Data search
Results for MligTC455_25114
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25114 | 1549 | 32.27 | Mlig455_024420 | Neo: - Age: Down-Down-Up |
Mlig455_024420 {REF} {Length: 1960} {TRANSSPLICED} {RNA1509_9338} {RNA1310_11932} {RNA815_13318} |
Cumulative graph for MligTC455_25114
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.35 | 5.252 | 0.62853 | 1.00000 | |
| RegionR2 | -0.32 | 5.252 | 0.36921 | 0.76386 | |
| RegionR3 | -0.043 | 5.252 | 0.88414 | 1.00000 | |
| RegionR4 | 0.615 | 5.252 | 0.06851 | 0.23862 | |
| RegionR5 | 0.979 | 5.252 | 0.00011 | 0.00174 | |
| RegionR6 | 0.256 | 5.252 | 0.37060 | 0.95095 | |
| RegionR7 | -0.421 | 5.252 | 0.25677 | 0.88383 | |
| RegionR8 | -0.715 | 5.252 | 0.13120 | 0.66314 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.294 | 5.252 | 0.74985 | 1.00000 | |
| RegenerationR2 | -0.399 | 5.252 | 0.22626 | 0.67427 | |
| RegenerationR3 | -0.483 | 5.252 | 0.16481 | 0.59887 | |
| RegenerationR4 | -0.591 | 5.252 | 0.09518 | 0.47999 | |
| RegenerationR5 | -0.76 | 5.252 | 0.01812 | 0.23358 | |
| RegenerationR6 | -0.054 | 5.252 | 0.87108 | 1.00000 | |
| RegenerationBL | 0.446 | 5.252 | 0.22607 | 0.57564 | |
| RegenerationTP | -0.148 | 5.252 | 0.74194 | 1.00000 |
Genes with expression patterns similar to MligTC455_25114
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25114 | 1549 | 32.27 | Mlig455_024420 | Neo: - Age: Down-Down-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_024420 {REF} {Length: 1960} {TRANSSPLICED} {RNA1509_9338} {RNA1310_11932} {RNA815_13318} | |
| 2. | MligTC455_25115 | 2895 | 60.32 | Mlig455_024538, Mlig455_024574 | Neo: Int S/G2/M Age: - |
BAK1 | 5.812 | 0.988 | 0.959 | 0.991 | 0.995 | 0.972 | 0.907 | Mlig455_024538 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=101.2]} {Human: ENSG00000030110, BAK1, BCL2 antagonist/killer 1, [RH, Score=138, Expect=7e-40]} {Mouse: ENSMUSG00000057789, Bak1, BCL2-antagonist/killer 1, [RH, Score=132, Expect=1e-37]} {Smed: dd_Smed_v6_2886_0_1, dd_Smed_v6_2886_0_1, [RH, Score=77.4, Expect=3e-17]} {RNA1509_9338} {RNA1310_11932, RNA1509_9338} {RNA1509_9338, RNA815_13318} Mlig455_024574 {REF} {Length: 1962} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=101.3]} {Human: ENSG00000030110, BAK1, BCL2 antagonist/killer 1, [RH, Score=138, Expect=5e-40]} {Mouse: ENSMUSG00000057789, Bak1, BCL2-antagonist/killer 1, [RH, Score=133, Expect=4e-38]} {Smed: dd_Smed_v6_2886_0_1, dd_Smed_v6_2886_0_1, [RH, Score=78.2, Expect=2e-17]} {RNA1509_35879, RNA1509_56904, RNA1509_7089, RNA1509_9338} {RNA1310_11932, RNA1509_35879, RNA1509_56904, RNA1509_7089} {RNA1509_35879, RNA1509_56904, RNA1509_7089, RNA815_13318} |
| 3. | MligTC455_12809 | 506 | 10.55 | Mlig455_037639 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.705 Region-enriched R5: 1.347/0.01568 |
2.559 | 0.704 | - | - | 0.895 | 0.960 | - | Mlig455_037639 {REF} {Length: 2516} {TRANSSPLICED} {Pfam: HAP1 N-terminal conserved region [PF04849.15, score=20.9]} {RNA1509_14533} {RNA1310_10263.1} {RNA815_2693.1} | |
| 4. | MligTC455_34611 | 686 | 14.3 | Mlig455_050163 | Neo: - Age: - |
