TomoSeq data search

Data search

Results for MligTC455_25272

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25272

586

12.20

Mlig455_035775, Mlig455_035886

Neo: -

Age: -

XPO7

Mlig455_035775 {REF} {Length: 5916} {Pfam: Importin-beta N-terminal domain [PF03810.21, score=22.1]} {Human: ENSG00000130227, XPO7, exportin 7, [RH, Score=1231, Expect=0.0]} {Mouse: ENSMUSG00000022100, Xpo7, exportin 7, [RH, Score=1228, Expect=0.0]} {Dmel: FBgn0053180, Ranbp16, [RH, Score=1074, Expect=0.0]} {Celegans: WBGene00007952, C35A5.8, [RH, Score=783, Expect=0.0]} {Smed: dd_Smed_v6_5566_0_1, dd_Smed_v6_5566_0_1, [RH, Score=729, Expect=0.0]} {RNA1509_6691} {RNA1310_1345.1} {RNA815_775.1}

Mlig455_035886 {REF} {Length: 5703} {TRANSSPLICED} {Pfam: Importin-beta N-terminal domain [PF03810.21, score=22.1]} {Human: ENSG00000130227, XPO7, exportin 7, [RH, Score=1231, Expect=0.0]} {Mouse: ENSMUSG00000022100, Xpo7, exportin 7, [RH, Score=1228, Expect=0.0]} {Dmel: FBgn0053180, Ranbp16, [RH, Score=1074, Expect=0.0]} {Celegans: WBGene00007952, C35A5.8, [RH, Score=783, Expect=0.0]} {Smed: dd_Smed_v6_5566_0_1, dd_Smed_v6_5566_0_1, [RH, Score=729, Expect=0.0]} {RNA1509_45528, RNA1509_48027, RNA1509_6691} {RNA1310_1345.1, RNA1509_45528, RNA1509_48027} {RNA1509_45528, RNA1509_48027, RNA815_775.1}

Cumulative graph for MligTC455_25272

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.314	4.021	0.29081	0.94296
RegionR2	-0.623	4.021	0.23518	0.60866
RegionR3	-0.461	4.021	0.24862	0.79228
RegionR4	1.014	4.021	0.05507	0.20596
RegionR5	0.431	4.021	0.19524	0.48195
RegionR6	-0.346	4.021	0.37563	0.95594
RegionR7	-0.235	4.021	0.64801	1.00000
RegionR8	-1.093	4.021	0.11726	0.63163

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.502	4.021	0.14940	0.88986
RegenerationR2	0.402	4.021	0.33728	0.77273
RegenerationR3	0.122	4.021	0.80191	0.98322
RegenerationR4	-0.363	4.021	0.47014	0.85361
RegenerationR5	0.119	4.021	0.76455	0.97687
RegenerationR6	0.86	4.021	0.06325	0.31582
RegenerationBL	0.456	4.021	0.50244	0.86659
RegenerationTP	0.486	4.021	0.44617	0.86486

