Data search
Results for MligTC455_23056
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_23056 | 88 | 1.84 | Mlig455_034100, Mlig455_034111 | Neo: - Age: - Region-enriched R7: 3.593/0.02491 |
KCNV2 | Mlig455_034100 {REF} {Length: 3594} {Pfam: Ion channel [PF07885.18, score=55.3]; Ligand-gated ion channel [PF00060.28, score=32.0]; Ion transport protein [PF00520.33, score=30.1]} {Human: ENSG00000168263, KCNV2, potassium voltage-gated channel modifier subfamily V member 2, [Score=54.7, Expect=4e-07]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0003429, slo, slowpoke, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=53.5, Expect=3e-07]} {RNA1310_25965.1} {RNA815_19497} Mlig455_034111 {REF} {Length: 3636} {Pfam: Ion channel [PF07885.18, score=55.3]; Ligand-gated ion channel [PF00060.28, score=32.0]; Ion transport protein [PF00520.33, score=30.1]} {Human: ENSG00000168263, KCNV2, potassium voltage-gated channel modifier subfamily V member 2, [Score=54.7, Expect=4e-07]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0003429, slo, slowpoke, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=53.5, Expect=3e-07]} {RNA1310_25965.1} {RNA815_19497} |
Cumulative graph for MligTC455_23056
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.327 | 1.706 | 0.99961 | 1.00000 | |
| RegionR2 | 1.135 | 1.706 | 0.38877 | 0.78352 | |
| RegionR3 | 1.381 | 1.706 | 0.23896 | 0.78044 | |
| RegionR4 | -0.89 | 1.706 | 0.92600 | 1.00000 | |
| RegionR5 | 0.279 | 1.706 | 0.66833 | 1.00000 | |
| RegionR6 | 1.97 | 1.706 | 0.07888 | 0.51941 | |
| RegionR7 | 3.593 | 1.706 | 0.00064 | 0.02491 | |
| RegionR8 | -4.141 | 1.706 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.134 | 1.706 | 0.99998 | 1.00000 | |
| RegenerationR2 | -0.842 | 1.706 | 0.35708 | 0.78680 | |
| RegenerationR3 | -1.641 | 1.706 | 0.11123 | 0.52459 | |
| RegenerationR4 | 0.296 | 1.706 | 0.80301 | 0.98731 | |
| RegenerationR5 | 0.47 | 1.706 | 0.61233 | 0.91493 | |
| RegenerationR6 | 0.819 | 1.706 | 0.33646 | 0.68282 | |
| RegenerationBL | -0.309 | 1.706 | 0.85359 | 1.00000 | |
| RegenerationTP | 1.985 | 1.706 | 0.34285 | 0.78568 |
Genes with expression patterns similar to MligTC455_23056
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_23056 | 88 | 1.84 | Mlig455_034100, Mlig455_034111 | Neo: - Age: - Region-enriched R7: 3.593/0.02491 |
KCNV2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_034100 {REF} {Length: 3594} {Pfam: Ion channel [PF07885.18, score=55.3]; Ligand-gated ion channel [PF00060.28, score=32.0]; Ion transport protein [PF00520.33, score=30.1]} {Human: ENSG00000168263, KCNV2, potassium voltage-gated channel modifier subfamily V member 2, [Score=54.7, Expect=4e-07]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0003429, slo, slowpoke, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=53.5, Expect=3e-07]} {RNA1310_25965.1} {RNA815_19497} Mlig455_034111 {REF} {Length: 3636} {Pfam: Ion channel [PF07885.18, score=55.3]; Ligand-gated ion channel [PF00060.28, score=32.0]; Ion transport protein [PF00520.33, score=30.1]} {Human: ENSG00000168263, KCNV2, potassium voltage-gated channel modifier subfamily V member 2, [Score=54.7, Expect=4e-07]; ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=52.8, Expect=2e-06]} {Mouse: ENSMUSG00000047298, Kcnv2, potassium channel, subfamily V, member 2, [Score=57.0, Expect=4e-08]} {Dmel: FBgn0003429, slo, slowpoke, [Score=50.4, Expect=4e-06]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_9740_0_1, dd_Smed_v6_9740_0_1, [Score=53.5, Expect=3e-07]} {RNA1310_25965.1} {RNA815_19497} |
| 2. | MligTC455_15892 | 64 | 1.33 | Mlig455_041852 | Neo: - Age: - |
