TomoSeq data search

Data search

Results for MligTC455_25320

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25320

36

0.76

Mlig455_047880

Neo: -

Age: -

PCLO

Mlig455_047880 {REF} {Length: 9411} {Pfam: C2 domain [PF00168.32, score=67.8]; FYVE-type zinc finger [PF02318.18, score=65.1]; Piccolo Zn-finger [PF05715.15, score=28.4]; PDZ domain [PF17820.3, score=21.8]} {Human: ENSG00000186472, PCLO, piccolo presynaptic cytomatrix protein, [RH, Score=119, Expect=9e-26]} {Mouse: ENSMUSG00000061601, Pclo, piccolo (presynaptic cytomatrix protein), [RH, Score=120, Expect=2e-26]} {Dmel: FBgn0053547, Rim, Rab3 interacting molecule, [Score=88.2, Expect=1e-16]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [Score=80.5, Expect=1e-14]} {Smed: dd_Smed_v6_9615_0_1, dd_Smed_v6_9615_0_1, [RH, Score=190, Expect=3e-48]} {RNA1509_12949, RNA1509_17082} {RNA1310_4514, RNA1509_12949} {RNA1509_12949, RNA815_4128}

Cumulative graph for MligTC455_25320

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.211	1.012	0.99984	1.00000
RegionR2	2.158	1.012	0.21697	0.58423
RegionR3	1.801	1.012	0.28324	0.82677
RegionR4	2.018	1.012	0.14900	0.39818
RegionR5	0.822	1.012	1.00000	1.00000
RegionR6	-0.611	1.012	1.00000	1.00000
RegionR7	2.465	1.012	0.11280	0.63665
RegionR8	-3.442	1.012	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.691	1.012	0.99996	1.00000
RegenerationR2	-1.194	1.012	0.18952	0.63361
RegenerationR3	0.982	1.012	0.39452	0.79909
RegenerationR4	0.197	1.012	0.83789	1.00000
RegenerationR5	1.004	1.012	0.24751	0.68098
RegenerationR6	3.309	1.012	0.06997	0.33132
RegenerationBL	-1.893	1.012	0.99979	1.00000
RegenerationTP	2.688	1.012	0.32288	0.76716

Genes with expression patterns similar to MligTC455_25320

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25320	36	0.76	Mlig455_047880	Neo: - Age: -	PCLO	4	-	-	1.000	1.000	1.000	1.000	Mlig455_047880 {REF} {Length: 9411} {Pfam: C2 domain [PF00168.32, score=67.8]; FYVE-type zinc finger [PF02318.18, score=65.1]; Piccolo Zn-finger [PF05715.15, score=28.4]; PDZ domain [PF17820.3, score=21.8]} {Human: ENSG00000186472, PCLO, piccolo presynaptic cytomatrix protein, [RH, Score=119, Expect=9e-26]} {Mouse: ENSMUSG00000061601, Pclo, piccolo (presynaptic cytomatrix protein), [RH, Score=120, Expect=2e-26]} {Dmel: FBgn0053547, Rim, Rab3 interacting molecule, [Score=88.2, Expect=1e-16]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [Score=80.5, Expect=1e-14]} {Smed: dd_Smed_v6_9615_0_1, dd_Smed_v6_9615_0_1, [RH, Score=190, Expect=3e-48]} {RNA1509_12949, RNA1509_17082} {RNA1310_4514, RNA1509_12949} {RNA1509_12949, RNA815_4128}
2.	MligTC455_42691	104	2.16	Mlig455_042573	Neo: - Age: -	ARHGAP18	0.986	-	-	-	0.986	-	-	Mlig455_042573 {REF} {Length: 3525} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=81.7]; PH domain [PF00169.31, score=20.8]} {Human: ENSG00000146376, ARHGAP18, Rho GTPase activating protein 18, [Score=139, Expect=2e-33]} {Mouse: ENSMUSG00000039031, Arhgap18, Rho GTPase activating protein 18, [Score=122, Expect=4e-28]} {Dmel: FBgn0039994, conu, conundrum, [Score=70.9, Expect=4e-12]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=58.9, Expect=2e-08]} {Smed: dd_Smed_v6_3376_0_1, dd_Smed_v6_3376_0_1, [Score=58.5, Expect=1e-08]} {RNA1509_28435} {RNA1310_13214} {RNA815_12374.1}
3.	MligTC455_18319	68	1.42	Mlig455_033078	Neo: - Age: -		0.976	-	-	-	0.976	-	-	Mlig455_033078 {REF} {Length: 3408} {Pfam: Leucine rich repeat [PF13855.8, score=25.1]} {RNA1509_58507} {RNA1310_56511} {RNA815_53024}
4.	MligTC455_53981	47	0.98	Mlig455_056056	Neo: - Age: Down-Up-Down Regeneration-enriched R4: 10.418 Regeneration-enriched TP: 9.533 Regeneration-enriched R3: 9.353 Regeneration-enriched R6: 8.536 Regeneration-enriched R5: 8.457		0.976	-	-	-	0.976	-	-	Mlig455_056056 {REF} {Length: 1317} {RNA1509_53949} {RNA1310_26557} {RNA815_12663.1}
5.	MligTC455_27023	111	2.31	Mlig455_019515, Mlig455_024490, Mlig455_029563	Neo: - Age: -		0.97	-	-	-	0.970	-	-	Mlig455_019515 {REF} {Length: 1882} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1} Mlig455_024490 {REF} {Length: 2099} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1} Mlig455_029563 {REF} {Length: 215} {NoTransDecoderORF} {RNA1509_60083} {RNA1310_4199.1} {RNA815_13624.1}
6.	MligTC455_39558	1462	30.46	Mlig455_064779	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.345 Region-enriched R7: 2.011/0.01373		0.966	-	-	-	0.966	-	-	Mlig455_064779 {REF} {Length: 1146} {Pfam: Universal stress protein family [PF00582.28, score=101.3]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=120, Expect=1e-35]} {RNA1509_6489} {RNA1310_30549} {RNA815_20356}
7.	MligTC455_31342	4	0.08	Mlig455_066505	Neo: - Age: -	PUM3	0.963	-	-	-	-	-	0.963	Mlig455_066505 {REF} {Length: 1378} {TRANSSPLICED} {Pfam: CPL (NUC119) domain [PF08144.13, score=30.7]; Pumilio-family RNA binding repeat [PF00806.21, score=24.6]} {Human: ENSG00000080608, PUM3, pumilio RNA binding family member 3, [Score=183, Expect=2e-48]} {Mouse: ENSMUSG00000041360, Pum3, pumilio RNA-binding family member 3, [Score=189, Expect=1e-50]} {Dmel: FBgn0015527, peng, penguin, [Score=119, Expect=2e-27]} {Celegans: WBGene00014165, puf-12, Pumilio domain-containing protein 12, [Score=173, Expect=5e-45]} {Smed: dd_Smed_v6_7389_0_1, dd_Smed_v6_7389_0_1, [RH, Score=208, Expect=4e-58]} {RNA1509_8112} {RNA1310_6869.1} {RNA815_1829.1}
8.	MligTC455_43577	1202	25.05	Mlig455_021499, Mlig455_067383	Neo: - Age: Down-Down-Up	AL031281.2	0.962	-	-	-	0.962	-	-	Mlig455_021499 {REF} {Length: 1203} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=66.1]; ADP-ribosylation factor family [PF00025.23, score=27.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=335, Expect=2e-118]; ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=335, Expect=2e-118]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=335, Expect=1e-118]} {Dmel: FBgn0010341, Cdc42, [RH, Score=337, Expect=2e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=326, Expect=2e-115]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=325, Expect=6e-115]} {RNA1509_43878, RNA1509_4460} {RNA1310_22711, RNA1509_43878} {RNA1509_43878, RNA815_7681.2} Mlig455_067383 {REF} {Length: 1218} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=184.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=66.1]; ADP-ribosylation factor family [PF00025.23, score=27.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.1]} {Human: ENSG00000285721, AL031281.2, novel protein, identical to cell division cycle 42 (GTP binding protein, 25kDa) CDC42, [RH, Score=335, Expect=2e-118]; ENSG00000070831, CDC42, cell division cycle 42, [RH, Score=335, Expect=2e-118]} {Mouse: ENSMUSG00000006699, Cdc42, cell division cycle 42, [RH, Score=335, Expect=1e-118]} {Dmel: FBgn0010341, Cdc42, [RH, Score=337, Expect=2e-119]} {Celegans: WBGene00000390, cdc-42, Cell division control protein 42 homolog, [RH, Score=326, Expect=2e-115]} {Smed: dd_Smed_v6_698_0_1, dd_Smed_v6_698_0_1, [RH, Score=325, Expect=6e-115]} {RNA1509_4460} {RNA1310_22711} {RNA815_7681.2}
9.	MligTC455_10931	58	1.21	Mlig455_010937	Neo: - Age: - Region-enriched R8: 5.091/0.01315		0.961	-	-	-	0.961	-	-	Mlig455_010937 {REF} {Length: 2035} {Pfam: Galactose binding lectin domain [PF02140.20, score=44.7]} {RNA1310_25216} {RNA815_30839}
10.	MligTC455_53278	158	3.28	Mlig455_006949	Neo: - Age: - Regeneration-enriched TP: 10.826 Regeneration-enriched BL: 9.300 Regeneration-enriched R3: 8.515 Regeneration-enriched R6: 7.811 Regeneration-enriched R4: 7.808 Regeneration-enriched R5: 7.623		0.961	-	-	-	0.961	-	-	Mlig455_006949 {REF} {Length: 1237} {RNA1509_34269} {RNA1310_44808} {RNA815_8213}
11.	MligTC455_36063	57	1.19	Mlig455_015640, Mlig455_020112, Mlig455_027622, Mlig455_045945, Mlig455_045973	Neo: Germline Age: -		0.957	-	-	-	0.957	-	-	Mlig455_015640 {REF} {Length: 1064} {Pfam: Phage integrase family [PF00589.24, score=20.8]} {RNA1310_118313} {RNA815_64822} Mlig455_020112 {REF} {Length: 1119} {RNA1509_19049} {RNA1310_107645} {RNA815_64822} Mlig455_027622 {REF} {Length: 693} {RNA1509_19747} {RNA1310_107645} {RNA815_64822} Mlig455_045945 {REF} {Length: 1439} {Pfam: Phage integrase family [PF00589.24, score=22.0]} {RNA1509_19747} {RNA1310_118313} {RNA815_64822} Mlig455_045973 {REF} {Length: 1439} {Pfam: Phage integrase family [PF00589.24, score=22.0]} {RNA1509_19747} {RNA1310_118313} {RNA815_64822}
12.	MligTC455_15215	22	0.46	Mlig455_037928	Neo: - Age: -	CHRNA9	0.956	-	-	0.956	-	-	-	Mlig455_037928 {REF} {Length: 2079} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=180.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=57.1]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=221, Expect=7e-65]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=220, Expect=2e-64]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=220, Expect=2e-64]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=218, Expect=9e-64]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=216, Expect=2e-63]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=222, Expect=1e-65]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=219, Expect=3e-64]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=214, Expect=7e-63]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=228, Expect=2e-65]} {Celegans: WBGene00000058, acr-19, AcetylCholine Receptor; Acetylcholine receptor (63.2 kD) (Acr-19), [Score=221, Expect=6e-65]} {Smed: dd_Smed_v6_31300_0_1, dd_Smed_v6_31300_0_1, [Score=214, Expect=1e-62]} {RNA1310_88831}
13.	MligTC455_42160	601	12.52	Mlig455_018542, Mlig455_058399	Neo: - Age: -	CAPSL	0.956	-	-	-	0.956	-	-	Mlig455_018542 {REF} {Length: 2698} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=62.3]; EF hand [PF00036.34, score=56.5]; EF-hand domain pair [PF13499.8, score=55.2]; EF hand [PF13202.8, score=41.0]; EF-hand domain pair [PF13833.8, score=39.8]} {Human: ENSG00000152611, CAPSL, calcyphosine like, [RH, Score=239, Expect=6e-77]} {Mouse: ENSMUSG00000039676, Capsl, calcyphosine-like, [Score=257, Expect=5e-84]} {Dmel: FBgn0051345, CG31345, [Score=190, Expect=5e-58]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=50.8, Expect=2e-07]} {Smed: dd_Smed_v6_7209_0_1, dd_Smed_v6_7209_0_1, [Score=239, Expect=2e-77]} {RNA1509_53428} {RNA1310_21756.3} {RNA815_16758} Mlig455_058399 {REF} {Length: 1789} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=73.0]; EF-hand domain pair [PF13499.8, score=65.7]; EF hand [PF00036.34, score=63.2]; EF hand [PF13202.8, score=50.3]; EF-hand domain pair [PF13833.8, score=44.7]} {Human: ENSG00000152611, CAPSL, calcyphosine like, [RH, Score=270, Expect=2e-92]} {Mouse: ENSMUSG00000039676, Capsl, calcyphosine-like, [RH, Score=279, Expect=5e-96]} {Dmel: FBgn0051345, CG31345, [RH, Score=240, Expect=7e-81]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=63.5, Expect=1e-12]} {Smed: dd_Smed_v6_4512_0_1, dd_Smed_v6_4512_0_1, [RH, Score=289, Expect=5e-100]} {RNA1509_53428, RNA1509_53848} {RNA1310_21756.2, RNA1509_53848} {RNA1509_53848, RNA815_16758}
14.	MligTC455_01249	5	0.11	Mlig455_055699	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_055699 {REF} {Length: 443} {NoTransDecoderORF}
15.	MligTC455_35125	956	19.93	Mlig455_039497	Neo: - Age: Down-Up-Down		0.953	-	-	-	0.953	-	-	Mlig455_039497 {REF} {Length: 3244} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=54.8]; Ankyrin repeat [PF00023.32, score=41.2]; Ankyrin repeats (many copies) [PF13637.8, score=38.3]; Ankyrin repeat [PF13606.8, score=32.3]; Ankyrin repeats (many copies) [PF13857.8, score=29.8]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=49.7, Expect=4e-06]} {RNA1509_3738} {RNA1310_6779} {RNA815_1692}

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