Data search
Results for MligTC455_46833
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_46833 | 238 | 4.97 | Mlig455_069546 | Neo: - Age: - |
Mlig455_069546 {REF} {Length: 3955} {RNA1509_41618} {RNA1310_38031} {RNA815_29978} |
Cumulative graph for MligTC455_46833
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.481 | 2.718 | 0.03242 | 0.45572 | |
| RegionR2 | 1.4 | 2.718 | 0.16176 | 0.50366 | |
| RegionR3 | 0.539 | 2.718 | 0.56710 | 1.00000 | |
| RegionR4 | -0.787 | 2.718 | 0.97810 | 1.00000 | |
| RegionR5 | 1.721 | 2.718 | 0.00913 | 0.05402 | |
| RegionR6 | 1.675 | 2.718 | 0.02316 | 0.27629 | |
| RegionR7 | 0.633 | 2.718 | 0.54700 | 1.00000 | |
| RegionR8 | 2.301 | 2.718 | 0.00828 | 0.16910 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.483 | 2.718 | 0.99981 | 1.00000 | |
| RegenerationR2 | -0.516 | 2.718 | 0.40092 | 0.81481 | |
| RegenerationR3 | 0.681 | 2.718 | 0.31705 | 0.74586 | |
| RegenerationR4 | 0.941 | 2.718 | 0.17983 | 0.62014 | |
| RegenerationR5 | -0.051 | 2.718 | 0.94210 | 1.00000 | |
| RegenerationR6 | -0.999 | 2.718 | 0.16770 | 0.49828 | |
| RegenerationBL | -0.881 | 2.718 | 0.33139 | 0.69788 | |
| RegenerationTP | 0.033 | 2.718 | 0.95193 | 1.00000 |
Genes with expression patterns similar to MligTC455_46833
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_46833 | 238 | 4.97 | Mlig455_069546 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069546 {REF} {Length: 3955} {RNA1509_41618} {RNA1310_38031} {RNA815_29978} | |
| 2. | MligTC455_15556 | 103 | 2.14 | Mlig455_046171 | Neo: - Age: - Region-enriched R5: 3.292/0.00059 |
1.792 | 0.819 | - | - | 0.973 | - | - | Mlig455_046171 {REF} {Length: 2165} {TRANSSPLICED} {RNA1509_37300} {RNA1310_15647.1} {RNA815_18831.1} | |
| 3. | MligTC455_40383 | 109 | 2.26 | Mlig455_029910 | Neo: - Age: Down-Up-Down |
KCNJ6 | 1.666 | - | - | 0.706 | 0.960 | - | - | Mlig455_029910 {REF} {Length: 2408} {Pfam: Inward rectifier potassium channel C-terminal domain [PF17655.3, score=197.5]; Inward rectifier potassium channel transmembrane domain [PF01007.22, score=151.5]} {Human: ENSG00000157542, KCNJ6, potassium voltage-gated channel subfamily J member 6, [Score=292, Expect=2e-95]; ENSG00000120457, KCNJ5, potassium voltage-gated channel subfamily J member 5, [Score=283, Expect=5e-92]} {Mouse: ENSMUSG00000043301, Kcnj6, potassium inwardly-rectifying channel, subfamily J, member 6, [Score=292, Expect=1e-95]; ENSMUSG00000032034, Kcnj5, potassium inwardly-rectifying channel, subfamily J, member 5, [Score=286, Expect=5e-93]} {Dmel: FBgn0265042, Irk1, Inwardly rectifying potassium channel 1, [Score=311, Expect=7e-102]} {Celegans: WBGene00002150, irk-2, Inward Rectifying K (Potassium) channel family, [Score=288, Expect=1e-93]} {RNA1509_24029} {RNA1310_21512, RNA1509_24029} {RNA1509_24029, RNA815_10398} |
| 4. | MligTC455_31301 | 256 | 5.34 | Mlig455_016506 | Neo: Irradiation Age: Down-Up-Up Region-enriched R5: 2.171/0.00592 |
0.982 | - | - | - | 0.982 | - | - | Mlig455_016506 {REF} {Length: 2610} {TRANSSPLICED} {RNA1509_45336, RNA1509_46269, RNA1509_50988} {RNA1310_30214, RNA1509_45336, RNA1509_50988} {RNA1509_45336, RNA1509_50988, RNA815_15422} | |
| 5. | MligTC455_53865 | 194 | 4.05 | Mlig455_063530 | Neo: - Age: - |
0.976 | - | - | - | 0.976 | - | - | Mlig455_063530 {REF} {Length: 8537} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=24.6]} {Mouse: ENSMUSG00000035517, Tdrd7, tudor domain containing 7, [RH, Score=67.0, Expect=5e-11]} {RNA1509_17754, RNA1509_29299} {RNA1310_1487, RNA1509_17754} {RNA1509_17754, RNA815_6982} | |