0.996 | - | - | - | 0.996 | - | - | Mlig455_041852 {REF} {Length: 906} {Pfam: Domain of unknown function (DUF1724) [PF08350.12, score=23.7]; Bacterial AMP nucleoside phosphorylase N-terminus [PF10423.11, score=19.1]} {RNA1509_8496} {RNA1310_11746} {RNA815_63261} | |
| 3. | MligTC455_25641 | 49 | 1.02 | Mlig455_055675 | Neo: - Age: - |
ANK1 | 0.993 | - | - | - | 0.993 | - | - | Mlig455_055675 {REF} {Length: 4132} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=135.4]; Ankyrin repeats (many copies) [PF13637.8, score=134.8]; Ankyrin repeat [PF00023.32, score=94.0]; Ankyrin repeat [PF13606.8, score=91.5]; Ankyrin repeats (many copies) [PF13857.8, score=76.8]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=152, Expect=5e-40]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=144, Expect=1e-37]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=140, Expect=5e-36]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=134, Expect=3e-34]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=142, Expect=4e-37]} {Smed: dd_Smed_v6_2072_0_5, dd_Smed_v6_2072_0_5, [Score=122, Expect=2e-30]} {RNA1509_45640} {RNA1310_13359.1} {RNA815_36354} |
| 4. | MligTC455_13277 | 44 | 0.92 | Mlig455_024664 | Neo: - Age: - |
KCNIP3 | 0.985 | - | - | - | 0.985 | - | - | Mlig455_024664 {REF} {Length: 2369} {Pfam: EF-hand domain pair [PF13499.8, score=66.9]; EF hand [PF00036.34, score=57.1]; EF-hand domain [PF13405.8, score=50.7]; EF hand [PF13202.8, score=40.6]; EF-hand domain pair [PF13833.8, score=34.9]} {Human: ENSG00000115041, KCNIP3, potassium voltage-gated channel interacting protein 3, [Score=176, Expect=3e-54]; ENSG00000185774, KCNIP4, potassium voltage-gated channel interacting protein 4, [Score=171, Expect=2e-52]; ENSG00000120049, KCNIP2, potassium voltage-gated channel interacting protein 2, [Score=171, Expect=2e-52]; ENSG00000182132, KCNIP1, potassium voltage-gated channel interacting protein 1, [Score=170, Expect=5e-52]} {Mouse: ENSMUSG00000079056, Kcnip3, Kv channel interacting protein 3, calsenilin, [Score=173, Expect=2e-53]; ENSMUSG00000029088, Kcnip4, Kv channel interacting protein 4, [Score=171, Expect=1e-52]; ENSMUSG00000025221, Kcnip2, Kv channel-interacting protein 2, [Score=170, Expect=2e-52]; ENSMUSG00000053519, Kcnip1, Kv channel-interacting protein 1, [Score=168, Expect=2e-51]} {Dmel: FBgn0265595, CG44422, [RH, Score=171, Expect=4e-51]} {Celegans: WBGene00003563, ncs-1, Neuronal calcium sensor 1, [Score=142, Expect=8e-42]} {Smed: dd_Smed_v6_9727_0_1, dd_Smed_v6_9727_0_1, [RH, Score=179, Expect=7e-56]} {RNA1509_50772} {RNA1310_28708} {RNA815_34493} |
| 5. | MligTC455_05223 | 265 | 5.51 | Mlig455_011864, Mlig455_011890, Mlig455_013145 | Neo: - Age: - |
0.975 | - | - | - | - | - | 0.975 | Mlig455_011864 {REF} {Length: 1292} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=27.2]} {RNA1310_39203} Mlig455_011890 {REF} {Length: 1292} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=27.2]} {RNA1310_39203} Mlig455_013145 {REF} {Length: 2824} {RNA1509_21617, RNA1509_8547} {RNA1310_39203, RNA1509_21617} {RNA1509_21617, RNA815_11946.1} |
|
| 6. | MligTC455_27441 | 61 | 1.28 | Mlig455_054526, Mlig455_055380, Mlig455_055445 | Neo: - Age: - |
LRFN4 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_054526 {REF} {Length: 2836} {Pfam: Leucine rich repeat [PF13855.8, score=58.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=42.2]; Transposase (partial DDE domain) [PF01359.20, score=30.0]; Leucine-rich repeat [PF14580.8, score=25.7]; Immunoglobulin domain [PF13927.8, score=22.0]} {Human: ENSG00000173621, LRFN4, leucine rich repeat and fibronectin type III domain containing 4, [Score=76.6, Expect=3e-14]} {Mouse: ENSMUSG00000023176, Cpn2, carboxypeptidase N, polypeptide 2, [Score=72.8, Expect=7e-13]; ENSMUSG00000045045, Lrfn4, leucine rich repeat and fibronectin type III domain containing 4, [Score=70.1, Expect=4e-12]} {Dmel: FBgn0243486, rdo, reduced ocelli, [Score=51.6, Expect=2e-06]} {Smed: dd_Smed_v6_10393_0_1, dd_Smed_v6_10393_0_1, [RH, Score=101, Expect=2e-22]} {RNA1310_13170.1} {RNA815_38727} Mlig455_055380 {REF} {Length: 8142} {Pfam: Leucine rich repeat [PF13855.8, score=57.