Data search


search
Exact
Search

Results for MligTC455_47208

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47208 1083 22.56 Mlig455_034771

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.670

Regeneration-enriched BL: 1.670

E2F4 Mlig455_034771 {REF} {Length: 2224} {TRANSSPLICED} {Pfam: E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=89.0]; E2F transcription factor CC-MB domain [PF16421.7, score=79.6]} {Human: ENSG00000205250, E2F4, E2F transcription factor 4, [RH, Score=207, Expect=2e-62]} {Mouse: ENSMUSG00000014859, E2f4, E2F transcription factor 4, [RH, Score=206, Expect=4e-62]} {Dmel: FBgn0011766, E2f1, E2F transcription factor 1, [RH, Score=107, Expect=5e-25]} {Celegans: WBGene00001161, efl-1, E2F-like (Mammalian transcription factor); EFL-1, [RH, Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_3130_0_1, dd_Smed_v6_3130_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1310_22021, RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1509_11778, RNA1509_30431, RNA1509_39358, RNA815_22661}

Cumulative graph for MligTC455_47208

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.952 4.685 0.22151 0.86446
RegionR2 -0.114 4.685 0.77480 1.00000
RegionR3 0.209 4.685 0.50413 0.99595
RegionR4 0.341 4.685 0.34561 0.66640
RegionR5 -0.077 4.685 0.79998 1.00000
RegionR6 0.055 4.685 0.86585 1.00000
RegionR7 0.36 4.685 0.38236 1.00000
RegionR8 -1.726 4.685 0.01740 0.25614

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.455 4.685 0.00654 0.38745
RegenerationR2 0.038 4.685 0.90791 1.00000
RegenerationR3 -0.008 4.685 0.98292 1.00000
RegenerationR4 0.244 4.685 0.49550 0.86728
RegenerationR5 0.832 4.685 0.01096 0.18494
RegenerationR6 1.232 4.685 0.00037 0.01970
RegenerationBL 1.67 4.685 0.00005 0.00252 Specific for BL: 1.670
RegenerationTP 0.817 4.685 0.13861 0.55644


Genes with expression patterns similar to MligTC455_47208

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47208 1083 22.56 Mlig455_034771

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 1.670

Regeneration-enriched BL: 1.670

E2F4 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_034771 {REF} {Length: 2224} {TRANSSPLICED} {Pfam: E2F/DP family winged-helix DNA-binding domain [PF02319.22, score=89.0]; E2F transcription factor CC-MB domain [PF16421.7, score=79.6]} {Human: ENSG00000205250, E2F4, E2F transcription factor 4, [RH, Score=207, Expect=2e-62]} {Mouse: ENSMUSG00000014859, E2f4, E2F transcription factor 4, [RH, Score=206, Expect=4e-62]} {Dmel: FBgn0011766, E2f1, E2F transcription factor 1, [RH, Score=107, Expect=5e-25]} {Celegans: WBGene00001161, efl-1, E2F-like (Mammalian transcription factor); EFL-1, [RH, Score=124, Expect=2e-32]} {Smed: dd_Smed_v6_3130_0_1, dd_Smed_v6_3130_0_1, [RH, Score=110, Expect=3e-28]} {RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1310_22021, RNA1509_11778, RNA1509_30431, RNA1509_39358} {RNA1509_11778, RNA1509_30431, RNA1509_39358, RNA815_22661}
2. MligTC455_35115 2916 60.74 Mlig455_030023

Neo: Neoblast, stringent

Age: -

Regeneration-enriched BL: 1.662
Regeneration-enriched R6: 1.336

SRSF4 1.782 - - - 0.950 0.832 - Mlig455_030023 {REF} {Length: 1979} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=96.2]; RNA binding motif [PF08777.13, score=23.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=22.0]; Occluded RNA-recognition motif [PF16842.7, score=21.7]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [Score=188, Expect=5e-55]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [Score=192, Expect=7e-57]} {Dmel: FBgn0004587, B52, [Score=169, Expect=1e-49]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [Score=147, Expect=5e-42]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [Score=179, Expect=7e-54]} {RNA1509_14681, RNA1509_17333, RNA1509_20856, RNA1509_23276, RNA1509_38639, RNA1509_52070, RNA1509_55703} {RNA1310_10967, RNA1509_14681, RNA1509_17333, RNA1509_20856, RNA1509_23276, RNA1509_38639, RNA1509_52070, RNA1509_55703} {RNA1509_14681, RNA1509_17333, RNA1509_20856, RNA1509_23276, RNA1509_38639, RNA1509_52070, RNA1509_55703, RNA815_8646}
3. MligTC455_46302 615 12.82 Mlig455_035429

Neo: -

Age: -

SINHCAF 1.747 - - 0.961 0.786 - - Mlig455_035429 {REF} {Length: 3769} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=66.2]} {Human: ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=63.9, Expect=4e-12]; ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=63.9, Expect=4e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=64.3, Expect=3e-12]} {Dmel: FBgn0266000, CG44774, [Score=62.8, Expect=1e-10]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=79.7, Expect=8e-17]} {RNA1509_37144} {RNA1310_15324} {RNA815_17673}
4. MligTC455_46303 619 12.9 Mlig455_061082

Neo: -

Age: -

SINHCAF 1.742 - - 0.959 0.783 - - Mlig455_061082 {REF} {Length: 3761} {TRANSSPLICED} {Pfam: Protein Family FAM60A [PF15396.8, score=66.2]} {Human: ENSG00000276371, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=63.9, Expect=4e-12]; ENSG00000139146, SINHCAF, SIN3-HDAC complex associated factor, [RH, Score=63.9, Expect=4e-12]} {Mouse: ENSMUSG00000039985, Sinhcaf, SIN3-HDAC complex associated factor, [RH, Score=64.7, Expect=3e-12]} {Dmel: FBgn0266000, CG44774, [Score=62.8, Expect=2e-10]} {Smed: dd_Smed_v6_8876_0_1, dd_Smed_v6_8876_0_1, [RH, Score=79.7, Expect=9e-17]} {RNA1509_37144} {RNA1310_15324} {RNA815_17673}
5. MligTC455_44305 2330 48.55 Mlig455_002521

Neo: -

Age: -

PABPN1 1.703 - - - 0.958 0.745 - Mlig455_002521 {REF} {Length: 1194} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=64.1]} {Human: ENSG00000100836, PABPN1, poly(A) binding protein nuclear 1, [RH, Score=186, Expect=1e-57]; ENSG00000258643, BCL2L2-PABPN1, BCL2L2-PABPN1 readthrough, [RH, Score=181, Expect=2e-55]} {Mouse: ENSMUSG00000022194, Pabpn1, poly(A) binding protein, nuclear 1, [RH, Score=184, Expect=2e-57]; ENSMUSG00000092232, Gm20521, predicted gene 20521, [RH, Score=180, Expect=2e-55]} {Dmel: FBgn0005648, Pabp2, [RH, Score=218, Expect=7e-72]} {Celegans: WBGene00003904, pabp-2, PolyA Binding Protein (Nuclear), [RH, Score=157, Expect=4e-48]} {Smed: dd_Smed_v6_2924_0_1, dd_Smed_v6_2924_0_1, [RH, Score=150, Expect=2e-45]} {RNA1509_10120, RNA1509_16224} {RNA1310_27727, RNA1509_10120, RNA1509_16224} {RNA1509_10120, RNA1509_16224, RNA815_12820}
6. MligTC455_40250 1573 32.77 Mlig455_002988, Mlig455_003004, Mlig455_055610

Neo: Int S/G2/M

Age: Down-Up-Up

1.668 - - - - 0.956 0.712

Mlig455_002988 {REF} {Length: 1297} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372, RNA1509_32504} {RNA1310_16240.1, RNA1509_10372, RNA1509_32504} {RNA1509_10372, RNA1509_32504, RNA815_7817}

Mlig455_003004 {REF} {Length: 1292} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372, RNA1509_31288} {RNA1310_16240.1, RNA1509_31288} {RNA1509_31288, RNA815_7817}

Mlig455_055610 {REF} {Length: 1356} {TRANSSPLICED} {Pfam: Ribosomal RNA-processing protein 7 (RRP7) C-terminal domain [PF12923.9, score=27.0]} {RNA1509_10372} {RNA1310_16240.1} {RNA815_7817}
7. MligTC455_42138 1567 32.64 Mlig455_033226

Neo: -

Age: Down-Down-Up

UBA6 1.662 - - 0.957 0.705 - - Mlig455_033226 {REF} {Length: 3401} {TRANSSPLICED} {Pfam: ThiF family [PF00899.23, score=302.0]; Ubiquitin-activating enzyme active site [PF10585.11, score=198.0]; Ubiquitin-activating enzyme E1 FCCH domain [PF16190.7, score=31.3]; Ubiquitin fold domain [PF09358.12, score=30.4]} {Human: ENSG00000033178, UBA6, ubiquitin like modifier activating enzyme 6, [RH, Score=772, Expect=0.0]} {Mouse: ENSMUSG00000035898, Uba6, ubiquitin-like modifier activating enzyme 6, [RH, Score=772, Expect=0.0]} {Dmel: FBgn0023143, Uba1, Ubiquitin activating enzyme 1, [Score=546, Expect=8e-178]} {Celegans: WBGene00006699, uba-1, UBA (Human ubiquitin) related, [Score=477, Expect=2e-151]} {Smed: dd_Smed_v6_2377_0_1, dd_Smed_v6_2377_0_1, [Score=561, Expect=0.0]} {RNA1509_14558} {RNA1310_3925, RNA1509_14558} {RNA1509_14558, RNA815_1162}
8. MligTC455_25605 1172 24.43 Mlig455_002017, Mlig455_002107, Mlig455_002216

Neo: -

Age: -

VPS53 0.973 - - - - - 0.973

Mlig455_002017 {REF} {Length: 3893} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=313.6]} {Human: ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=664, Expect=0.0]; ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=668, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=622, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=9e-145]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=543, Expect=1e-180]} {RNA1509_25620, RNA1509_36710, RNA1509_54508} {RNA1310_3890, RNA1509_36710, RNA1509_54508} {RNA1509_36710, RNA1509_54508, RNA815_1881}

Mlig455_002107 {REF} {Length: 3499} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=314.4]} {Human: ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]; ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=621, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=2e-144]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_25620} {RNA1310_3890, RNA1509_25620} {RNA1509_25620, RNA815_1881}

Mlig455_002216 {REF} {Length: 3692} {TRANSSPLICED} {Pfam: Vps53-like, N-terminal [PF04100.14, score=314.4]} {Human: ENSG00000283883, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]; ENSG00000141252, VPS53, VPS53, GARP complex subunit, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000017288, Vps53, VPS53 GARP complex subunit, [RH, Score=665, Expect=0.0]} {Dmel: FBgn0031598, Vps53, Vacuolar protein sorting 53, [RH, Score=620, Expect=0.0]} {Celegans: WBGene00011502, vps-53, Vacuolar protein sorting-associated protein 53 homolog, [RH, Score=447, Expect=2e-144]} {Smed: dd_Smed_v6_6069_0_1, dd_Smed_v6_6069_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_24765, RNA1509_25620} {RNA1310_3890, RNA1509_24765} {RNA1509_24765, RNA815_1881}
9. MligTC455_42857 1247 25.98 Mlig455_035150

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.348

EIF1AD 0.968 - - 0.968 - - - Mlig455_035150 {REF} {Length: 1056} {TRANSSPLICED} {Pfam: Translation initiation factor 1A / IF-1 [PF01176.21, score=67.2]} {Human: ENSG00000175376, EIF1AD, eukaryotic translation initiation factor 1A domain containing, [RH, Score=129, Expect=7e-39]} {Mouse: ENSMUSG00000024841, Eif1ad, eukaryotic translation initiation factor 1A domain containing, [RH, Score=131, Expect=5e-39]} {Dmel: FBgn0051957, CG31957, [RH, Score=114, Expect=2e-32]} {Celegans: WBGene00014112, ZK856.11, Probable RNA-binding protein EIF1AD, [RH, Score=93.6, Expect=1e-24]} {Smed: dd_Smed_v6_8143_0_1, dd_Smed_v6_8143_0_1, [RH, Score=71.6, Expect=2e-16]} {RNA1509_13682, RNA1509_51171, RNA1509_55967} {RNA1310_36398.1, RNA1509_51171, RNA1509_55967} {RNA1509_51171, RNA1509_55967, RNA815_37405}
10. MligTC455_26503 114 2.37 Mlig455_055217

Neo: Int S/G2/M

Age: -

Region-enriched R4: 7.372/0.00058

CPSF6 0.965 - - - 0.965 - - Mlig455_055217 {REF} {Length: 5089} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=26.5]} {Human: ENSG00000111605, CPSF6, cleavage and polyadenylation specific factor 6, [RH, Score=139, Expect=1e-34]} {Mouse: ENSMUSG00000055531, Cpsf6, cleavage and polyadenylation specific factor 6, [RH, Score=139, Expect=2e-34]} {Dmel: FBgn0035872, CG7185, [RH, Score=133, Expect=3e-32]} {Celegans: WBGene00008362, cfim-2, Cleavage Factor IM (CFIm) homolog, [RH, Score=96.7, Expect=7e-21]} {Smed: dd_Smed_v6_4839_0_1, dd_Smed_v6_4839_0_1, [RH, Score=152, Expect=2e-39]} {RNA1509_8357} {RNA1310_5998} {RNA815_15488}
11. MligTC455_37890 984 20.5 Mlig455_042120

Neo: -

Age: Up-Down-Down

MOB1B 0.962 - - 0.962 - - - Mlig455_042120 {REF} {Length: 5175} {TRANSSPLICED} {Pfam: Mob1/phocein family [PF03637.19, score=262.4]} {Human: ENSG00000173542, MOB1B, MOB kinase activator 1B, [RH, Score=374, Expect=1e-132]; ENSG00000114978, MOB1A, MOB kinase activator 1A, [RH, Score=371, Expect=1e-131]} {Mouse: ENSMUSG00000006262, Mob1b, MOB kinase activator 1B, [RH, Score=374, Expect=7e-133]; ENSMUSG00000043131, Mob1a, MOB kinase activator 1A, [RH, Score=371, Expect=1e-131]} {Dmel: FBgn0038965, mats, mob as tumor suppressor, [RH, Score=368, Expect=1e-130]} {Celegans: WBGene00020447, mob-3, [Score=223, Expect=3e-73]} {Smed: dd_Smed_v6_6548_0_1, dd_Smed_v6_6548_0_1, [RH, Score=370, Expect=3e-131]} {RNA1509_17457, RNA1509_35281, RNA1509_9427} {RNA1310_36797, RNA1509_17457, RNA1509_35281, RNA1509_9427} {RNA1509_17457, RNA1509_35281, RNA1509_9427, RNA815_14863}
12. MligTC455_51044 1211 25.23 Mlig455_008767, Mlig455_008799

Neo: -

Age: -

OSBPL11 0.959 - - 0.959 - - -

Mlig455_008767 {REF} {Length: 4082} {Pfam: Oxysterol-binding protein [PF01237.20, score=264.7]; PH domain [PF00169.31, score=36.2]; Pleckstrin homology domain [PF15409.8, score=31.3]} {Human: ENSG00000144909, OSBPL11, oxysterol binding protein like 11, [RH, Score=435, Expect=1e-138]; ENSG00000144645, OSBPL10, oxysterol binding protein like 10, [RH, Score=425, Expect=2e-135]} {Mouse: ENSMUSG00000022807, Osbpl11, oxysterol binding protein-like 11, [RH, Score=434, Expect=3e-138]; ENSMUSG00000040875, Osbpl10, oxysterol binding protein-like 10, [RH, Score=425, Expect=8e-137]} {Dmel: FBgn0033463, CG1513, [Score=358, Expect=3e-113]} {Celegans: WBGene00016331, obr-4, Oxysterol-binding protein, [Score=316, Expect=2e-98]} {Smed: dd_Smed_v6_7299_0_1, dd_Smed_v6_7299_0_1, [RH, Score=382, Expect=9e-119]} {RNA1509_10614, RNA1509_25738} {RNA1310_3960.1, RNA1509_25738} {RNA1509_25738, RNA815_2691}

Mlig455_008799 {REF} {Length: 220} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38576} {RNA1310_3960.1} {RNA815_27097}
13. MligTC455_52190 488 10.17 Mlig455_065357

Neo: Int S/G2/M

Age: -

SMNDC1 0.959 - - - 0.959 - - Mlig455_065357 {REF} {Length: 1981} {Pfam: Survival motor neuron protein (SMN) [PF06003.14, score=39.2]} {Human: ENSG00000119953, SMNDC1, survival motor neuron domain containing 1, [RH, Score=123, Expect=1e-33]} {Mouse: ENSMUSG00000025024, Smndc1, survival motor neuron domain containing 1, [RH, Score=123, Expect=9e-34]} {Dmel: FBgn0039977, CG17454, [RH, Score=110, Expect=7e-29]} {Celegans: WBGene00004891, smr-1, SMN (Survival of Motor Neuron protein) Related, [RH, Score=59.7, Expect=2e-10]} {Smed: dd_Smed_v6_5356_0_1, dd_Smed_v6_5356_0_1, [RH, Score=79.0, Expect=5e-18]} {RNA1509_22547, RNA1509_54494} {RNA1310_19986, RNA1509_22547, RNA1509_54494} {RNA1509_22547, RNA1509_54494, RNA815_8484.1}
14. MligTC455_37797 1708 35.59 Mlig455_052264, Mlig455_052350

Neo: Neoblast, stringent

Age: logFC(26M/2M)=-0.294

Regeneration-enriched BL: 1.878
Regeneration-enriched R6: 1.533

LRWD1 0.957 - - - 0.957 - -

Mlig455_052264 {REF} {Length: 5281} {TRANSSPLICED} {Pfam: NAB conserved region 2 (NCD2) [PF04905.15, score=67.7]; Leucine rich repeat [PF13855.8, score=30.0]; WD domain, G-beta repeat [PF00400.34, score=24.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.5]} {Human: ENSG00000161036, LRWD1, leucine rich repeats and WD repeat domain containing 1, [RH, Score=206, Expect=3e-55]} {Mouse: ENSMUSG00000029703, Lrwd1, leucine-rich repeats and WD repeat domain containing 1, [RH, Score=211, Expect=6e-57]} {Dmel: FBgn0032391, escl, [Score=57.8, Expect=6e-08]} {Celegans: WBGene00003107, mab-10, [RH, Score=55.1, Expect=4e-07]} {Smed: dd_Smed_v6_2942_0_1, dd_Smed_v6_2942_0_1, [RH, Score=437, Expect=3e-127]} {RNA1509_1906} {RNA1310_947} {RNA815_870}

Mlig455_052350 {REF} {Length: 5956} {TRANSSPLICED} {Pfam: NAB conserved region 2 (NCD2) [PF04905.15, score=67.8]; Leucine rich repeat [PF13855.8, score=30.0]; WD domain, G-beta repeat [PF00400.34, score=24.3]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.5]} {Human: ENSG00000161036, LRWD1, leucine rich repeats and WD repeat domain containing 1, [RH, Score=206, Expect=3e-55]} {Mouse: ENSMUSG00000029703, Lrwd1, leucine-rich repeats and WD repeat domain containing 1, [RH, Score=211, Expect=6e-57]} {Dmel: FBgn0032391, escl, [Score=57.8, Expect=6e-08]} {Celegans: WBGene00003107, mab-10, [RH, Score=55.1, Expect=4e-07]} {Smed: dd_Smed_v6_2942_0_1, dd_Smed_v6_2942_0_1, [RH, Score=437, Expect=3e-127]} {RNA1509_1906} {RNA1310_947, RNA1509_1906} {RNA1509_1906, RNA815_870}
15. MligTC455_25114 1549 32.27 Mlig455_024420

Neo: -

Age: Down-Down-Up

0.955 - - - 0.955 - - Mlig455_024420 {REF} {Length: 1960} {TRANSSPLICED} {RNA1509_9338} {RNA1310_11932} {RNA815_13318}
16. MligTC455_25115 2895 60.32 Mlig455_024538, Mlig455_024574