| 6. | MligTC455_53062 | 454 | 9.46 | Mlig455_068264 | Neo: - Age: - Region-enriched R4: 1.490/0.04236 |
SPTLC2 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_068264 {REF} {Length: 3539} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=167.6]; Beta-eliminating lyase [PF01212.23, score=18.6]} {Human: ENSG00000100596, SPTLC2, serine palmitoyltransferase long chain base subunit 2, [RH, Score=594, Expect=0.0]; ENSG00000172296, SPTLC3, serine palmitoyltransferase long chain base subunit 3, [RH, Score=568, Expect=0.0]} {Mouse: ENSMUSG00000021036, Sptlc2, serine palmitoyltransferase, long chain base subunit 2, [RH, Score=600, Expect=0.0]} {Dmel: FBgn0002524, lace, [RH, Score=497, Expect=3e-171]} {Celegans: WBGene00018398, sptl-2, Serine palmitoyltransferase 2, [RH, Score=504, Expect=7e-175]} {Smed: dd_Smed_v6_4337_0_1, dd_Smed_v6_4337_0_1, [RH, Score=612, Expect=0.0]} {RNA1509_16682, RNA1509_56205} {RNA1310_11412.1, RNA1509_56205} {RNA1509_56205, RNA815_4113} |
| 7. | MligTC455_18167 | 64 | 1.33 | Mlig455_070366 | Neo: - Age: Down-Up-Down |
CUEDC2 | 0.965 | - | - | - | 0.965 | - | - | Mlig455_070366 {REF} {Length: 1638} {TRANSSPLICED} {Human: ENSG00000107874, CUEDC2, CUE domain containing 2, [RH, Score=84.7, Expect=2e-18]} {Mouse: ENSMUSG00000036748, Cuedc2, CUE domain containing 2, [RH, Score=82.4, Expect=1e-17]} {RNA1509_27699} {RNA1310_20074} {RNA815_20790} |
| 8. | MligTC455_09281 | 272 | 5.66 | Mlig455_063308 | Neo: - Age: - |
0.956 | - | - | - | - | - | 0.956 | Mlig455_063308 {REF} {Length: 1383} {RNA1509_43304} {RNA1310_30796.1} {RNA815_17805} | |
| 9. | MligTC455_52414 | 166 | 3.45 | Mlig455_002593 | Neo: - Age: Up-Down-Down |
0.955 | - | - | - | 0.955 | - | - | Mlig455_002593 {REF} {Length: 2578} {RNA1509_42741} {RNA1310_20005.1, RNA1509_42741} {RNA1509_42741, RNA815_31480} | |
| 10. | MligTC455_25173 | 188 | 3.91 | Mlig455_013841 | Neo: - Age: - |
SIRT3 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_013841 {REF} {Length: 2959} {TRANSSPLICED} {Pfam: Sir2 family [PF02146.19, score=176.2]} {Human: ENSG00000142082, SIRT3, sirtuin 3, [RH, Score=321, Expect=1e-104]} {Mouse: ENSMUSG00000025486, Sirt3, sirtuin 3, [RH, Score=311, Expect=6e-103]} {Dmel: FBgn0038788, Sirt2, Sirtuin 2, [RH, Score=265, Expect=9e-84]} {Celegans: WBGene00004800, sir-2.1, NAD-dependent protein deacetylase sir-2.1, [Score=181, Expect=6e-50]} {Smed: dd_Smed_v6_10955_0_1, dd_Smed_v6_10955_0_1, [RH, Score=332, Expect=3e-108]} {RNA1509_22704, RNA1509_30606} {RNA1310_8223, RNA1509_22704, RNA1509_30606} {RNA1509_22704, RNA1509_30606, RNA815_6025} |
| 11. | MligTC455_15754 | 303 | 6.32 | Mlig455_020241 | Neo: Irradiation Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_020241 {REF} {Length: 1834} {TRANSSPLICED} {Pfam: N-terminal C2 in EEIG1 and EHBP1 proteins [PF10358.11, score=22.6]} {Dmel: FBgn0032938, CG8671, [Score=103, Expect=4e-24]} {Celegans: WBGene00006368, sym-3, SYM-3B, [Score=73.2, Expect=1e-15]} {Smed: dd_Smed_v6_5362_0_1, dd_Smed_v6_5362_0_1, [Score=80.9, Expect=5e-17]} {RNA1509_13240} {RNA1310_14164.1, RNA1509_13240} {RNA1509_13240, RNA815_7991.1} | |
| 12. | MligTC455_20218 | 397 | 8.26 | Mlig455_035684 | Neo: - Age: - |
SMAP1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_035684 {REF} {Length: 3404} {TRANSSPLICED} {Pfam: Putative GTPase activating protein for Arf [PF01412.20, score=134.1]} {Human: ENSG00000112305, SMAP1, small ArfGAP 1, [RH, Score=178, Expect=5e-50]; ENSG00000084070, SMAP2, small ArfGAP2, [RH, Score=178, Expect=5e-50]} {Mouse: ENSMUSG00000032870, Smap2, small ArfGAP 2, [RH, Score=178, Expect=3e-50]; ENSMUSG00000026155, Smap1, small ArfGAP 1, [RH, Score=176, Expect=2e-49]} {Dmel: FBgn0033349, CG8243, [RH, Score=218, Expect=8e-65]} {Celegans: WBGene00012359, W09D10.1, [RH, Score=196, Expect=1e-56]} {Smed: dd_Smed_v6_2542_0_1, dd_Smed_v6_2542_0_1, [RH, Score=226, Expect=3e-69]} {RNA1509_10562, RNA1509_43139, RNA1509_49488} {RNA1310_2172.1, RNA1509_10562, RNA1509_43139, RNA1509_49488} {RNA1509_10562, RNA1509_43139, RNA1509_49488, RNA815_11714.1} |
| 13. | MligTC455_22180 | 88 | 1.84 | Mlig455_006898 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_006898 {REF} {Length: 5800} {RNA1509_12420} {RNA1310_87510} {RNA815_50698} | |
| 14. | MligTC455_05897 | 665 | 13.85 | Mlig455_049059 | Neo: - Age: - |
LNX2 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_049059 {REF} {Length: 6005} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=182.6]; PDZ domain [PF17820.3, score=100.7]; PDZ domain [PF13180.8, score=57.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.9]; RING-type zinc-finger [PF13445.8, score=27.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=27.1]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=25.9]; TRAF-type zinc finger [PF02176.20, score=25.1]; zinc-RING finger domain [PF14634.8, score=22.9]; Ring finger domain [PF13639.8, score=22.5]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.1]} {Human: ENSG00000139517, LNX2, ligand of numb-protein X 2, [Score=427, Expect=2e-138]} {Mouse: ENSMUSG00000016520, Lnx2, ligand of numb-protein X 2, [Score=416, Expect=3e-134]} {Dmel: FBgn0000008, a, arc, [RH, Score=70.9, Expect=4e-12]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=155, Expect=3e-40]} {Smed: dd_Smed_v6_8994_0_2, dd_Smed_v6_8994_0_2, [RH, Score=527, Expect=2e-175]} {RNA1509_14988} {RNA1310_9030} {RNA815_6198} |
| 15. | MligTC455_27688 | 559 | 11.65 | Mlig455_020197 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_020197 {REF} {Length: 2249} {TRANSSPLICED} {RNA1509_26921} {RNA1310_13949} {RNA815_20428} | |
| 16. | MligTC455_03187 | 79 | 1.65 | Mlig455_069348 | Neo: Irradiation Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_069348 {REF} {Length: 4498} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=38.4]; Contractile injection system tape measure protein [PF19268.1, score=21.1]} {RNA1509_27943} {RNA1310_17912.1} {RNA815_23339} | |
| 17. | MligTC455_36625 | 368 | 7.67 | Mlig455_017507, Mlig455_017511 | Neo: - Age: - Region-enriched R3: 2.218/0.00379 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_017507 {REF} {Length: 2253} {Dmel: FBgn0032085, CG9555, [RH, Score=57.4, Expect=4e-09]} {RNA1509_15396, RNA1509_28624} {RNA1310_8477, RNA1509_15396} {RNA1509_15396, RNA815_6363} Mlig455_017511 {REF} {Length: 1726} {RNA1509_15396} {RNA1310_8477} {RNA815_6363} |
|
| 18. | MligTC455_46476 | 156 | 3.24 | Mlig455_014754 | Neo: - Age: - |
RBM48 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_014754 {REF} {Length: 1619} {TRANSSPLICED} {Human: ENSG00000127993, RBM48, RNA binding motif protein 48, [RH, Score=127, Expect=4e-33]} {Mouse: ENSMUSG00000040302, Rbm48, RNA binding motif protein 48, [RH, Score=126, Expect=9e-33]} {Dmel: FBgn0085260, CG34231, [RH, Score=96.3, Expect=7e-24]} {Smed: dd_Smed_v6_12188_0_2, dd_Smed_v6_12188_0_2, [RH, Score=144, Expect=3e-41]} {RNA1509_47276} {RNA1310_15680.1} {RNA815_8909.1} |
Berezikov Lab - 2020-2021 © ERIBA