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Results for MligTC455_15425

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15425 20 0.41 Mlig455_005371

Neo: -

Age: -

 Mlig455_005371 {REF} {Length: 1504} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_54681} {RNA1310_18763} {RNA815_17502}

Cumulative graph for MligTC455_15425

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.184 0.867 1.00000 1.00000
RegionR2 0.532 0.867 0.66595 0.99621
RegionR3 -0.772 0.867 1.00000 1.00000
RegionR4 1.956 0.867 0.17263 0.43735
RegionR5 0.269 0.867 1.00000 1.00000
RegionR6 0.614 0.867 0.33803 0.92533
RegionR7 1.741 0.867 0.27289 0.90429
RegionR8 -1.156 0.867 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.074 0.867 1.00000 1.00000
RegenerationR2 -1.21 0.867 0.53782 0.88727
RegenerationR3 0.465 0.867 0.35273 0.77262
RegenerationR4 -0.463 0.867 0.82112 0.99442
RegenerationR5 -1.374 0.867 0.66105 0.93648
RegenerationR6 0.026 0.867 0.76516 0.95887
RegenerationBL 0.597 0.867 0.69510 1.00000
RegenerationTP -2.784 0.867 1.00000 1.00000


Genes with expression patterns similar to MligTC455_15425

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15425 20 0.41 Mlig455_005371

Neo: -

Age: -

 2 - - 1.000 - 1.000 - Mlig455_005371 {REF} {Length: 1504} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.5]} {RNA1509_54681} {RNA1310_18763} {RNA815_17502}
2. MligTC455_09076 32 0.66 Mlig455_011956

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_011956 {REF} {Length: 738} {RNA1509_39566} {RNA1310_47180} {RNA815_26826}
3. MligTC455_47732 129 2.68 Mlig455_025199, Mlig455_025658

Neo: -

Age: -

 RAC1 0.975 - - 0.975 - - -

Mlig455_025199 {REF} {Length: 1151} {Pfam: Ras family [PF00071.24, score=22.5]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=56.6, Expect=1e-10]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=59.3, Expect=2e-11]} {Dmel: FBgn0010333, Rac1, [Score=58.9, Expect=2e-11]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=57.8, Expect=4e-11]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=66.2, Expect=2e-14]} {RNA1509_55963} {RNA1310_40048} {RNA815_24639}

Mlig455_025658 {REF} {Length: 1673} {Pfam: Ras family [PF00071.24, score=161.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=74.6]; ADP-ribosylation factor family [PF00025.23, score=26.3]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=206, Expect=6e-68]; ENSG00000177105, RHOG, ras homolog family member G, [Score=201, Expect=7e-66]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=197, Expect=3e-64]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=206, Expect=4e-68]; ENSMUSG00000073982, Rhog, ras homolog family member G, [Score=201, Expect=5e-66]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=197, Expect=2e-64]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=196, Expect=4e-64]} {Dmel: FBgn0010333, Rac1, [Score=202, Expect=1e-66]} {Celegans: WBGene00003239, mig-2, Rac-like GTPase, [Score=204, Expect=2e-67]} {Smed: dd_Smed_v6_913_0_1, dd_Smed_v6_913_0_1, [Score=205, Expect=9e-68]} {RNA1509_55963} {RNA1310_40048, RNA1509_55963} {RNA1509_55963, RNA815_24639}
4. MligTC455_53761 24 0.5 Mlig455_007185

Neo: -

Age: Up-Down-Up

Region-enriched R4: 4.757/0.00792

 FMO2 0.972 - - - - 0.972 - Mlig455_007185 {REF} {Length: 1935} {TRANSSPLICED} {Pfam: Flavin-binding monooxygenase-like [PF00743.21, score=108.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=36.2]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=33.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=30.3]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=28.4]; FAD dependent oxidoreductase [PF01266.26, score=26.5]; FAD-NAD(P)-binding [PF13454.8, score=24.6]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=23.8]; FAD dependent oxidoreductase [PF12831.9, score=21.2]} {Human: ENSG00000094963, FMO2, flavin containing monooxygenase 2, [Score=113, Expect=2e-26]; ENSG00000131781, FMO5, flavin containing monooxygenase 5, [Score=108, Expect=1e-24]} {Mouse: ENSMUSG00000086056, Gm4846, predicted gene 4846, [Score=135, Expect=2e-34]} {Dmel: FBgn0034943, Fmo-1, Flavin-containing monooxygenase 1, [Score=57.4, Expect=1e-08]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [Score=95.5, Expect=7e-21]} {RNA1509_30219} {RNA1310_11452.1} {RNA815_16767}
5. MligTC455_37431 35 0.74 Mlig455_021017

Neo: -

Age: -

 TMEM268 0.971 - - 0.971 - - - Mlig455_021017 {REF} {Length: 1973} {Pfam: Domain of unknown function (DUF4481) [PF14800.8, score=60.3]} {Human: ENSG00000157693, TMEM268, transmembrane protein 268, [Score=52.8, Expect=6e-07]} {Mouse: ENSMUSG00000045917, Tmem268, transmembrane protein 268, [Score=58.2, Expect=8e-09]} {Dmel: FBgn0028527, CG18507, [Score=55.1, Expect=8e-08]} {RNA1310_62734} {RNA815_60695}
6. MligTC455_41559 93 1.94 Mlig455_043996

Neo: -

Age: logFC(26M/2M)=0.546

 0.966 - - - - 0.966 - Mlig455_043996 {REF} {Length: 1328} {RNA1310_53857.1} {RNA815_33114}
7. MligTC455_33362 91 1.89 Mlig455_044594

Neo: -

Age: logFC(26M/2M)=-0.300

 0.965 - - 0.965 - - - Mlig455_044594 {REF} {Length: 3890} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=46.0]; EF hand [PF00036.34, score=37.3]; EF-hand domain [PF13405.8, score=35.1]; EF hand [PF13202.8, score=25.9]} {RNA1509_5069} {RNA1310_3608.1} {RNA815_1684.1}
8. MligTC455_41817 273 5.69 Mlig455_050915

Neo: -

Age: Down-Down-Up

Region-enriched R2: 2.421/0.00679

 0.965 - - 0.965 - - - Mlig455_050915 {REF} {Length: 1810} {TRANSSPLICED} {RNA1509_26844, RNA1509_35213} {RNA1310_16013.2, RNA1509_26844, RNA1509_35213} {RNA1509_26844, RNA1509_35213, RNA815_32730}
9. MligTC455_33603 147 3.07 Mlig455_040543, Mlig455_062092

Neo: -

Age: -

 SNED1 0.961 - - 0.961 - - -

Mlig455_040543 {REF} {Length: 3550} {Pfam: EGF-like domain [PF00008.29, score=43.8]; Delta serrate ligand [PF01414.21, score=41.1]; Calcium-binding EGF domain [PF07645.17, score=35.3]; Human growth factor-like EGF [PF12661.9, score=29.0]; EGF domain [PF12947.9, score=20.4]; EGF-like domain [PF07974.15, score=19.4]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=82.4, Expect=2e-15]; ENSG00000074181, NOTCH3, notch 3, [Score=82.0, Expect=3e-15]; ENSG00000188107, EYS, eyes shut homolog (Drosophila), [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=80.1, Expect=8e-15]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=79.7, Expect=9e-15]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=77.8, Expect=5e-14]} {Dmel: FBgn0000463, Dl, dorsal, [Score=83.2, Expect=5e-16]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=84.3, Expect=2e-16]} {Smed: dd_Smed_v6_6929_0_1, dd_Smed_v6_6929_0_1, [Score=88.2, Expect=3e-18]} {RNA1509_59016} {RNA1310_5151.2} {RNA815_5871}

Mlig455_062092 {REF} {Length: 4064} {Pfam: Delta serrate ligand [PF01414.21, score=39.8]; Calcium-binding EGF domain [PF07645.17, score=34.9]; EGF-like domain [PF00008.29, score=34.7]; Human growth factor-like EGF [PF12661.9, score=27.4]; EGF domain [PF12947.9, score=20.1]} {Human: ENSG00000162804, SNED1, sushi, nidogen and EGF like domains 1, [Score=82.8, Expect=1e-15]; ENSG00000188107, EYS, eyes shut homolog (Drosophila), [Score=82.4, Expect=4e-15]; ENSG00000074181, NOTCH3, notch 3, [Score=82.0, Expect=5e-15]} {Mouse: ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=85.5, Expect=3e-16]} {Dmel: FBgn0000463, Dl, dorsal, [Score=77.8, Expect=4e-14]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=85.5, Expect=1e-16]} {Smed: dd_Smed_v6_6929_0_1, dd_Smed_v6_6929_0_1, [Score=93.6, Expect=8e-20]} {RNA1509_59016} {RNA1310_17570} {RNA815_5871}
10. MligTC455_43201 71 1.49 Mlig455_004169, Mlig455_004193

Neo: -

Age: Down-Up-Up

 0.961 - - 0.961 - - -

Mlig455_004169 {REF} {Length: 1823} {Smed: dd_Smed_v6_19397_0_1, dd_Smed_v6_19397_0_1, [Score=74.3, Expect=2e-14]} {RNA1310_110906.1} {RNA815_65243}

Mlig455_004193 {REF} {Length: 1806} {Smed: dd_Smed_v6_19397_0_1, dd_Smed_v6_19397_0_1, [Score=73.9, Expect=2e-14]} {RNA1310_110906.1} {RNA815_65243}
11. MligTC455_16137 48 1 Mlig455_044854

Neo: -

Age: -

 CDPF1 0.957 - - - - 0.957 - Mlig455_044854 {REF} {Length: 653} {Pfam: Cysteine-rich domain [PF10170.11, score=92.4]} {Human: ENSG00000205643, CDPF1, cysteine rich DPF motif domain containing 1, [RH, Score=86.7, Expect=6e-23]} {Mouse: ENSMUSG00000064284, Cdpf1, cysteine rich, DPF motif domain containing 1, [RH, Score=84.7, Expect=2e-22]} {Dmel: FBgn0037611, CG11755, [RH, Score=62.4, Expect=2e-13]} {RNA1310_82550} {RNA815_48808}
12. MligTC455_42173 58 1.2 Mlig455_050213

Neo: -

Age: Down-Up-Down

 0.956 - - 0.956 - - - Mlig455_050213 {REF} {Length: 1348} {Pfam: Innexin [PF00876.20, score=176.0]} {Dmel: FBgn0004646, ogre, optic ganglion reduced, [Score=48.1, Expect=7e-06]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=129, Expect=3e-34]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=181, Expect=2e-52]} {RNA1509_10527} {RNA1310_14408} {RNA815_844.2}
13. MligTC455_29138 150 3.13 Mlig455_047030

Neo: -

Age: Up-Down-Up

 EFR3A 0.953 - - 0.953 - - - Mlig455_047030 {REF} {Length: 5267} {TRANSSPLICED} {Pfam: ZIP Zinc transporter [PF02535.24, score=66.2]} {Human: ENSG00000132294, EFR3A, EFR3 homolog A, [RH, Score=343, Expect=2e-103]; ENSG00000084710, EFR3B, EFR3 homolog B, [RH, Score=327, Expect=2e-97]} {Mouse: ENSMUSG00000015002, Efr3a, EFR3 homolog A, [Score=346, Expect=4e-104]} {Dmel: FBgn0086784, stmA, stambha A, [Score=315, Expect=4e-93]} {Celegans: WBGene00016311, C32D5.3, Protein EFR3 homolog, [Score=249, Expect=2e-69]} {Smed: dd_Smed_v6_3212_0_1, dd_Smed_v6_3212_0_1, [RH, Score=397, Expect=5e-123]} {RNA1509_14238} {RNA1310_2165.2} {RNA815_4536}
14. MligTC455_52262 145 3.02 Mlig455_055398

Neo: -

Age: -

 DHX9 0.953 - - 0.953 - - - Mlig455_055398 {REF} {Length: 4891} {Pfam: Double-stranded RNA binding motif [PF00035.28, score=73.1]; Helicase conserved C-terminal domain [PF00271.33, score=52.8]; Helicase associated domain (HA2) [PF04408.25, score=50.2]; Oligonucleotide/oligosaccharide-binding (OB)-fold [PF07717.18, score=39.1]; DEAD/DEAH box helicase [PF00270.31, score=30.5]} {Human: ENSG00000135829, DHX9, DExH-box helicase 9, [RH, Score=1137, Expect=0.0]} {Mouse: ENSMUSG00000042699, Dhx9, DEAH (Asp-Glu-Ala-His) box polypeptide 9, [RH, Score=1120, Expect=0.0]} {Dmel: FBgn0002774, mle, maleless, [RH, Score=1058, Expect=0.0]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [RH, Score=868, Expect=0.0]} {Smed: dd_Smed_v6_4815_0_1, dd_Smed_v6_4815_0_1, [RH, Score=1115, Expect=0.0]} {RNA1509_8352} {RNA1310_2204.1} {RNA815_3757}
15. MligTC455_25490 396 8.25 Mlig455_023544, Mlig455_023650

Neo: -

Age: -

 CEP104 0.951 - - 0.951 - - -

Mlig455_023544 {REF} {Length: 3493} {TRANSSPLICED} {Human: ENSG00000116198, CEP104, centrosomal protein 104, [Score=213, Expect=2e-58]} {Mouse: ENSMUSG00000039523, Cep104, centrosomal protein 104, [Score=203, Expect=4e-55]} {Dmel: FBgn0032800, CG10137, [Score=113, Expect=1e-25]} {Celegans: WBGene00015517, C06A8.8, [RH, Score=51.6, Expect=1e-06]} {Smed: dd_Smed_v6_10228_0_1, dd_Smed_v6_10228_0_1, [Score=226, Expect=1e-63]} {RNA1509_21402} {RNA1310_11973} {RNA815_5128}

Mlig455_023650 {REF} {Length: 3519} {TRANSSPLICED} {Human: ENSG00000116198, CEP104, centrosomal protein 104, [Score=209, Expect=4e-57]} {Mouse: ENSMUSG00000039523, Cep104, centrosomal protein 104, [Score=200, Expect=5e-54]} {Dmel: FBgn0032800, CG10137, [Score=116, Expect=1e-26]} {Celegans: WBGene00015517, C06A8.8, [RH, Score=50.4, Expect=2e-06]} {Smed: dd_Smed_v6_10228_0_1, dd_Smed_v6_10228_0_1, [Score=225, Expect=3e-63]} {RNA1509_21402} {RNA1310_11973, RNA1509_21402} {RNA1509_21402, RNA815_5128}
16. MligTC455_31659 24 0.5 Mlig455_023041, Mlig455_023088, Mlig455_023106, Mlig455_027760, Mlig455_038065, Mlig455_069767

Neo: Irradiation

Age: -

Region-enriched R8: 6.032/0.04137

 KIF20A, KIF20B 0.951 - - - - 0.951 -

Mlig455_023041 {REF} {Length: 5878} {Pfam: Kinesin motor domain [PF00225.25, score=173.4]} {Human: ENSG00000138182, KIF20B, kinesin family member 20B, [Score=168, Expect=1e-45]; ENSG00000112984, KIF20A, kinesin family member 20A, [Score=166, Expect=5e-45]} {Mouse: ENSMUSG00000003779, Kif20a, kinesin family member 20A, [Score=171, Expect=5e-47]; ENSMUSG00000024795, Kif20b, kinesin family member 20B, [Score=169, Expect=3e-46]} {Dmel: FBgn0011692, pav, pavarotti, [Score=134, Expect=2e-34]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=135, Expect=5e-35]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [Score=192, Expect=1e-54]} {RNA1509_31888} {RNA1310_1190} {RNA815_22519}

Mlig455_023088 {REF} {Length: 1580} {Pfam: Kinesin motor domain [PF00225.25, score=116.5]} {Human: ENSG00000112984, KIF20A, kinesin family member 20A, [Score=118, Expect=7e-30]} {Mouse: ENSMUSG00000003779, Kif20a, kinesin family member 20A, [Score=124, Expect=4e-32]} {Dmel: FBgn0011692, pav, pavarotti, [Score=106, Expect=5e-26]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=95.9, Expect=1e-22]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [Score=130, Expect=7e-35]} {RNA1509_36422} {RNA1310_5809.2} {RNA815_3599}

Mlig455_023106 {REF} {Length: 1238} {Pfam: Kinesin motor domain [PF00225.25, score=150.6]} {Human: ENSG00000112984, KIF20A, kinesin family member 20A, [Score=143, Expect=1e-36]} {Mouse: ENSMUSG00000003779, Kif20a, kinesin family member 20A, [Score=150, Expect=4e-39]} {Dmel: FBgn0003545, sub, subito, [Score=118, Expect=2e-28]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=108, Expect=3e-25]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [Score=152, Expect=5e-40]} {RNA1509_36422} {RNA1310_5809.1} {RNA815_3599}

Mlig455_027760 {REF} {Length: 404} {Pfam: Kinesin motor domain [PF00225.25, score=114.1]} {Human: ENSG00000112984, KIF20A, kinesin family member 20A, [Score=117, Expect=5e-31]} {Mouse: ENSMUSG00000003779, Kif20a, kinesin family member 20A, [Score=122, Expect=6e-33]} {Dmel: FBgn0011692, pav, pavarotti, [Score=99.0, Expect=7e-25]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=94.7, Expect=2e-23]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [Score=127, Expect=5e-35]} {RNA1509_36422} {RNA1310_5809.2} {RNA815_3599}

Mlig455_038065 {REF} {Length: 384} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=25.6]; Zinc knuckle [PF00098.25, score=21.5]} {RNA1509_31888} {RNA1310_9755.2} {RNA815_47299}

Mlig455_069767 {REF} {Length: 1502} {Pfam: Kinesin motor domain [PF00225.25, score=129.1]} {Human: ENSG00000112984, KIF20A, kinesin family member 20A, [Score=150, Expect=5e-38]} {Mouse: ENSMUSG00000003779, Kif20a, kinesin family member 20A, [Score=150, Expect=2e-38]} {Dmel: FBgn0003545, sub, subito, [Score=111, Expect=1e-25]} {Celegans: WBGene00006974, zen-4, Kinesin-like protein, [Score=105, Expect=8e-24]} {Smed: dd_Smed_v6_13972_0_2, dd_Smed_v6_13972_0_2, [Score=160, Expect=3e-42]} {RNA1509_36422} {RNA1310_15646.2} {RNA815_3599}
17. MligTC455_35146 79 1.65 Mlig455_041956

Neo: -

Age: -

 CAPN8 0.951 - - 0.951 - - - Mlig455_041956 {REF} {Length: 5164} {Pfam: Calpain family cysteine protease [PF00648.23, score=313.1]; Calpain large subunit, domain III [PF01067.24, score=120.5]; EF-hand domain pair [PF13499.8, score=24.7]; EF hand [PF00036.34, score=20.7]; EF-hand domain [PF13405.8, score=20.4]} {Human: ENSG00000203697, CAPN8, calpain 8, [Score=469, Expect=7e-156]; ENSG00000135773, CAPN9, calpain 9, [Score=451, Expect=8e-149]; ENSG00000092529, CAPN3, calpain 3, [Score=451, Expect=3e-148]} {Mouse: ENSMUSG00000038599, Capn8, calpain 8, [Score=460, Expect=2e-152]; ENSMUSG00000079110, Capn3, calpain 3, [Score=451, Expect=2e-148]; ENSMUSG00000031981, Capn9, calpain 9, [Score=450, Expect=1e-148]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=476, Expect=3e-156]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=358, Expect=7e-113]} {Smed: dd_Smed_v6_1971_0_2, dd_Smed_v6_1971_0_2, [Score=586, Expect=0.0]} {RNA1509_47386} {RNA1310_7426} {RNA815_43538}

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