Genes with expression patterns similar to MligTC455_25272

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25272	586	12.2	Mlig455_035775, Mlig455_035886	Neo: - Age: -	XPO7	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035775 {REF} {Length: 5916} {Pfam: Importin-beta N-terminal domain [PF03810.21, score=22.1]} {Human: ENSG00000130227, XPO7, exportin 7, [RH, Score=1231, Expect=0.0]} {Mouse: ENSMUSG00000022100, Xpo7, exportin 7, [RH, Score=1228, Expect=0.0]} {Dmel: FBgn0053180, Ranbp16, [RH, Score=1074, Expect=0.0]} {Celegans: WBGene00007952, C35A5.8, [RH, Score=783, Expect=0.0]} {Smed: dd_Smed_v6_5566_0_1, dd_Smed_v6_5566_0_1, [RH, Score=729, Expect=0.0]} {RNA1509_6691} {RNA1310_1345.1} {RNA815_775.1} Mlig455_035886 {REF} {Length: 5703} {TRANSSPLICED} {Pfam: Importin-beta N-terminal domain [PF03810.21, score=22.1]} {Human: ENSG00000130227, XPO7, exportin 7, [RH, Score=1231, Expect=0.0]} {Mouse: ENSMUSG00000022100, Xpo7, exportin 7, [RH, Score=1228, Expect=0.0]} {Dmel: FBgn0053180, Ranbp16, [RH, Score=1074, Expect=0.0]} {Celegans: WBGene00007952, C35A5.8, [RH, Score=783, Expect=0.0]} {Smed: dd_Smed_v6_5566_0_1, dd_Smed_v6_5566_0_1, [RH, Score=729, Expect=0.0]} {RNA1509_45528, RNA1509_48027, RNA1509_6691} {RNA1310_1345.1, RNA1509_45528, RNA1509_48027} {RNA1509_45528, RNA1509_48027, RNA815_775.1}
2.	MligTC455_20081	395	8.24	Mlig455_030428	Neo: - Age: Down-Down-Up	YEATS4	1.717	-	-	-	0.762	0.955	-	Mlig455_030428 {REF} {Length: 1502} {TRANSSPLICED} {Pfam: YEATS family [PF03366.18, score=105.9]} {Human: ENSG00000127337, YEATS4, YEATS domain containing 4, [RH, Score=195, Expect=2e-62]} {Mouse: ENSMUSG00000020171, Yeats4, YEATS domain containing 4, [RH, Score=195, Expect=1e-62]} {Dmel: FBgn0031873, Gas41, [RH, Score=191, Expect=4e-61]} {Celegans: WBGene00001585, gfl-1, GAS41-Like, [RH, Score=178, Expect=3e-56]} {Smed: dd_Smed_v6_6828_0_1, dd_Smed_v6_6828_0_1, [RH, Score=186, Expect=4e-59]} {RNA1509_24299, RNA1509_34783} {RNA1310_24422, RNA1509_24299} {RNA1509_24299, RNA815_21390}
3.	MligTC455_30395	108	2.25	Mlig455_070650	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.875	ALDH18A1	1.685	-	-	-	0.729	0.956	-	Mlig455_070650 {REF} {Length: 3857} {Pfam: Amino acid kinase family [PF00696.30, score=138.7]; Aldehyde dehydrogenase family [PF00171.24, score=57.0]} {Human: ENSG00000059573, ALDH18A1, aldehyde dehydrogenase 18 family member A1, [RH, Score=852, Expect=0.0]} {Mouse: ENSMUSG00000025007, Aldh18a1, aldehyde dehydrogenase 18 family, member A1, [RH, Score=857, Expect=0.0]} {Dmel: FBgn0037146, CG7470, [RH, Score=815, Expect=0.0]} {Celegans: WBGene00011938, alh-13, Probable delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase, [RH, Score=811, Expect=0.0]} {Smed: dd_Smed_v6_1060_0_1, dd_Smed_v6_1060_0_1, [RH, Score=916, Expect=0.0]} {RNA1509_1671} {RNA1310_2413} {RNA815_1917}
4.	MligTC455_15562	2747	57.23	Mlig455_011151	Neo: - Age: -		1.66	-	0.705	-	-	0.955	-	Mlig455_011151 {REF} {Length: 1349} {TRANSSPLICED} {RNA1509_22227} {RNA1310_25296} {RNA815_16722}
5.	MligTC455_15563	2750	57.29	Mlig455_050862	Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.404	CSTF2	1.659	-	0.705	-	-	0.954	-	Mlig455_050862 {REF} {Length: 1346} {TRANSSPLICED} {Pfam: Hinge domain of cleavage stimulation factor subunit 2 [PF14327.8, score=101.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=77.0]; Transcription termination and cleavage factor C-terminal [PF14304.8, score=68.6]} {Human: ENSG00000101811, CSTF2, cleavage stimulation factor subunit 2, [RH, Score=263, Expect=5e-82]; ENSG00000177613, CSTF2T, cleavage stimulation factor subunit 2 tau variant, [RH, Score=256, Expect=2e-79]} {Mouse: ENSMUSG00000031256, Cstf2, cleavage stimulation factor, 3' pre-RNA subunit 2, [RH, Score=263, Expect=1e-82]; ENSMUSG00000053536, Cstf2t, cleavage stimulation factor, 3' pre-RNA subunit 2, tau, [RH, Score=255, Expect=4e-79]} {Dmel: FBgn0027841, CstF64, Cleavage stimulation factor 64 kD subunit, [RH, Score=235, Expect=7e-74]} {Celegans: WBGene00000774, cpf-2, Cleavage and Polyadenylation Factor, [RH, Score=207, Expect=5e-64]} {Smed: dd_Smed_v6_3081_0_1, dd_Smed_v6_3081_0_1, [RH, Score=322, Expect=2e-108]} {RNA1509_22227, RNA1509_50706, RNA1509_53963} {RNA1310_25296, RNA1509_22227, RNA1509_50706, RNA1509_53963} {RNA1509_22227, RNA1509_50706, RNA1509_53963, RNA815_16722}
6.	MligTC455_50758	178	3.71	Mlig455_002573	Neo: - Age: - Region-enriched R4: 4.652/0.01816	QRSL1	0.964	-	-	-	-	0.964	-	Mlig455_002573 {REF} {Length: 3723} {Pfam: Amidase [PF01425.23, score=276.4]} {Human: ENSG00000130348, QRSL1, QRSL1, glutaminyl-tRNA amidotransferase subunit A, [Score=114, Expect=4e-26]} {Mouse: ENSMUSG00000019863, Qrsl1, glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1, [Score=104, Expect=4e-23]} {Dmel: FBgn0260779, GatA, Glutamyl-tRNA amidotransferase, subunit A, [Score=123, Expect=2e-29]} {Celegans: WBGene00021508, Y41D4A.6, Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial, [Score=105, Expect=1e-23]} {Smed: dd_Smed_v6_12029_0_1, dd_Smed_v6_12029_0_1, [Score=129, Expect=1e-31]} {RNA1509_20712, RNA1509_29040, RNA1509_31614} {RNA1310_9763.2, RNA1509_29040, RNA1509_31614} {RNA1509_29040, RNA1509_31614, RNA815_12009}
7.	MligTC455_52026	1687	35.15	Mlig455_004669, Mlig455_004733, Mlig455_004832	Neo: - Age: logFC(26M/2M)=0.290 Region-enriched R5: 1.467/0.04312		0.958	-	-	-	-	0.958	-	Mlig455_004669 {REF} {Length: 1728} {RNA1509_23759} {RNA1310_39844} {RNA815_18443.1} Mlig455_004733 {REF} {Length: 2712} {RNA1509_23759, RNA1509_38591, RNA1509_46380} {RNA1310_39844, RNA1509_23759, RNA1509_38591, RNA1509_46380} {RNA1509_23759, RNA1509_38591, RNA1509_46380, RNA815_18443.1} Mlig455_004832 {REF} {Length: 1806} {RNA1509_23759, RNA1509_55627} {RNA1310_39844, RNA1509_55627} {RNA1509_55627, RNA815_18443.1}
8.	MligTC455_04063	117	2.44	Mlig455_008220	Neo: Int S/G2/M Age: - Region-enriched R5: 2.135/0.01680	TOMM40	0.957	-	-	-	-	0.957	-	Mlig455_008220 {REF} {Length: 2690} {TRANSSPLICED} {Pfam: Eukaryotic porin [PF01459.24, score=167.0]} {Human: ENSG00000130204, TOMM40, translocase of outer mitochondrial membrane 40, [RH, Score=181, Expect=2e-53]} {Mouse: ENSMUSG00000002984, Tomm40, translocase of outer mitochondrial membrane 40, [RH, Score=178, Expect=3e-52]} {Dmel: FBgn0016041, Tom40, Translocase of outer membrane 40, [RH, Score=229, Expect=3e-72]} {Celegans: WBGene00007686, tomm-40, Mitochondrial import receptor subunit TOM40 homolog, [RH, Score=194, Expect=1e-59]} {Smed: dd_Smed_v6_4005_0_1, dd_Smed_v6_4005_0_1, [RH, Score=200, Expect=2e-61]} {RNA1509_20037, RNA1509_50837} {RNA1310_22195, RNA1509_20037, RNA1509_50837} {RNA1509_20037, RNA1509_50837, RNA815_8897}
9.	MligTC455_11865	160	3.33	Mlig455_037642, Mlig455_069907	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-1.621		0.951	-	-	-	-	0.951	-	Mlig455_037642 {REF} {Length: 3499} {Pfam: Glycine rich protein [PF12810.9, score=31.7]} {Smed: dd_Smed_v6_12148_0_3, dd_Smed_v6_12148_0_3, [Score=67.4, Expect=2e-12]} {RNA1310_19265.2} {RNA815_13143} Mlig455_069907 {REF} {Length: 4084} {RNA1310_19265.2} {RNA815_13143}
10.	MligTC455_41857	148	3.08	Mlig455_037828	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.788	BRD8	0.951	-	-	-	0.951	-	-	Mlig455_037828 {REF} {Length: 2010} {TRANSSPLICED} {Pfam: Bromodomain [PF00439.27, score=33.1]} {Human: ENSG00000112983, BRD8, bromodomain containing 8, [Score=69.3, Expect=9e-12]} {Mouse: ENSMUSG00000003778, Brd8, bromodomain containing 8, [Score=69.3, Expect=7e-12]} {Dmel: FBgn0050417, tbrd-3, testis-specifically expressed bromodomain containing protein-3, [Score=47.8, Expect=1e-05]} {Smed: dd_Smed_v6_10362_1_1, dd_Smed_v6_10362_1_1, [RH, Score=57.0, Expect=1e-08]} {RNA1509_27181} {RNA1310_17527} {RNA815_26572}

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