2.496 | - | - | 0.774 | 0.952 | - | 0.770 | Mlig455_050163 {REF} {Length: 2562} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=107.5]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=116, Expect=1e-33]} {RNA1509_43888, RNA1509_46399} {RNA1310_19849.1, RNA1509_43888} {RNA1509_43888, RNA815_14023} | |
| 5. | MligTC455_47208 | 1083 | 22.56 | Mlig455_034771 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.670 Regeneration-enriched BL: 1.670 |
E2F4 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_034771 {REF} {Length: 2224} {TRANSSPLICED} {Pfam: E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=89.0]; E2F transcription factor CC-MB domain [PF16421.7, score=79.6]} {Human: ENSG00000205250, E2F4, E2F transcription factor 4, [RH, Score=207, Expect=2e-62]} {Mouse: ENSMUSG00000014859, E2f4, E2F transcription factor 4, [RH, Score=206, Expect=4e-62]} {Dmel: FBgn0011766, E2f1, E2F transcription factor 1, [RH, Score=107, Expect=5e-25]} {Celegans: WBGene00001161, efl-1, E2F-like (Mammalian transcription factor); EFL-1, [RH, Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_3130_0_1, dd_Smed_v6_3130_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1310_22021, RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1509_11778, RNA1509_30431, RNA1509_39358, RNA815_22661} |
| 6. | MligTC455_38902 | 1000 | 20.84 | Mlig455_016999 | Neo: - Age: - |
METTL13 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_016999 {REF} {Length: 2194} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=43.6]; Methyltransferase domain [PF13649.8, score=42.8]; Methyltransferase domain [PF13847.8, score=35.9]; Methyltransferase domain [PF08242.14, score=30.2]; Methyltransferase small domain [PF05175.16, score=24.7]; Methyltransferase domain [PF13679.8, score=22.5]} {Human: ENSG00000010165, METTL13, methyltransferase like 13, [RH, Score=236, Expect=8e-68]} {Mouse: ENSMUSG00000026694, Mettl13, methyltransferase like 13, [RH, Score=248, Expect=2e-72]} {Dmel: FBgn0032873, CG2614, [RH, Score=172, Expect=1e-45]} {Celegans: WBGene00015282, C01B10.8, [RH, Score=149, Expect=7e-38]} {Smed: dd_Smed_v6_8741_0_1, dd_Smed_v6_8741_0_1, [RH, Score=186, Expect=9e-51]} {RNA1509_11573} {RNA1310_11646.1} {RNA815_4084.1} |
| 7. | MligTC455_38901 | 1001 | 20.86 | Mlig455_016893 | Neo: - Age: - |
METTL13 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_016893 {REF} {Length: 2256} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF08241.14, score=43.6]; Methyltransferase domain [PF13649.8, score=43.0]; Methyltransferase domain [PF13847.8, score=35.8]; Methyltransferase domain [PF08242.14, score=30.1]; Methyltransferase small domain [PF05175.16, score=24.2]; Methyltransferase domain [PF13679.8, score=22.4]} {Human: ENSG00000010165, METTL13, methyltransferase like 13, [RH, Score=236, Expect=1e-67]} {Mouse: ENSMUSG00000026694, Mettl13, methyltransferase like 13, [RH, Score=248, Expect=3e-72]} {Dmel: FBgn0032873, CG2614, [RH, Score=172, Expect=2e-45]} {Celegans: WBGene00015282, C01B10.8, [RH, Score=149, Expect=7e-38]} {Smed: dd_Smed_v6_8741_0_1, dd_Smed_v6_8741_0_1, [RH, Score=186, Expect=1e-50]} {RNA1509_56015} {RNA1310_11646.2, RNA1509_56015} {RNA1509_56015, RNA815_4084.1} |
Berezikov Lab - 2020-2021 © ERIBA