Data search


search
Exact
Search

Results for MligTC455_25490

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25490 396 8.25 Mlig455_023544, Mlig455_023650

Neo: -

Age: -

CEP104

Mlig455_023544 {REF} {Length: 3493} {TRANSSPLICED} {Human: ENSG00000116198, CEP104, centrosomal protein 104, [Score=213, Expect=2e-58]} {Mouse: ENSMUSG00000039523, Cep104, centrosomal protein 104, [Score=203, Expect=4e-55]} {Dmel: FBgn0032800, CG10137, [Score=113, Expect=1e-25]} {Celegans: WBGene00015517, C06A8.8, [RH, Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_10228_0_1, dd_Smed_v6_10228_0_1, [Score=226, Expect=1e-63]} {RNA1509_21402} {RNA1310_11973} {RNA815_5128}

Mlig455_023650 {REF} {Length: 3519} {TRANSSPLICED} {Human: ENSG00000116198, CEP104, centrosomal protein 104, [Score=209, Expect=4e-57]} {Mouse: ENSMUSG00000039523, Cep104, centrosomal protein 104, [Score=200, Expect=5e-54]} {Dmel: FBgn0032800, CG10137, [Score=116, Expect=1e-26]} {Celegans: WBGene00015517, C06A8.8, [RH, Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_10228_0_1, dd_Smed_v6_10228_0_1, [Score=225, Expect=3e-63]} {RNA1509_21402} {RNA1310_11973, RNA1509_21402} {RNA1509_21402, RNA815_5128}

Cumulative graph for MligTC455_25490

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.144 3.453 0.86614 1.00000
RegionR2 2.285 3.453 0.00711 0.08093
RegionR3 1.065 3.453 0.15129 0.65883
RegionR4 0.32 3.453 0.62403 0.93342
RegionR5 0.748 3.453 0.30169 0.63741
RegionR6 0.937 3.453 0.21968 0.79926
RegionR7 1.589 3.453 0.05053 0.43228
RegionR8 -6.799 3.453 0.00556 0.13459

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.858 3.453 0.38771 1.00000
RegenerationR2 0.607 3.453 0.27769 0.72154
RegenerationR3 0.454 3.453 0.49956 0.85716
RegenerationR4 0.609 3.453 0.39110 0.80800
RegenerationR5 0.78 3.453 0.21909 0.65377
RegenerationR6 0.768 3.453 0.26529 0.61511
RegenerationBL 2.891 3.453 0.01557 0.13153
RegenerationTP 4.742 3.453 0.00037 0.02625


Genes with expression patterns similar to MligTC455_25490

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25490 396 8.25 Mlig455_023544, Mlig455_023650

Neo: -

Age: -

CEP104 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_023544 {REF} {Length: 3493} {TRANSSPLICED} {Human: ENSG00000116198, CEP104, centrosomal protein 104, [Score=213, Expect=2e-58]} {Mouse: ENSMUSG00000039523, Cep104, centrosomal protein 104, [Score=203, Expect=4e-55]} {Dmel: FBgn0032800, CG10137, [Score=113, Expect=1e-25]} {Celegans: WBGene00015517, C06A8.8, [RH, Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_10228_0_1, dd_Smed_v6_10228_0_1, [Score=226, Expect=1e-63]} {RNA1509_21402} {RNA1310_11973} {RNA815_5128}

Mlig455_023650 {REF} {Length: 3519} {TRANSSPLICED} {Human: ENSG00000116198, CEP104, centrosomal protein 104, [Score=209, Expect=4e-57]} {Mouse: ENSMUSG00000039523, Cep104, centrosomal protein 104, [Score=200, Expect=5e-54]} {Dmel: FBgn0032800, CG10137, [Score=116, Expect=1e-26]} {Celegans: WBGene00015517, C06A8.8, [RH, Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_10228_0_1, dd_Smed_v6_10228_0_1, [Score=225, Expect=3e-63]} {RNA1509_21402} {RNA1310_11973, RNA1509_21402} {RNA1509_21402, RNA815_5128}
2. MligTC455_15480 993 20.69 Mlig455_044925, Mlig455_055524

Neo: -

Age: Down-Up-Down

C1GALT1 1.856 - - - - 0.951 0.905

Mlig455_044925 {REF} {Length: 2812} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=28.9]; Fringe-like [PF02434.18, score=27.5]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=231, Expect=4e-73]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=229, Expect=2e-72]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=220, Expect=7e-69]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=233, Expect=4e-74]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=229, Expect=7e-73]} {RNA1509_16032} {RNA1310_4845} {RNA815_6807.1}

Mlig455_055524 {REF} {Length: 3113} {TRANSSPLICED} {Pfam: Galactosyltransferase [PF01762.23, score=28.5]; Fringe-like [PF02434.18, score=27.1]} {Human: ENSG00000106392, C1GALT1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=255, Expect=4e-82]} {Mouse: ENSMUSG00000042460, C1galt1, core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, [Score=252, Expect=3e-81]} {Dmel: FBgn0032078, C1GalTA, Core 1 Galactosyltransferase A, [Score=250, Expect=3e-80]} {Celegans: WBGene00008019, C38H2.2, Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, [Score=259, Expect=7e-84]} {Smed: dd_Smed_v6_4310_0_1, dd_Smed_v6_4310_0_1, [Score=262, Expect=2e-85]} {RNA1509_16032, RNA1509_16761, RNA1509_26187, RNA1509_46303} {RNA1310_4845, RNA1509_16761, RNA1509_26187, RNA1509_46303} {RNA1509_16761, RNA1509_26187, RNA1509_46303, RNA815_6807.1}
3. MligTC455_52262 145 3.02 Mlig455_055398

Neo: -

Age: -

DHX9 1.744 - - 0.950 - - 0.794 Mlig455_055398 {REF} {Length: 4891} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=73.1]; Helicase conserved C-terminal domain [PF00271.33, score=52.8]; Helicase associated domain (HA2) [PF04408.25, score=50.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=39.1]; DEAD/DEAH box helicase [PF00270.31, score=30.5]} {Human: ENSG00000135829, DHX9, DExH-box helicase 9, [RH, Score=1137, Expect=0.0]} {Mouse: ENSMUSG00000042699, Dhx9, DEAH (Asp-Glu-Ala-His) box polypeptide 9, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0002774, mle, maleless, [RH, Score=1058, Expect=0.0]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [RH, Score=868, Expect=0.0]} {Smed: dd_Smed_v6_4815_0_1, dd_Smed_v6_4815_0_1, [RH, Score=1115, Expect=0.0]} {RNA1509_8352} {RNA1310_2204.1} {RNA815_3757}
4. MligTC455_37431 35 0.74 Mlig455_021017

Neo: -

Age: -

TMEM268 0.984 - - 0.984 - - - Mlig455_021017 {REF} {Length: 1973} {Pfam: Domain of unknown function (DUF4481) [PF14800.8, score=60.3]} {Human: ENSG00000157693, TMEM268, transmembrane protein 268, [Score=52.8, Expect=6e-07]} {Mouse: ENSMUSG00000045917, Tmem268, transmembrane protein 268, [Score=58.2, Expect=8e-09]} {Dmel: FBgn0028527, CG18507, [Score=55.1, Expect=8e-08]} {RNA1310_62734} {RNA815_60695}
5. MligTC455_46517 122 2.54 Mlig455_051299

Neo: -

Age: -

Region-enriched R2: 3.450/0.03846

ERC2 0.978 - - 0.978 - - - Mlig455_051299 {REF} {Length: 6303} {TRANSSPLICED} {Pfam: RIM-binding protein of the cytomatrix active zone [PF10174.11, score=167.4]; Tropomyosin like [PF12718.9, score=22.2]; Autophagy protein 16 (ATG16) [PF08614.13, score=20.7]} {Human: ENSG00000187672, ERC2, ELKS/RAB6-interacting/CAST family member 2, [Score=143, Expect=1e-33]} {Mouse: ENSMUSG00000040640, Erc2, ELKS/RAB6-interacting/CAST family member 2, [Score=143, Expect=6e-34]} {Dmel: FBgn0259246, brp, bruchpilot, [Score=117, Expect=1e-25]} {Smed: dd_Smed_v6_12278_0_1, dd_Smed_v6_12278_0_1, [Score=211, Expect=9e-55]} {RNA1509_45174, RNA1509_45537} {RNA1310_5220.1, RNA1509_45537} {RNA1509_45537, RNA815_13350}
6. MligTC455_38369 100 2.08 Mlig455_026465

Neo: -

Age: -

SSUH2 0.973 - - 0.973 - - - Mlig455_026465 {REF} {Length: 1913} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [RH, Score=238, Expect=2e-74]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [RH, Score=200, Expect=2e-60]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=122, Expect=4e-31]} {RNA1509_6425} {RNA1310_32434} {RNA815_16161}
7. MligTC455_04963 405 8.45 Mlig455_026406

Neo: -

Age: -

Region-enriched R2: 2.324/0.00158

CMTM4 0.972 - - - - 0.972 - Mlig455_026406 {REF} {Length: 3113} {TRANSSPLICED} {Pfam: Membrane-associating domain [PF01284.25, score=35.1]} {Human: ENSG00000183723, CMTM4, CKLF like MARVEL transmembrane domain containing 4, [RH, Score=55.1, Expect=9e-09]} {Mouse: ENSMUSG00000096188, Cmtm4, CKLF-like MARVEL transmembrane domain containing 4, [RH, Score=54.3, Expect=8e-09]} {Smed: dd_Smed_v6_3096_0_1, dd_Smed_v6_3096_0_1, [RH, Score=48.9, Expect=2e-07]} {RNA1509_29650, RNA1509_40240, RNA1509_48524} {RNA1310_28127, RNA1509_29650, RNA1509_40240, RNA1509_48524} {RNA1509_29650, RNA1509_40240, RNA1509_48524, RNA815_15507}
8. MligTC455_25900 124 2.57 Mlig455_026948

Neo: -

Age: logFC(26M/2M)=7.757

0.968 - - 0.968 - - - Mlig455_026948 {REF} {Length: 4613} {TRANSSPLICED} {RNA1509_3577} {RNA1310_173.2} {RNA815_485.1}
9. MligTC455_36325 46 0.96 Mlig455_013353

Neo: -

Age: Up-Down-Down

SLC13A5 0.966 - - 0.966 - - - Mlig455_013353 {REF} {Length: 4075} {TRANSSPLICED} {Pfam: Sodium:sulfate symporter transmembrane region [PF00939.21, score=297.5]; Citrate transporter [PF03600.18, score=99.1]} {Human: ENSG00000141485, SLC13A5, solute carrier family 13 member 5, [Score=385, Expect=8e-124]} {Mouse: ENSMUSG00000001095, Slc13a2, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2, [Score=365, Expect=7e-116]; ENSMUSG00000020805, Slc13a5, solute carrier family 13 (sodium-dependent citrate transporter), member 5, [Score=358, Expect=1e-113]; ENSMUSG00000018459, Slc13a3, solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3, [Score=350, Expect=3e-110]; ENSMUSG00000029700, Slc13a1, solute carrier family 13 (sodium/sulfate symporters), member 1, [Score=347, Expect=5e-109]} {Dmel: FBgn0036816, Indy, I'm not dead yet, [Score=290, Expect=1e-87]} {Celegans: WBGene00003517, nac-1, Sodium-dependent low-affinity dicarboxylate transporter 1, [Score=319, Expect=7e-99]} {Smed: dd_Smed_v6_5476_0_1, dd_Smed_v6_5476_0_1, [Score=327, Expect=8e-102]} {RNA1509_49327} {RNA1310_3932} {RNA815_2313}
10. MligTC455_04962 403 8.39 Mlig455_019967

Neo: -

Age: logFC(26M/2M)=0.613

Region-enriched R2: 2.312/0.00157

0.964 - - - - 0.964 - Mlig455_019967 {REF} {Length: 1521} {NoTransDecoderORF} {RNA1509_33474, RNA1509_51437} {RNA1310_22931.1, RNA1509_33474, RNA1509_51437} {RNA1509_33474, RNA1509_51437, RNA815_20387.1}
11. MligTC455_17752 226 4.71 Mlig455_030604, Mlig455_031036

Neo: -

Age: -

SHOX, SHOX2 0.964 - - 0.964 - - -

Mlig455_030604 {REF} {Length: 2696} {Pfam: Homeodomain [PF00046.31, score=84.7]; Homeobox KN domain [PF05920.13, score=23.1]} {Human: ENSG00000168779, SHOX2, short stature homeobox 2, [RH, Score=125, Expect=6e-34]; ENSG00000185960, SHOX, short stature homeobox, [RH, Score=123, Expect=6e-33]} {Mouse: ENSMUSG00000027833, Shox2, short stature homeobox 2, [RH, Score=125, Expect=4e-34]} {Dmel: FBgn0085396, CG34367, [RH, Score=125, Expect=3e-32]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [Score=94.7, Expect=2e-22]} {Smed: dd_Smed_v6_28958_0_1, dd_Smed_v6_28958_0_1, [RH, Score=104, Expect=5e-27]} {RNA1509_45406} {RNA1310_16717} {RNA815_29025}

Mlig455_031036 {REF} {Length: 3001} {Pfam: Homeodomain [PF00046.31, score=84.8]; Homeobox KN domain [PF05920.13, score=23.1]} {Human: ENSG00000185960, SHOX, short stature homeobox, [RH, Score=126, Expect=2e-33]; ENSG00000168779, SHOX2, short stature homeobox 2, [RH, Score=124, Expect=7e-34]} {Mouse: ENSMUSG00000027833, Shox2, short stature homeobox 2, [RH, Score=124, Expect=9e-35]} {Dmel: FBgn0085396, CG34367, [RH, Score=125, Expect=3e-32]} {Celegans: WBGene00006744, unc-4, Homeobox protein unc-4, [Score=94.7, Expect=2e-22]} {Smed: dd_Smed_v6_28958_0_1, dd_Smed_v6_28958_0_1, [RH, Score=104, Expect=5e-27]} {RNA1509_45406} {RNA1310_16717} {RNA815_29025}
12. MligTC455_50659 51 1.05 Mlig455_019368

Neo: -

Age: Up-Down-Down

SLC9B2 0.963 - - 0.963 - - - Mlig455_019368 {REF} {Length: 4402} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=107.6]} {Human: ENSG00000164038, SLC9B2, solute carrier family 9 member B2, [Score=318, Expect=5e-99]} {Mouse: ENSMUSG00000050150, Slc9b1, solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1, [RH, Score=307, Expect=1e-94]} {Dmel: FBgn0031865, Nha1, Na[+]/H[+] hydrogen antiporter 1, [RH, Score=274, Expect=1e-80]} {Celegans: WBGene00009617, F41E7.1, [RH, Score=131, Expect=6e-32]} {Smed: dd_Smed_v6_7736_0_2, dd_Smed_v6_7736_0_2, [RH, Score=348, Expect=1e-111]} {RNA1509_53260} {RNA1310_33802} {RNA815_25816}
13. MligTC455_23496 88 1.84 Mlig455_002345

Neo: -

Age: logFC(26M/2M)=0.374

0.961 - - 0.961 - - - Mlig455_002345 {REF} {Length: 3546} {RNA1509_40264} {RNA1310_8050, RNA1509_40264} {RNA1509_40264, RNA815_3000.1}
14. MligTC455_41817 273 5.69 Mlig455_050915

Neo: -

Age: Down-Down-Up

Region-enriched R2: 2.421/0.00679

0.961 - - 0.961 - - - Mlig455_050915 {REF} {Length: 1810} {TRANSSPLICED} {RNA1509_26844, RNA1509_35213} {RNA1310_16013.2, RNA1509_26844, RNA1509_35213} {RNA1509_26844, RNA1509_35213, RNA815_32730}
15. MligTC455_49640 1122 23.38 Mlig455_063691

Neo: -

Age: logFC(26M/2M)=-0.370

Region-enriched R7: 2.861/0.00000
Region-enriched R6: 1.635/0.02487

Regeneration-downregulated BL: -2.323

Regeneration-depleted BL: -2.323

0.96 - - - - 0.960 - Mlig455_063691 {REF} {Length: 922} {RNA1509_5516} {RNA1310_77638} {RNA815_34597}
16. MligTC455_51238 58 1.21 Mlig455_011511

Neo: -

Age: -

KCNMA1 0.96 - - 0.960 - - - Mlig455_011511 {REF} {Length: 2300} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=100.8]; Ion channel [PF07885.18, score=29.2]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=272, Expect=4e-80]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=271, Expect=4e-79]} {Dmel: FBgn0003429, slo, slowpoke, [Score=180, Expect=8e-48]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=269, Expect=9e-79]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=294, Expect=9e-88]} {RNA1310_5274} {RNA815_44227}
17. MligTC455_30325 15 0.31 Mlig455_043329

Neo: -

Age: -

NYNRIN 0.956 - - 0.956 - - - Mlig455_043329 {REF} {Length: 3260} {Pfam: Integrase zinc binding domain [PF17921.3, score=79.6]; Integrase core domain [PF00665.28, score=56.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=118, Expect=7e-27]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=122, Expect=3e-28]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=207, Expect=1e-59]} {RNA1509_29299} {RNA1310_18534} {RNA815_7746}
18. MligTC455_30326 16 0.34 Mlig455_043331

Neo: -

Age: -

0.956 - - 0.956 - - - Mlig455_043331 {REF} {Length: 1862} {RNA1509_29299} {RNA1310_70970} {RNA815_35302}
19. MligTC455_33511 496 10.33 Mlig455_019112

Neo: -

Age: -

Region-enriched R2: 2.637/0.00674

INPP1 0.956 - - 0.956 - - - Mlig455_019112 {REF} {Length: 2860} {Pfam: Inositol monophosphatase family [PF00459.27, score=118.2]} {Human: ENSG00000151689, INPP1, inositol polyphosphate-1-phosphatase, [RH, Score=262, Expect=4e-83]} {Mouse: ENSMUSG00000026102, Inpp1, inositol polyphosphate-1-phosphatase, [RH, Score=297, Expect=7e-97]} {Dmel: FBgn0016672, Ipp, Inositol polyphosphate 1-phosphatase, [RH, Score=252, Expect=6e-80]} {Celegans: WBGene00044063, bpnt-1, 3'(2'), 5'-BisPhosphate NucleoTidase 1 homolog, [Score=74.7, Expect=1e-14]} {Smed: dd_Smed_v6_9612_0_1, dd_Smed_v6_9612_0_1, [RH, Score=197, Expect=6e-59]} {RNA1509_8591} {RNA1310_6898.1} {RNA815_7520}
20. MligTC455_39706 142 2.95 Mlig455_025725

Neo: -

Age: -

TCF4 0.955 - - 0.955 - - - Mlig455_025725 {REF} {Length: 3387} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=34.9]} {Human: ENSG00000196628, TCF4, transcription factor 4, [RH, Score=159, Expect=7e-41]; ENSG00000071564, TCF3, transcription factor 3, [RH, Score=157, Expect=1e-39]; ENSG00000140262, TCF12, transcription factor 12, [RH, Score=157, Expect=6e-41]} {Mouse: ENSMUSG00000020167, Tcf3, transcription factor 3, [RH, Score=160, Expect=8e-41]; ENSMUSG00000053477, Tcf4, transcription factor 4, [RH, Score=158, Expect=5e-41]; ENSMUSG00000032228, Tcf12, transcription factor 12, [RH, Score=157, Expect=2e-40]} {Dmel: FBgn0267821, da, daughterless, [RH, Score=154, Expect=9e-39]} {Celegans: WBGene00001949, hlh-2, Helix Loop Helix, [RH, Score=108, Expect=6e-25]} {Smed: dd_Smed_v6_5579_0_1, dd_Smed_v6_5579_0_1, [RH, Score=167, Expect=3e-43]} {RNA1509_43202} {RNA1310_31462} {RNA815_24954}
21. MligTC455_23156 88 1.83 Mlig455_048448

Neo: -

Age: -

0.954 - - 0.954 - - - Mlig455_048448 {REF} {Length: 3286} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=26.5]; Eukaryotic translation initiation factor 2 alpha subunit [PF07541.14, score=24.8]} {RNA1509_17687} {RNA1310_16014.1} {RNA815_8001}
22. MligTC455_25403 79 1.66 Mlig455_036259, Mlig455_040819

Neo: -

Age: Up-Down-Up

GVQW3 0.954 - - 0.954 - - -

Mlig455_036259 {REF} {Length: 1703} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=38.6]; Homeodomain-like domain [PF13565.8, score=30.1]; HTH domain in Mos1 transposase [PF17906.3, score=25.3]; Winged helix-turn helix [PF13551.8, score=18.5]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=56.2, Expect=1e-08]} {RNA1509_55432} {RNA1310_7362.1} {RNA815_6705.1}

Mlig455_040819 {REF} {Length: 1465} {Pfam: Putative DNA-binding domain [PF04326.16, score=33.6]} {RNA1509_47755} {RNA1310_37975} {RNA815_40947}
23. MligTC455_33854 41 0.85 Mlig455_031601

Neo: -

Age: -

Region-enriched R2: 5.730/0.00808

0.954 - - 0.954 - - - Mlig455_031601 {REF} {Length: 1072} {RNA1310_42312} {RNA815_56269}
24. MligTC455_47918 119 2.48 Mlig455_006053

Neo: -

Age: Down-Down-Up

PODNL1 0.954 - - 0.954 - - - Mlig455_006053 {REF} {Length: 2760} {Pfam: Leucine rich repeat [PF13855.8, score=191.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=113.3]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=36.9]; Leucine Rich Repeat [PF00560.35, score=35.8]; Leucine Rich repeat [PF13516.8, score=34.6]; Leucine-rich repeat [PF14580.8, score=29.3]; Leucine rich repeat C-terminal domain [PF01463.26, score=21.8]} {Human: ENSG00000132000, PODNL1, podocan like 1, [Score=90.1, Expect=4e-18]; ENSG00000099769, IGFALS, insulin like growth factor binding protein acid labile subunit, [Score=87.8, Expect=3e-17]; ENSG00000205213, LGR4, leucine rich repeat containing G protein-coupled receptor 4, [Score=87.8, Expect=4e-17]; ENSG00000137507, LRRC32, leucine rich repeat containing 32, [Score=87.4, Expect=4e-17]} {Mouse: ENSMUSG00000063765, Chadl, chondroadherin-like, [Score=96.3, Expect=5e-20]; ENSMUSG00000052316, Lrrc15, leucine rich repeat containing 15, [Score=92.4, Expect=7e-19]; ENSMUSG00000046070, Igfals, insulin-like growth factor binding protein, acid labile subunit, [Score=92.0, Expect=8e-19]} {Dmel: FBgn0261269, conv, convoluted, [Score=109, Expect=4e-24]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=92.0, Expect=9e-19]} {Smed: dd_Smed_v6_6669_0_1, dd_Smed_v6_6669_0_1, [Score=92.8, Expect=3e-19]} {RNA1509_47596} {RNA1310_6895, RNA1509_47596} {RNA1509_47596, RNA815_5082}
25. MligTC455_42130 49 1.02 Mlig455_031418

Neo: -

Age: -

0.953 - - 0.953 - - - Mlig455_031418 {REF} {Length: 1285} {RNA1310_89057}
26. MligTC455_16815 51 1.07 Mlig455_038730

Neo: -

Age: -

KCNC1 0.952 - - 0.952 - - - Mlig455_038730 {REF} {Length: 3802} {Pfam: Ion transport protein [PF00520.33, score=148.9]; BTB/POZ domain [PF02214.24, score=99.7]; Ion channel [PF07885.18, score=45.1]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [RH, Score=425, Expect=1e-141]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [RH, Score=425, Expect=2e-141]; ENSG00000116396, KCNC4, potassium voltage-gated channel subfamily C member 4, [RH, Score=404, Expect=7e-133]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [RH, Score=425, Expect=7e-142]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [RH, Score=411, Expect=2e-135]; ENSMUSG00000062785, Kcnc3, potassium voltage gated channel, Shaw-related subfamily, member 3, [RH, Score=409, Expect=2e-133]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [RH, Score=697, Expect=0.0]} {Celegans: WBGene00008819, shw-1, SHaW family of potassium channels, [RH, Score=594, Expect=0.0]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [RH, Score=686, Expect=0.0]} {RNA1310_23163} {RNA815_9933.1}
27. MligTC455_53118 133 2.76 Mlig455_029477

Neo: -

Age: -

CHRNA2 0.952 - - 0.952 - - - Mlig455_029477 {REF} {Length: 3006} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=160.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=103.2]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=212, Expect=1e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=210, Expect=4e-59]} {Mouse: ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=209, Expect=3e-59]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=207, Expect=2e-59]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=204, Expect=1e-58]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=204, Expect=4e-58]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [Score=208, Expect=1e-57]} {Celegans: WBGene00043066, acr-25, AcetylCholine Receptor, [Score=202, Expect=2e-57]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=437, Expect=6e-147]} {RNA1509_18288} {RNA1310_21192} {RNA815_24334}
28. MligTC455_15425 20 0.41 Mlig455_005371

Neo: -

Age: -

0.951 - - 0.951 - - - Mlig455_005371 {REF} {Length: 1504} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_54681} {RNA1310_18763} {RNA815_17502}
29. MligTC455_27301 1291 26.89 Mlig455_031019

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.229

0.951 - - - - 0.951 - Mlig455_031019 {REF} {Length: 3754} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=177, Expect=9e-56]} {RNA1509_31486} {RNA1310_20686, RNA1509_31486} {RNA1509_31486, RNA815_9356.1}
30. MligTC455_53000 122 2.55 Mlig455_017611

Neo: -

Age: Down-Up-Down

0.951 - - - 0.951 - - Mlig455_017611 {REF} {Length: 2577} {Pfam: Otopetrin [PF03189.15, score=21.6]} {RNA1509_54233} {RNA1310_9118} {RNA815_5019.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA