Data search


search
Exact
Search

Results for MligTC455_25173

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25173 188 3.91 Mlig455_013841

Neo: -

Age: -

SIRT3 Mlig455_013841 {REF} {Length: 2959} {TRANSSPLICED} {Pfam: Sir2 family [PF02146.19, score=176.2]} {Human: ENSG00000142082, SIRT3, sirtuin 3, [RH, Score=321, Expect=1e-104]} {Mouse: ENSMUSG00000025486, Sirt3, sirtuin 3, [RH, Score=311, Expect=6e-103]} {Dmel: FBgn0038788, Sirt2, Sirtuin 2, [RH, Score=265, Expect=9e-84]} {Celegans: WBGene00004800, sir-2.1, NAD-dependent protein deacetylase sir-2.1, [Score=181, Expect=6e-50]} {Smed: dd_Smed_v6_10955_0_1, dd_Smed_v6_10955_0_1, [RH, Score=332, Expect=3e-108]} {RNA1509_22704, RNA1509_30606} {RNA1310_8223, RNA1509_22704, RNA1509_30606} {RNA1509_22704, RNA1509_30606, RNA815_6025}

Cumulative graph for MligTC455_25173

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.315 2.564 0.84100 1.00000
RegionR2 1.06 2.564 0.19463 0.55179
RegionR3 0.151 2.564 0.78363 1.00000
RegionR4 -1.348 2.564 0.08688 0.27980
RegionR5 -0.01 2.564 0.97118 1.00000
RegionR6 0.117 2.564 0.83891 1.00000
RegionR7 -0.91 2.564 0.37754 1.00000
RegionR8 0.625 2.564 0.53225 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.793 2.564 0.39972 1.00000
RegenerationR2 0.078 2.564 0.90647 1.00000
RegenerationR3 0.468 2.564 0.51053 0.86159
RegenerationR4 0.203 2.564 0.79221 0.98457
RegenerationR5 0.667 2.564 0.28555 0.71397
RegenerationR6 0.391 2.564 0.59960 0.86853
RegenerationBL -0.686 2.564 0.62488 0.96737
RegenerationTP 1.654 2.564 0.08522 0.46162


Genes with expression patterns similar to MligTC455_25173

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25173 188 3.91 Mlig455_013841

Neo: -

Age: -

SIRT3 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_013841 {REF} {Length: 2959} {TRANSSPLICED} {Pfam: Sir2 family [PF02146.19, score=176.2]} {Human: ENSG00000142082, SIRT3, sirtuin 3, [RH, Score=321, Expect=1e-104]} {Mouse: ENSMUSG00000025486, Sirt3, sirtuin 3, [RH, Score=311, Expect=6e-103]} {Dmel: FBgn0038788, Sirt2, Sirtuin 2, [RH, Score=265, Expect=9e-84]} {Celegans: WBGene00004800, sir-2.1, NAD-dependent protein deacetylase sir-2.1, [Score=181, Expect=6e-50]} {Smed: dd_Smed_v6_10955_0_1, dd_Smed_v6_10955_0_1, [RH, Score=332, Expect=3e-108]} {RNA1509_22704, RNA1509_30606} {RNA1310_8223, RNA1509_22704, RNA1509_30606} {RNA1509_22704, RNA1509_30606, RNA815_6025}
2. MligTC455_31301 256 5.34 Mlig455_016506

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R5: 2.171/0.00592

0.966 - - - 0.966 - - Mlig455_016506 {REF} {Length: 2610} {TRANSSPLICED} {RNA1509_45336, RNA1509_46269, RNA1509_50988} {RNA1310_30214, RNA1509_45336, RNA1509_50988} {RNA1509_45336, RNA1509_50988, RNA815_15422}
3. MligTC455_46833 238 4.97 Mlig455_069546

Neo: -

Age: -

0.954 - - - 0.954 - - Mlig455_069546 {REF} {Length: 3955} {RNA1509_41618} {RNA1310_38031} {RNA815_29978}
4. MligTC455_32707 59 1.23 Mlig455_063054

Neo: -

Age: logFC(26M/2M)=0.698

HERC4 0.952 - - - 0.952 - - Mlig455_063054 {REF} {Length: 3681} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=143.6]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=118.8]} {Human: ENSG00000148634, HERC4, HECT and RLD domain containing E3 ubiquitin protein ligase 4, [Score=97.4, Expect=3e-20]} {Mouse: ENSMUSG00000030839, Sergef, secretion regulating guanine nucleotide exchange factor, [RH, Score=105, Expect=1e-23]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=115, Expect=5e-26]} {Celegans: WBGene00017195, glo-4, X-linked retinitis pigmentosa GTPase regulator homolog, [RH, Score=95.5, Expect=5e-20]} {Smed: dd_Smed_v6_16647_0_1, dd_Smed_v6_16647_0_1, [RH, Score=132, Expect=4e-32]} {RNA1509_27199} {RNA1310_3241.1} {RNA815_13346}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA