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Results for MligTC455_25278

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25278 23 0.48 Mlig455_040680

Neo: -

Age: Down-Up-Down

 RPGR Mlig455_040680 {REF} {Length: 4301} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=192.8]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=127.5]; Family of unknown function (DUF6476) [PF20082.1, score=19.4]} {Human: ENSG00000156313, RPGR, retinitis pigmentosa GTPase regulator, [RH, Score=229, Expect=7e-66]} {Mouse: ENSMUSG00000031174, Rpgr, retinitis pigmentosa GTPase regulator, [Score=235, Expect=2e-64]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=143, Expect=1e-34]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_2716_1_1, dd_Smed_v6_2716_1_1, [RH, Score=219, Expect=1e-61]} {RNA1509_14742} {RNA1310_2996} {RNA815_7565}

Cumulative graph for MligTC455_25278

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.348 1.128 1.00000 1.00000
RegionR2 2.01 1.128 0.20858 0.57181
RegionR3 1.408 1.128 0.28186 0.82541
RegionR4 2.315 1.128 0.12948 0.36385
RegionR5 1.29 1.128 0.28697 0.61769
RegionR6 -0.926 1.128 0.88879 1.00000
RegionR7 -2.388 1.128 0.99973 1.00000
RegionR8 -2.361 1.128 0.99975 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.234 1.128 0.99996 1.00000
RegenerationR2 -1.533 1.128 0.13416 0.56097
RegenerationR3 0.951 1.128 0.38599 0.79369
RegenerationR4 -0.426 1.128 0.70613 0.95560
RegenerationR5 0.439 1.128 0.64717 0.93103
RegenerationR6 0.93 1.128 0.60189 0.86961
RegenerationBL 2.327 1.128 0.34848 0.71570
RegenerationTP 3.008 1.128 0.28889 0.73453


Genes with expression patterns similar to MligTC455_25278

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25278 23 0.48 Mlig455_040680

Neo: -

Age: Down-Up-Down

 RPGR 4 - 1.000 1.000 - 1.000 1.000 Mlig455_040680 {REF} {Length: 4301} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=192.8]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=127.5]; Family of unknown function (DUF6476) [PF20082.1, score=19.4]} {Human: ENSG00000156313, RPGR, retinitis pigmentosa GTPase regulator, [RH, Score=229, Expect=7e-66]} {Mouse: ENSMUSG00000031174, Rpgr, retinitis pigmentosa GTPase regulator, [Score=235, Expect=2e-64]} {Dmel: FBgn0035207, Sherpa, SUMO-related HECT domain and RCC repeat protein for Toll pathway activation, [Score=143, Expect=1e-34]} {Celegans: WBGene00021685, herc-1, HECT and RCC domain E3 ubiquitin ligase, [Score=107, Expect=1e-23]} {Smed: dd_Smed_v6_2716_1_1, dd_Smed_v6_2716_1_1, [RH, Score=219, Expect=1e-61]} {RNA1509_14742} {RNA1310_2996} {RNA815_7565}
2. MligTC455_22402 31 0.64 Mlig455_012784

Neo: -

Age: -

 1 - - 1.000 - - - Mlig455_012784 {REF} {Length: 1963} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.6]} {Smed: dd_Smed_v6_43697_0_1, dd_Smed_v6_43697_0_1, [Score=84.3, Expect=4e-19]} {RNA1310_96760.2} {RNA815_54296}
3. MligTC455_44658 12 0.25 Mlig455_054317

Neo: -

Age: -

 1 - - 1.000 - - - Mlig455_054317 {REF} {Length: 2882} {Pfam: PDZ domain [PF17820.3, score=33.0]; PDZ domain [PF00595.26, score=32.9]} {RNA1310_148560}
4. MligTC455_13202 175 3.65 Mlig455_066195, Mlig455_068828

Neo: -

Age: Down-Down-Up

 MYO19 0.99 - - 0.990 - - -

Mlig455_066195 {REF} {Length: 3624} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=293.0]} {Human: ENSG00000278372, MYO19, myosin XIX, [Score=248, Expect=9e-69]; ENSG00000278259, MYO19, myosin XIX, [Score=248, Expect=9e-69]} {Mouse: ENSMUSG00000020527, Myo19, myosin XIX, [Score=241, Expect=2e-66]} {Dmel: FBgn0000317, ck, crinkled, [Score=221, Expect=3e-59]} {Celegans: WBGene00002035, hum-1, Heavy chain, Unconventional Myosin, [Score=211, Expect=3e-56]} {Smed: dd_Smed_v6_5823_0_1, dd_Smed_v6_5823_0_1, [Score=211, Expect=3e-56]} {RNA1509_37477} {RNA1310_5400.2} {RNA815_4327}

Mlig455_068828 {REF} {Length: 3375} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=322.9]} {Human: ENSG00000278259, MYO19, myosin XIX, [Score=263, Expect=8e-74]; ENSG00000278372, MYO19, myosin XIX, [Score=263, Expect=8e-74]} {Mouse: ENSMUSG00000020527, Myo19, myosin XIX, [Score=255, Expect=3e-71]} {Dmel: FBgn0000317, ck, crinkled, [Score=236, Expect=7e-64]} {Celegans: WBGene00009730, myo-6, MYOsin heavy chain structural genes, [Score=228, Expect=1e-61]} {Smed: dd_Smed_v6_5823_0_1, dd_Smed_v6_5823_0_1, [Score=226, Expect=9e-61]} {RNA1509_37477} {RNA1310_5400.2} {RNA815_4327}
5. MligTC455_18425 65 1.35 Mlig455_070253

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.582

 0.99 - - 0.990 - - - Mlig455_070253 {REF} {Length: 1630} {RNA1509_32615} {RNA1310_20631.1} {RNA815_8350}
6. MligTC455_02535 17 0.35 Mlig455_049210

Neo: -

Age: -

Regeneration-enriched R3: 10.246
Regeneration-enriched R4: 9.811
Regeneration-enriched R5: 7.828

 0.969 - - - - 0.969 - Mlig455_049210 {REF} {Length: 601} {NoTransDecoderORF} {RNA1509_39265} {RNA1310_48857}
7. MligTC455_40406 59 1.23 Mlig455_062481

Neo: -

Age: -

 CHRNA9 0.969 - - 0.969 - - - Mlig455_062481 {REF} {Length: 3660} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=153.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=111.8]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=205, Expect=2e-59]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=1e-57]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=201, Expect=7e-58]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=2e-57]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=1e-57]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=199, Expect=2e-57]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=199, Expect=4e-57]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=196, Expect=1e-54]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=209, Expect=4e-61]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=207, Expect=7e-60]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=200, Expect=6e-58]} {Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=202, Expect=2e-58]} {Celegans: WBGene00000050, acr-11, AcetylCholine Receptor, [Score=192, Expect=7e-55]} {Smed: dd_Smed_v6_9503_0_1, dd_Smed_v6_9503_0_1, [RH, Score=449, Expect=5e-153]} {RNA1509_18288} {RNA1310_3728, RNA1509_18288} {RNA1509_18288, RNA815_3826.3}
8. MligTC455_27468 40 0.84 Mlig455_013749

Neo: -

Age: -

 LNPEP 0.968 - - 0.968 - - - Mlig455_013749 {REF} {Length: 4937} {Pfam: Peptidase family M1 domain [PF01433.22, score=195.1]; Peptidase M1 N-terminal domain [PF17900.3, score=121.7]} {Human: ENSG00000113441, LNPEP, leucyl and cystinyl aminopeptidase, [Score=289, Expect=5e-85]; ENSG00000172901, LVRN, laeverin, [Score=282, Expect=1e-82]; ENSG00000166825, ANPEP, alanyl aminopeptidase, membrane, [Score=277, Expect=4e-81]; ENSG00000164307, ERAP1, endoplasmic reticulum aminopeptidase 1, [Score=275, Expect=3e-80]} {Mouse: ENSMUSG00000023845, Lnpep, leucyl/cystinyl aminopeptidase, [Score=286, Expect=2e-84]} {Dmel: FBgn0052473, CG32473, [Score=293, Expect=9e-88]} {Celegans: WBGene00003914, pam-1, Aminopeptidase, [Score=251, Expect=2e-72]} {Smed: dd_Smed_v6_6470_0_1, dd_Smed_v6_6470_0_1, [Score=328, Expect=5e-100]} {RNA1509_14706} {RNA1310_6661.1} {RNA815_1900.2}
9. MligTC455_33501 123 2.57 Mlig455_003879, Mlig455_052212

Neo: -

Age: -

 0.967 - - 0.967 - - -

Mlig455_003879 {REF} {Length: 220} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_49031} {RNA1310_97783} {RNA815_54937}

Mlig455_052212 {REF} {Length: 1790} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_49031} {RNA1310_97783} {RNA815_54937}
10. MligTC455_53500 32 0.66 Mlig455_009118

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_009118 {REF} {Length: 2320} {RNA1509_16338, RNA1509_3633} {RNA1310_36186, RNA1509_16338} {RNA1509_16338, RNA815_22645}
11. MligTC455_49029 15 0.31 Mlig455_028155

Neo: -

Age: -

 SYT3 0.959 - - 0.959 - - - Mlig455_028155 {REF} {Length: 3284} {Pfam: C2 domain [PF00168.32, score=61.3]} {Human: ENSG00000213023, SYT3, synaptotagmin 3, [Score=75.9, Expect=2e-14]} {Mouse: ENSMUSG00000030731, Syt3, synaptotagmin III, [Score=74.7, Expect=3e-14]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [Score=59.3, Expect=2e-09]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [Score=59.7, Expect=1e-09]} {Smed: dd_Smed_v6_25279_0_1, dd_Smed_v6_25279_0_1, [Score=87.8, Expect=3e-19]} {RNA1310_53959} {RNA815_36451}
12. MligTC455_09874 31 0.65 Mlig455_045071

Neo: -

Age: -

 DOC2A 0.956 - - 0.956 - - - Mlig455_045071 {REF} {Length: 1760} {Pfam: C2 domain [PF00168.32, score=55.9]} {Human: ENSG00000149927, DOC2A, double C2 domain alpha, [Score=55.8, Expect=7e-08]} {Mouse: ENSMUSG00000052301, Doc2a, double C2, alpha, [Score=55.5, Expect=7e-08]} {Celegans: WBGene00004923, snt-3, SyNapTotagmin, [Score=70.5, Expect=2e-13]} {Smed: dd_Smed_v6_16731_0_1, dd_Smed_v6_16731_0_1, [Score=112, Expect=7e-27]} {RNA1310_36283} {RNA815_40844}
13. MligTC455_31142 39 0.8 Mlig455_058295

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_058295 {REF} {Length: 1338} {Pfam: Globin [PF00042.24, score=62.9]} {RNA1310_108223} {RNA815_64036}
14. MligTC455_24213 19 0.4 Mlig455_000705

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_000705 {REF} {Length: 1595} {TRANSSPLICED} {RNA1310_143135}
15. MligTC455_11118 3 0.05 Mlig455_029786

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_029786 {REF} {Length: 1368} {NoTransDecoderORF} {RNA1310_137032}

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