TomoSeq data search

Data search

Results for MligTC455_25381

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25381	7073	147.35	Mlig455_040904	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.387	ALDH6A1	Mlig455_040904 {REF} {Length: 1110} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=447.0]} {Human: ENSG00000119711, ALDH6A1, aldehyde dehydrogenase 6 family member A1, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000021238, Aldh6a1, aldehyde dehydrogenase family 6, subfamily A1, [RH, Score=752, Expect=0.0]} {Dmel: FBgn0023537, CG17896, [RH, Score=724, Expect=0.0]} {Celegans: WBGene00000114, alh-8, Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_2050_0_1, dd_Smed_v6_2050_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_15641} {RNA1310_13219} {RNA815_2776}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_25381

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.111	7.284	0.77733	1.00000
RegionR2	-0.277	7.284	0.14850	0.48118
RegionR3	0.381	7.284	0.01160	0.16915
RegionR4	0.581	7.284	0.00098	0.01027
RegionR5	0.449	7.284	0.00156	0.01444
RegionR6	0.182	7.284	0.24713	0.83285
RegionR7	-0.871	7.284	0.00010	0.00553
RegionR8	-0.334	7.284	0.19987	0.79725

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.301	7.284	0.56445	1.00000
RegenerationR2	0.407	7.284	0.01543	0.20390
RegenerationR3	0.071	7.284	0.68671	0.94281
RegenerationR4	0.217	7.284	0.22354	0.67163
RegenerationR5	0.282	7.284	0.09442	0.47055
RegenerationR6	0.2	7.284	0.26332	0.61311
RegenerationBL	0.718	7.284	0.00022	0.00773
RegenerationTP	0.245	7.284	0.30050	0.74572

Genes with expression patterns similar to MligTC455_25381

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25381	7073	147.35	Mlig455_040904	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.387	ALDH6A1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_040904 {REF} {Length: 1110} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=447.0]} {Human: ENSG00000119711, ALDH6A1, aldehyde dehydrogenase 6 family member A1, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000021238, Aldh6a1, aldehyde dehydrogenase family 6, subfamily A1, [RH, Score=752, Expect=0.0]} {Dmel: FBgn0023537, CG17896, [RH, Score=724, Expect=0.0]} {Celegans: WBGene00000114, alh-8, Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_2050_0_1, dd_Smed_v6_2050_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_15641} {RNA1310_13219} {RNA815_2776}
2.	MligTC455_25380	6622	137.96	Mlig455_040805	Neo: - Age: -	ALDH6A1	5.82	0.908	0.995	0.978	0.986	0.984	0.969	Mlig455_040805 {REF} {Length: 2106} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=447.0]} {Human: ENSG00000119711, ALDH6A1, aldehyde dehydrogenase 6 family member A1, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000021238, Aldh6a1, aldehyde dehydrogenase family 6, subfamily A1, [RH, Score=752, Expect=0.0]} {Dmel: FBgn0023537, CG17896, [RH, Score=724, Expect=0.0]} {Celegans: WBGene00000114, alh-8, Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_2050_0_1, dd_Smed_v6_2050_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_15641, RNA1509_735} {RNA1310_13219, RNA1509_15641, RNA1509_735} {RNA1509_15641, RNA1509_735, RNA815_2776}
3.	MligTC455_24059	869	18.1	Mlig455_065283, Mlig455_065309	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.571	NDUFS1	1.763	-	-	0.794	0.969	-	-	Mlig455_065283 {REF} {Length: 2516} {Pfam: Molybdopterin oxidoreductase [PF00384.24, score=208.0]; NADH-ubiquinone oxidoreductase subunit G, C-terminal [PF09326.13, score=56.1]} {Human: ENSG00000023228, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=645, Expect=0.0]; ENSG00000283447, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=645, Expect=0.0]} {Mouse: ENSMUSG00000025968, Ndufs1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=635, Expect=0.0]} {Dmel: FBgn0017566, ND-75, NADH dehydrogenase (ubiquinone) 75 kDa subunit, [Score=558, Expect=0.0]} {Celegans: WBGene00021562, nuo-5, NADH Ubiquinone Oxidoreductase, [Score=514, Expect=2e-174]} {Smed: dd_Smed_v6_2402_0_1, dd_Smed_v6_2402_0_1, [Score=572, Expect=0.0]} {RNA1509_1870} {RNA1310_6597} {RNA815_1467.1} Mlig455_065309 {REF} {Length: 1229} {Pfam: Molybdopterin oxidoreductase [PF00384.24, score=176.8]; NADH-ubiquinone oxidoreductase subunit G, C-terminal [PF09326.13, score=42.6]} {Human: ENSG00000283447, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=357, Expect=1e-117]; ENSG00000023228, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=357, Expect=1e-117]} {Mouse: ENSMUSG00000025968, Ndufs1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=342, Expect=5e-111]} {Dmel: FBgn0017566, ND-75, NADH dehydrogenase (ubiquinone) 75 kDa subunit, [Score=301, Expect=2e-95]} {Celegans: WBGene00021562, nuo-5, NADH Ubiquinone Oxidoreductase, [Score=249, Expect=1e-75]} {Smed: dd_Smed_v6_2402_0_1, dd_Smed_v6_2402_0_1, [Score=300, Expect=5e-95]} {RNA1509_1870} {RNA1310_6597} {RNA815_1467.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_25381

7073

147.35

Mlig455_040904

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.387

ALDH6A1

1.000

MligTC455_25380

6622

137.96

Mlig455_040805

Neo: -

Age: -

ALDH6A1

5.82

0.908

0.995

0.978

0.986

0.984

0.969

Mlig455_040805 {REF} {Length: 2106} {Pfam: Aldehyde dehydrogenase family [PF00171.24, score=447.0]} {Human: ENSG00000119711, ALDH6A1, aldehyde dehydrogenase 6 family member A1, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000021238, Aldh6a1, aldehyde dehydrogenase family 6, subfamily A1, [RH, Score=752, Expect=0.0]} {Dmel: FBgn0023537, CG17896, [RH, Score=724, Expect=0.0]} {Celegans: WBGene00000114, alh-8, Probable methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial, [RH, Score=712, Expect=0.0]} {Smed: dd_Smed_v6_2050_0_1, dd_Smed_v6_2050_0_1, [RH, Score=796, Expect=0.0]} {RNA1509_15641, RNA1509_735} {RNA1310_13219, RNA1509_15641, RNA1509_735} {RNA1509_15641, RNA1509_735, RNA815_2776}

MligTC455_24059

869

18.1

Mlig455_065283, Mlig455_065309

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.571

NDUFS1

1.763

0.794

0.969

Mlig455_065283 {REF} {Length: 2516} {Pfam: Molybdopterin oxidoreductase [PF00384.24, score=208.0]; NADH-ubiquinone oxidoreductase subunit G, C-terminal [PF09326.13, score=56.1]} {Human: ENSG00000023228, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=645, Expect=0.0]; ENSG00000283447, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=645, Expect=0.0]} {Mouse: ENSMUSG00000025968, Ndufs1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=635, Expect=0.0]} {Dmel: FBgn0017566, ND-75, NADH dehydrogenase (ubiquinone) 75 kDa subunit, [Score=558, Expect=0.0]} {Celegans: WBGene00021562, nuo-5, NADH Ubiquinone Oxidoreductase, [Score=514, Expect=2e-174]} {Smed: dd_Smed_v6_2402_0_1, dd_Smed_v6_2402_0_1, [Score=572, Expect=0.0]} {RNA1509_1870} {RNA1310_6597} {RNA815_1467.1}

Mlig455_065309 {REF} {Length: 1229} {Pfam: Molybdopterin oxidoreductase [PF00384.24, score=176.8]; NADH-ubiquinone oxidoreductase subunit G, C-terminal [PF09326.13, score=42.6]} {Human: ENSG00000283447, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=357, Expect=1e-117]; ENSG00000023228, NDUFS1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=357, Expect=1e-117]} {Mouse: ENSMUSG00000025968, Ndufs1, NADH:ubiquinone oxidoreductase core subunit S1, [Score=342, Expect=5e-111]} {Dmel: FBgn0017566, ND-75, NADH dehydrogenase (ubiquinone) 75 kDa subunit, [Score=301, Expect=2e-95]} {Celegans: WBGene00021562, nuo-5, NADH Ubiquinone Oxidoreductase, [Score=249, Expect=1e-75]} {Smed: dd_Smed_v6_2402_0_1, dd_Smed_v6_2402_0_1, [Score=300, Expect=5e-95]} {RNA1509_1870} {RNA1310_6597} {RNA815_1467.1}