Neo: Int S/G2/M

Age: -

BAK1 0.954 - - - 0.954 - -

Mlig455_024538 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=101.2]} {Human: ENSG00000030110, BAK1, BCL2 antagonist/killer 1, [RH, Score=138, Expect=7e-40]} {Mouse: ENSMUSG00000057789, Bak1, BCL2-antagonist/killer 1, [RH, Score=132, Expect=1e-37]} {Smed: dd_Smed_v6_2886_0_1, dd_Smed_v6_2886_0_1, [RH, Score=77.4, Expect=3e-17]} {RNA1509_9338} {RNA1310_11932, RNA1509_9338} {RNA1509_9338, RNA815_13318}

Mlig455_024574 {REF} {Length: 1962} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=101.3]} {Human: ENSG00000030110, BAK1, BCL2 antagonist/killer 1, [RH, Score=138, Expect=5e-40]} {Mouse: ENSMUSG00000057789, Bak1, BCL2-antagonist/killer 1, [RH, Score=133, Expect=4e-38]} {Smed: dd_Smed_v6_2886_0_1, dd_Smed_v6_2886_0_1, [RH, Score=78.2, Expect=2e-17]} {RNA1509_35879, RNA1509_56904, RNA1509_7089, RNA1509_9338} {RNA1310_11932, RNA1509_35879, RNA1509_56904, RNA1509_7089} {RNA1509_35879, RNA1509_56904, RNA1509_7089, RNA815_13318}
17. MligTC455_45874 2616 54.5 Mlig455_025351, Mlig455_025395

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.206/0.01823

Regeneration-enriched BL: 2.077
Regeneration-enriched R6: 1.475

DHX15 0.954 - - - 0.954 - -

Mlig455_025351 {REF} {Length: 3219} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=76.1]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=54.1]; Helicase conserved C-terminal domain [PF00271.33, score=44.9]; DEAD/DEAH box helicase [PF00270.31, score=32.8]; AAA domain [PF13245.8, score=20.0]; AAA domain [PF13401.8, score=18.9]} {Human: ENSG00000109606, DHX15, DEAH-box helicase 15, [Score=1049, Expect=0.0]} {Mouse: ENSMUSG00000029169, Dhx15, DEAH (Asp-Glu-Ala-His) box polypeptide 15, [Score=1036, Expect=0.0]} {Dmel: FBgn0033160, Dhx15, DEAH-box helicase 15, [Score=1030, Expect=0.0]} {Celegans: WBGene00018967, ddx-15, Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15, [Score=941, Expect=0.0]} {Smed: dd_Smed_v6_2043_0_1, dd_Smed_v6_2043_0_1, [Score=1092, Expect=0.0]} {RNA1509_2301} {RNA1310_4345.1} {RNA815_408.1}

Mlig455_025395 {REF} {Length: 2952} {TRANSSPLICED} {Pfam: Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=82.3]; Helicase associated domain (HA2) [PF04408.25, score=80.5]; Helicase conserved C-terminal domain [PF00271.33, score=44.8]; DEAD/DEAH box helicase [PF00270.31, score=32.7]; AAA domain [PF13245.8, score=20.0]; AAA domain [PF13401.8, score=18.8]} {Human: ENSG00000109606, DHX15, DEAH-box helicase 15, [RH, Score=1192, Expect=0.0]} {Mouse: ENSMUSG00000029169, Dhx15, DEAH (Asp-Glu-Ala-His) box polypeptide 15, [RH, Score=1191, Expect=0.0]} {Dmel: FBgn0033160, Dhx15, DEAH-box helicase 15, [RH, Score=1186, Expect=0.0]} {Celegans: WBGene00018967, ddx-15, Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15, [RH, Score=1094, Expect=0.0]} {Smed: dd_Smed_v6_2043_0_1, dd_Smed_v6_2043_0_1, [RH, Score=1235, Expect=0.0]} {RNA1509_2301} {RNA1310_4345.2} {RNA815_408.2}
18. MligTC455_29079 497 10.35 Mlig455_009156

Neo: -

Age: logFC(26M/2M)=0.687

0.952 - - - - 0.952 - Mlig455_009156 {REF} {Length: 1357} {NoTransDecoderORF} {RNA1509_25445} {RNA1310_20024} {RNA815_16485.1}
19. MligTC455_46540 1149 23.94 Mlig455_050917, Mlig455_067796

Neo: -

Age: -

TMEM167B 0.951 - - - - 0.951 -

Mlig455_050917 {REF} {Length: 1496} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1242) [PF06842.14, score=38.7]} {Human: ENSG00000215717, TMEM167B, transmembrane protein 167B, [RH, Score=114, Expect=7e-35]} {Mouse: ENSMUSG00000068732, Tmem167b, transmembrane protein 167B, [RH, Score=114, Expect=5e-35]} {Dmel: FBgn0040890, ksh, kish, [Score=42.4, Expect=9e-07]} {Celegans: WBGene00010639, K07F5.15, [RH, Score=100, Expect=6e-30]} {Smed: dd_Smed_v6_5363_0_1, dd_Smed_v6_5363_0_1, [RH, Score=100, Expect=8e-30]} {RNA1509_34736} {RNA1310_39136, RNA1509_34736} {RNA1509_34736, RNA815_39366}

Mlig455_067796 {REF} {Length: 1661} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1242) [PF06842.14, score=38.7]} {Human: ENSG00000215717, TMEM167B, transmembrane protein 167B, [RH, Score=114, Expect=7e-35]} {Mouse: ENSMUSG00000068732, Tmem167b, transmembrane protein 167B, [RH, Score=114, Expect=5e-35]} {Dmel: FBgn0040890, ksh, kish, [Score=42.4, Expect=9e-07]} {Celegans: WBGene00010639, K07F5.15, [RH, Score=100, Expect=6e-30]} {Smed: dd_Smed_v6_5363_0_1, dd_Smed_v6_5363_0_1, [RH, Score=100, Expect=8e-30]} {RNA1509_10889, RNA1509_24519, RNA1509_24693, RNA1509_33974} {RNA1310_47401, RNA1509_10889, RNA1509_24519, RNA1509_24693, RNA1509_33974} {RNA1509_10889, RNA1509_24519, RNA1509_24693, RNA1509_33974, RNA815_39366}
20. MligTC455_46487 1234 25.71 Mlig455_029960

Neo: -

Age: logFC(26M/2M)=0.223

NSF 0.95 - - - 0.950 - - Mlig455_029960 {REF} {Length: 4492} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=173.9]; AAA+ lid domain [PF17862.3, score=40.3]; AAA ATPase domain [PF13191.8, score=36.8]; AAA domain [PF13401.8, score=36.2]; TIP49 P-loop domain [PF06068.15, score=31.5]; AAA domain [PF13238.8, score=30.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=29.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=28.4]; NACHT domain [PF05729.14, score=28.2]; AAA domain [PF13671.8, score=27.7]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=27.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=24.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=24.1]; AAA domain [PF13173.8, score=22.8]; RNA helicase [PF00910.24, score=22.5]; IstB-like ATP binding protein [PF01695.19, score=22.5]; Cell division protein 48 (CDC48), domain 2 [PF02933.19, score=21.7]; ATPase domain predominantly from Archaea [PF01637.20, score=21.1]; Cell division protein 48 (CDC48), N-terminal domain [PF02359.20, score=20.0]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=19.6]; AAA domain [PF13086.8, score=19.0]} {Human: ENSG00000278174, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=722, Expect=0.0]; ENSG00000276262, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=722, Expect=0.0]; ENSG00000073969, NSF, N-ethylmaleimide sensitive factor, vesicle fusing ATPase, [RH, Score=722, Expect=0.0]} {Mouse: ENSMUSG00000034187, Nsf, N-ethylmaleimide sensitive fusion protein, [RH, Score=723, Expect=0.0]} {Dmel: FBgn0266464, Nsf2, N-ethylmaleimide-sensitive factor 2, [Score=751, Expect=0.0]} {Celegans: WBGene00003818, nsf-1, Vesicle-fusing ATPase, [RH, Score=655, Expect=0.0]} {Smed: dd_Smed_v6_3364_0_1, dd_Smed_v6_3364_0_1, [Score=584, Expect=0.0]} {RNA1509_50177, RNA1509_5245, RNA1509_54471} {RNA1310_9210, RNA1509_50177, RNA1509_5245, RNA1509_54471} {RNA1509_50177, RNA1509_5245, RNA1509_54471, RNA815_3152}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA