TomoSeq data search

Data search

Results for MligTC455_25640

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25640

36

0.74

Mlig455_019027

Neo: -

Age: -

ANK2

Mlig455_019027 {REF} {Length: 6400} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=154.0]; Ankyrin repeats (many copies) [PF13637.8, score=131.3]; Ankyrin repeat [PF00023.32, score=85.0]; Ankyrin repeat [PF13606.8, score=84.5]; Ankyrin repeats (many copies) [PF13857.8, score=82.0]; TRAF-type zinc finger [PF02176.20, score=35.0]; Seven in absentia protein family [PF03145.18, score=28.5]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=179, Expect=2e-44]; ENSG00000029534, ANK1, ankyrin 1, [Score=177, Expect=6e-44]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=172, Expect=2e-42]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=167, Expect=9e-41]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=166, Expect=9e-41]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=154, Expect=8e-37]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=167, Expect=3e-41]} {Smed: dd_Smed_v6_2072_0_5, dd_Smed_v6_2072_0_5, [Score=156, Expect=8e-38]} {RNA1509_8520} {RNA1310_13359.1} {RNA815_6567}

Cumulative graph for MligTC455_25640

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.29	1.228	0.99983	1.00000
RegionR2	0.351	1.228	0.76075	1.00000
RegionR3	1.187	1.228	0.35842	0.89380
RegionR4	0.879	1.228	0.50329	0.83019
RegionR5	0.637	1.228	0.50354	0.86687
RegionR6	2.076	1.228	0.13607	0.66257
RegionR7	-1.458	1.228	0.99952	1.00000
RegionR8	-1.381	1.228	0.99983	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.306	1.228	0.99994	1.00000
RegenerationR2	1.385	1.228	0.36864	0.79447
RegenerationR3	2.035	1.228	0.11376	0.52787
RegenerationR4	-0.297	1.228	0.86037	1.00000
RegenerationR5	2.222	1.228	0.04445	0.34542
RegenerationR6	2.124	1.228	0.06776	0.32652
RegenerationBL	4.245	1.228	0.02517	0.17465
RegenerationTP	0.284	1.228	1.00000	1.00000

Genes with expression patterns similar to MligTC455_25640

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25640	36	0.74	Mlig455_019027	Neo: - Age: -	ANK2	4	-	1.000	-	1.000	1.000	1.000	Mlig455_019027 {REF} {Length: 6400} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=154.0]; Ankyrin repeats (many copies) [PF13637.8, score=131.3]; Ankyrin repeat [PF00023.32, score=85.0]; Ankyrin repeat [PF13606.8, score=84.5]; Ankyrin repeats (many copies) [PF13857.8, score=82.0]; TRAF-type zinc finger [PF02176.20, score=35.0]; Seven in absentia protein family [PF03145.18, score=28.5]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=179, Expect=2e-44]; ENSG00000029534, ANK1, ankyrin 1, [Score=177, Expect=6e-44]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=172, Expect=2e-42]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=167, Expect=9e-41]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=166, Expect=9e-41]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=154, Expect=8e-37]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=167, Expect=3e-41]} {Smed: dd_Smed_v6_2072_0_5, dd_Smed_v6_2072_0_5, [Score=156, Expect=8e-38]} {RNA1509_8520} {RNA1310_13359.1} {RNA815_6567}
2.	MligTC455_25641	49	1.02	Mlig455_055675	Neo: - Age: -	ANK1	3.743	-	0.938	-	0.962	0.876	0.967	Mlig455_055675 {REF} {Length: 4132} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=135.4]; Ankyrin repeats (many copies) [PF13637.8, score=134.8]; Ankyrin repeat [PF00023.32, score=94.0]; Ankyrin repeat [PF13606.8, score=91.5]; Ankyrin repeats (many copies) [PF13857.8, score=76.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=144, Expect=1e-37]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=140, Expect=5e-36]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=134, Expect=3e-34]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=142, Expect=4e-37]} {Smed: dd_Smed_v6_2072_0_5, dd_Smed_v6_2072_0_5, [Score=122, Expect=2e-30]} {RNA1509_45640} {RNA1310_13359.1} {RNA815_36354}
3.	MligTC455_47043	20	0.42	Mlig455_050126	Neo: - Age: -	ORC5	0.988	-	-	-	0.988	-	-	Mlig455_050126 {REF} {Length: 1766} {Pfam: Origin recognition complex (ORC) subunit 5 C-terminus [PF14630.8, score=58.3]; AAA ATPase domain [PF13191.8, score=40.7]; AAA domain [PF13401.8, score=23.8]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.5]} {Human: ENSG00000164815, ORC5, origin recognition complex subunit 5, [Score=50.4, Expect=3e-06]} {RNA1310_68186} {RNA815_35692.1}
4.	MligTC455_13190	29	0.61	Mlig455_000845	Neo: - Age: -		0.986	-	-	-	0.986	-	-	Mlig455_000845 {REF} {Length: 942} {NoTransDecoderORF} {RNA1509_5595} {RNA1310_85669} {RNA815_47511}
5.	MligTC455_39367	26	0.54	Mlig455_048186	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_048186 {REF} {Length: 2448} {TRANSSPLICED} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=26.8]} {RNA1509_15614} {RNA1310_52319.1} {RNA815_17448}
6.	MligTC455_34690	26	0.54	Mlig455_001726, Mlig455_038637	Neo: - Age: -		0.969	-	-	-	0.969	-	-	Mlig455_001726 {REF} {Length: 2050} {NoTransDecoderORF} {RNA1509_45595} {RNA1310_85276} {RNA815_7856.1} Mlig455_038637 {REF} {Length: 1643} {NoTransDecoderORF} {RNA1310_77880}
7.	MligTC455_15892	64	1.33	Mlig455_041852	Neo: - Age: -		0.966	-	-	-	0.966	-	-	Mlig455_041852 {REF} {Length: 906} {Pfam: Domain of unknown function (DUF1724) [PF08350.12, score=23.7]; Bacterial AMP nucleoside phosphorylase N-terminus [PF10423.11, score=19.1]} {RNA1509_8496} {RNA1310_11746} {RNA815_63261}
8.	MligTC455_26893	269	5.61	Mlig455_013044	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_013044 {REF} {Length: 350} {NoTransDecoderORF} {RNA1509_43421} {RNA1310_7853.1} {RNA815_5910}
9.	MligTC455_13277	44	0.92	Mlig455_024664	Neo: - Age: -	KCNIP3	0.962	-	-	-	0.962	-	-	Mlig455_024664 {REF} {Length: 2369} {Pfam: EF-hand domain pair [PF13499.8, score=66.9]; EF hand [PF00036.34, score=57.1]; EF-hand domain [PF13405.8, score=50.7]; EF hand [PF13202.8, score=40.6]; EF-hand domain pair [PF13833.8, score=34.9]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=176, Expect=3e-54]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=171, Expect=2e-52]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=171, Expect=2e-52]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=170, Expect=5e-52]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=173, Expect=2e-53]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=171, Expect=1e-52]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=170, Expect=2e-52]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=168, Expect=2e-51]} {Dmel: FBgn0265595, CG44422, [RH, Score=171, Expect=4e-51]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=142, Expect=8e-42]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [RH, Score=179, Expect=7e-56]} {RNA1509_50772} {RNA1310_28708} {RNA815_34493}
10.	MligTC455_23056	88	1.84	Mlig455_034100, Mlig455_034111	Neo: - Age: - Region-enriched R7: 3.593/0.02491	KCNV2	0.958	-	-	-	0.958	-	-	Mlig455_034100 {REF} {Length: 3594} {Pfam: Ion channel [PF07885.18, score=55.3]; Ligand-gated ion channel [PF00060.28, score=32.0]; Ion transport protein [PF00520.33, score=30.1]} {Human: ENSG00000168263, KCNV2, potassium voltage-gated channel modifier subfamily V member 2, [Score=54.7, Expect=4e-07]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0003429, slo, slowpoke, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=53.5, Expect=3e-07]} {RNA1310_25965.1} {RNA815_19497} Mlig455_034111 {REF} {Length: 3636} {Pfam: Ion channel [PF07885.18, score=55.3]; Ligand-gated ion channel [PF00060.28, score=32.0]; Ion transport protein [PF00520.33, score=30.1]} {Human: ENSG00000168263, KCNV2, potassium voltage-gated channel modifier subfamily V member 2, [Score=54.7, Expect=4e-07]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0003429, slo, slowpoke, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=53.5, Expect=3e-07]} {RNA1310_25965.1} {RNA815_19497}
11.	MligTC455_47042	396	8.25	Mlig455_033600, Mlig455_033705	Neo: Neoblast, stringent Age: -	ORC5	0.958	-	-	-	0.958	-	-	Mlig455_033600 {REF} {Length: 1452} {Pfam: Origin recognition complex (ORC) subunit 5 C-terminus [PF14630.8, score=33.2]} {RNA1310_72659} {RNA815_35692.2} Mlig455_033705 {REF} {Length: 2942} {Pfam: Origin recognition complex (ORC) subunit 5 C-terminus [PF14630.8, score=81.6]; AAA ATPase domain [PF13191.8, score=40.1]; AAA domain [PF13401.8, score=22.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.2]} {Human: ENSG00000164815, ORC5, origin recognition complex subunit 5, [RH, Score=74.7, Expect=5e-14]} {Dmel: FBgn0015271, Orc5, Origin recognition complex subunit 5, [Score=66.2, Expect=2e-11]} {RNA1310_42091} {RNA815_35692.1}
12.	MligTC455_38511	431	8.97	Mlig455_014820	Neo: - Age: - Region-enriched R4: 1.490/0.03205	PHKB	0.956	-	-	-	-	0.956	-	Mlig455_014820 {REF} {Length: 4982} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 15 [PF00723.23, score=262.7]; Phosphorylase b kinase C-terminal domain [PF19292.1, score=57.4]} {Human: ENSG00000102893, PHKB, phosphorylase kinase regulatory subunit beta, [RH, Score=724, Expect=0.0]} {Mouse: ENSMUSG00000036879, Phkb, phosphorylase kinase beta, [RH, Score=713, Expect=0.0]} {Dmel: FBgn0031995, CG8475, [RH, Score=721, Expect=0.0]} {Celegans: WBGene00022059, Y67D8A.2, [RH, Score=638, Expect=0.0]} {Smed: dd_Smed_v6_3657_0_1, dd_Smed_v6_3657_0_1, [RH, Score=934, Expect=0.0]} {RNA1509_31508, RNA1509_42738, RNA1509_48358, RNA1509_52168, RNA1509_52652} {RNA1310_3293, RNA1509_31508, RNA1509_42738, RNA1509_48358, RNA1509_52168, RNA1509_52652} {RNA1509_31508, RNA1509_42738, RNA1509_48358, RNA1509_52168, RNA1509_52652, RNA815_960}
13.	MligTC455_30216	2652	55.26	Mlig455_065705	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.400		0.953	-	-	-	0.953	-	-	Mlig455_065705 {REF} {Length: 912} {RNA1509_12100} {RNA1310_44162} {RNA815_19510.1}
14.	MligTC455_32450	834	17.38	Mlig455_043998	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.343 Region-enriched R4: 2.351/0.00100 Region-enriched R3: 1.634/0.01046	ACHE	0.953	-	-	-	0.953	-	-	Mlig455_043998 {REF} {Length: 6344} {Pfam: Carboxylesterase family [PF00135.30, score=510.5]} {Human: ENSG00000087085, ACHE, acetylcholinesterase (Cartwright blood group), [Score=206, Expect=1e-55]} {Mouse: ENSMUSG00000023328, Ache, acetylcholinesterase, [Score=187, Expect=2e-49]; ENSMUSG00000027792, Bche, butyrylcholinesterase, [Score=181, Expect=3e-47]} {Dmel: FBgn0029690, CG6414, [RH, Score=172, Expect=1e-44]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [Score=182, Expect=7e-48]} {Smed: dd_Smed_v6_4935_0_1, dd_Smed_v6_4935_0_1, [Score=179, Expect=2e-46]} {RNA1509_1740, RNA1509_51083} {RNA1310_963.1, RNA1509_51083} {RNA1509_51083, RNA815_836}
15.	MligTC455_14921	9	0.19	Mlig455_036683	Neo: - Age: -		0.95	-	-	-	0.950	-	-	Mlig455_036683 {REF} {Length: 701} {NoTransDecoderORF} {RNA1509_14379} {RNA1310_111377} {RNA815_5529}

Berezikov Lab - 2020-2021 © ERIBA