_09699 68 1.41 Mlig455_007615

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_007615 {REF} {Length: 485} {NoTransDecoderORF} {RNA1310_83381} {RNA815_43376}
11. MligTC455_36284 36 0.76 Mlig455_040308

Neo: -

Age: -

 0.967 - - 0.967 - - - Mlig455_040308 {REF} {Length: 799} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_121194} {RNA815_19856}
12. MligTC455_54059 396 8.24 Mlig455_054904, Mlig455_065608

Neo: Irradiation

Age: -

 0.964 - - 0.964 - - -

Mlig455_054904 {REF} {Length: 1225} {TRANSSPLICED} {RNA1509_27599} {RNA1310_51634} {RNA815_28212}

Mlig455_065608 {REF} {Length: 1223} {TRANSSPLICED} {RNA1509_27599, RNA1509_41652} {RNA1310_51634, RNA1509_27599, RNA1509_41652} {RNA1509_27599, RNA1509_41652, RNA815_28212}
13. MligTC455_06998 21 0.44 Mlig455_000331, Mlig455_004164

Neo: -

Age: -

Region-enriched R4: 4.362/0.00332

 0.96 - - - - - 0.960

Mlig455_000331 {REF} {Length: 840} {NoTransDecoderORF} {RNA1310_100060} {RNA815_55594}

Mlig455_004164 {REF} {Length: 229} {NoTransDecoderORF} {RNA1310_83082} {RNA815_55594}
14. MligTC455_12384 30 0.62 Mlig455_014121, Mlig455_014129

Neo: -

Age: -

Regeneration-downregulated R2: -5.903

Regeneration-depleted R2: -5.903

 MARK3, MARK4 0.959 - - 0.959 - - -

Mlig455_014121 {REF} {Length: 3626} {Pfam: Protein kinase domain [PF00069.27, score=234.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=28.3]; Kinase-like [PF14531.8, score=26.9]; ABC1 atypical kinase-like domain [PF03109.18, score=21.4]; Ternary complex associated domain 9 [PF19974.1, score=18.3]} {Human: ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=219, Expect=7e-60]; ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=215, Expect=2e-58]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=212, Expect=2e-57]} {Mouse: ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=217, Expect=4e-59]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=215, Expect=1e-58]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=213, Expect=1e-57]} {Dmel: FBgn0026063, KP78b, [Score=218, Expect=1e-60]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=220, Expect=5e-59]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=414, Expect=7e-133]} {RNA1310_41210} {RNA815_38347}

Mlig455_014129 {REF} {Length: 3531} {Pfam: Protein kinase domain [PF00069.27, score=107.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.2]} {Human: ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=93.2, Expect=3e-19]} {Mouse: ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=86.7, Expect=3e-17]; ENSMUSG00000009772, Nuak2, NUAK family, SNF1-like kinase, 2, [Score=84.0, Expect=2e-16]; ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=83.2, Expect=4e-16]} {Dmel: FBgn0262103, Sik3, Salt-inducible kinase 3, [Score=87.4, Expect=2e-17]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=86.3, Expect=3e-17]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=151, Expect=1e-38]} {RNA1310_80369} {RNA815_38347}
15. MligTC455_51127 32 0.66 Mlig455_054349

Neo: -

Age: -

 GLRA2 0.959 - - 0.959 - - - Mlig455_054349 {REF} {Length: 2070} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=108.3]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=317, Expect=6e-102]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=316, Expect=1e-101]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=312, Expect=3e-100]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=317, Expect=3e-102]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=316, Expect=1e-101]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=308, Expect=1e-98]} {Dmel: FBgn0024963, GluClalpha, [Score=288, Expect=3e-91]} {Celegans: WBGene00020767, lgc-40, Ligand-Gated ion Channel, [RH, Score=260, Expect=4e-80]} {Smed: dd_Smed_v6_10794_0_1, dd_Smed_v6_10794_0_1, [Score=261, Expect=1e-80]} {RNA1310_34255} {RNA815_61641}
16. MligTC455_46840 81 1.69 Mlig455_015487

Neo: -

Age: logFC(26M/2M)=0.334

 LRG1 0.958 - - 0.958 - - - Mlig455_015487 {REF} {Length: 3538} {Pfam: Leucine rich repeat [PF13855.8, score=38.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=36.4]} {Human: ENSG00000171236, LRG1, leucine rich alpha-2-glycoprotein 1, [Score=50.1, Expect=6e-06]; ENSG00000165383, LRRC18, leucine rich repeat containing 18, [Score=49.3, Expect=7e-06]} {Mouse: ENSMUSG00000043496, Tril, TLR4 interactor with leucine-rich repeats, [Score=53.9, Expect=4e-07]; ENSMUSG00000041673, Lrrc18, leucine rich repeat containing 18, [Score=53.1, Expect=4e-07]} {Dmel: FBgn0010452, trn, tartan, [Score=51.2, Expect=2e-06]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=52.8, Expect=7e-07]} {RNA1509_37547} {RNA1310_14038} {RNA815_17015}
17. MligTC455_13265 61 1.26 Mlig455_015223

Neo: -

Age: -

 0.955 - - 0.955 - - - Mlig455_015223 {REF} {Length: 631} {RNA1310_72558} {RNA815_28618}
18. MligTC455_28116 36 0.74 Mlig455_023222, Mlig455_068295

Neo: -

Age: Down-Down-Up

 0.955 - - 0.955 - - -

Mlig455_023222 {REF} {Length: 2305} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1}

Mlig455_068295 {REF} {Length: 1692} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_17069.1}
19. MligTC455_12304 42 0.87 Mlig455_070558

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_070558 {REF} {Length: 1968} {Pfam: Integrase core domain [PF00665.28, score=29.3]} {Smed: dd_Smed_v6_11155_0_6, dd_Smed_v6_11155_0_6, [Score=56.2, Expect=6e-11]} {RNA1509_21400} {RNA1310_37574} {RNA815_2733.1}
20. MligTC455_22744 16 0.32 Mlig455_011656, Mlig455_011657, Mlig455_049929

Neo: Int S/G2/M

Age: -

 0.954 - - - - - 0.954

Mlig455_011656 {REF} {Length: 1975} {RNA1310_84881} {RNA815_44630}

Mlig455_011657 {REF} {Length: 1205} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.0]} {RNA1310_63598}

Mlig455_049929 {REF} {Length: 4659} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=18.3]} {RNA1310_84881} {RNA815_44630}
21. MligTC455_27813 66 1.37 Mlig455_071014

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_071014 {REF} {Length: 2810} {RNA1509_55315} {RNA1310_683.1} {RNA815_2170.1}
22. MligTC455_40614 25 0.52 Mlig455_030882

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_030882 {REF} {Length: 1647} {RNA1509_37399} {RNA1310_18527} {RNA815_9560}
23. MligTC455_41249 61 1.27 Mlig455_010465

Neo: -

Age: Down-Down-Up

 0.953 - - 0.953 - - - Mlig455_010465 {REF} {Length: 2724} {RNA1310_39237} {RNA815_40339}
24. MligTC455_50974 24 0.5 Mlig455_063961

Neo: -

Age: Down-Up-Down

 RAB39B 0.953 - - 0.953 - - - Mlig455_063961 {REF} {Length: 2112} {Pfam: Ras family [PF00071.24, score=142.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=78.7]; ADP-ribosylation factor family [PF00025.23, score=34.1]; RsgA GTPase [PF03193.18, score=30.0]; 50S ribosome-binding GTPase [PF01926.25, score=29.0]; Gtr1/RagA G protein conserved region [PF04670.14, score=23.9]} {Human: ENSG00000155961, RAB39B, RAB39B, member RAS oncogene family, [Score=121, Expect=2e-33]; ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=117, Expect=8e-32]} {Mouse: ENSMUSG00000031202, Rab39b, RAB39B, member RAS oncogene family, [Score=121, Expect=2e-33]; ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=117, Expect=5e-32]; ENSMUSG00000020132, Rab21, RAB21, member RAS oncogene family, [Score=115, Expect=4e-31]} {Dmel: FBgn0039966, Rab21, [Score=120, Expect=4e-33]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=120, Expect=3e-33]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=117, Expect=2e-32]} {RNA1310_44104} {RNA815_31961}
25. MligTC455_48119 56 1.16 Mlig455_004356

Neo: -

Age: Up-Down-Up

 RNF146 0.951 - - 0.951 - - - Mlig455_004356 {REF} {Length: 1906} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=53.0]; Ring finger domain [PF13639.8, score=28.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=25.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.9]} {Human: ENSG00000118518, RNF146, ring finger protein 146, [RH, Score=149, Expect=3e-42]} {Mouse: ENSMUSG00000038876, Rnf146, ring finger protein 146, [RH, Score=149, Expect=3e-42]} {Dmel: FBgn0036897, CG8786, [RH, Score=151, Expect=2e-42]} {Celegans: WBGene00008330, C55A6.1, [RH, Score=115, Expect=5e-31]} {Smed: dd_Smed_v6_5084_0_1, dd_Smed_v6_5084_0_1, [RH, Score=127, Expect=1e-36]} {RNA1509_54944} {RNA1310_29204} {RNA815_13885}

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