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=42.0]; Transposase (partial DDE domain) [PF01359.20, score=40.1]; Leucine-rich repeat [PF14580.8, score=25.5]; Immunoglobulin domain [PF13927.8, score=22.5]} {Human: ENSG00000173621, LRFN4, leucine rich repeat and fibronectin type III domain containing 4, [Score=72.4, Expect=9e-13]} {Mouse: ENSMUSG00000023176, Cpn2, carboxypeptidase N, polypeptide 2, [Score=66.6, Expect=5e-11]; ENSMUSG00000045045, Lrfn4, leucine rich repeat and fibronectin type III domain containing 4, [Score=65.9, Expect=1e-10]} {Dmel: FBgn0036494, Toll-6, [Score=53.5, Expect=7e-07]} {Smed: dd_Smed_v6_10393_0_1, dd_Smed_v6_10393_0_1, [RH, Score=101, Expect=3e-22]} {RNA1509_31244, RNA1509_32043} {RNA1310_13170.1, RNA1509_32043} {RNA1509_32043, RNA815_38727} Mlig455_055445 {REF} {Length: 1796} {RNA1310_102243} |
| 7. | MligTC455_27816 | 81 | 1.68 | Mlig455_008411 | Neo: - Age: - |
0.962 | - | - | - | 0.962 | - | - | Mlig455_008411 {REF} {Length: 3143} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=22.1]; Zinc knuckle [PF00098.25, score=21.7]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} | |
| 8. | MligTC455_25640 | 36 | 0.74 | Mlig455_019027 | Neo: - Age: - |
ANK2 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_019027 {REF} {Length: 6400} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=154.0]; Ankyrin repeats (many copies) [PF13637.8, score=131.3]; Ankyrin repeat [PF00023.32, score=85.0]; Ankyrin repeat [PF13606.8, score=84.5]; Ankyrin repeats (many copies) [PF13857.8, score=82.0]; TRAF-type zinc finger [PF02176.20, score=35.0]; Seven in absentia protein family [PF03145.18, score=28.5]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=179, Expect=2e-44]; ENSG00000029534, ANK1, ankyrin 1, [Score=177, Expect=6e-44]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=172, Expect=2e-42]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=167, Expect=9e-41]; ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=166, Expect=9e-41]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=154, Expect=8e-37]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=167, Expect=3e-41]} {Smed: dd_Smed_v6_2072_0_5, dd_Smed_v6_2072_0_5, [Score=156, Expect=8e-38]} {RNA1509_8520} {RNA1310_13359.1} {RNA815_6567} |
| 9. | MligTC455_25675 | 122 | 2.55 | Mlig455_058490 | Neo: - Age: - |
PUS1 | 0.958 | - | - | - | 0.958 | - | - | Mlig455_058490 {REF} {Length: 2579} {TRANSSPLICED} {Pfam: tRNA pseudouridine synthase [PF01416.22, score=47.6]} {Human: ENSG00000177192, PUS1, pseudouridylate synthase 1, [Score=208, Expect=1e-63]} {Mouse: ENSMUSG00000029507, Pus1, pseudouridine synthase 1, [Score=209, Expect=7e-64]} {Dmel: FBgn0038811, PUS1, pseudouridylate synthase 1, [Score=204, Expect=5e-62]} {Celegans: WBGene00004248, pus-1, tRNA pseudouridine synthase, [Score=185, Expect=8e-55]} {Smed: dd_Smed_v6_7557_0_1, dd_Smed_v6_7557_0_1, [Score=235, Expect=8e-75]} {RNA1509_36652} {RNA1310_11912} {RNA815_6183.1} |
| 10. | MligTC455_33718 | 27 | 0.56 | Mlig455_067978 | Neo: - Age: - |
0.957 | - | - | - | 0.957 | - | - | Mlig455_067978 {REF} {Length: 1471} {RNA1509_34308} {RNA1310_37957.1} {RNA815_29846} | |
| 11. | MligTC455_06794 | 27 | 0.56 | Mlig455_053654 | Neo: - Age: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_053654 {REF} {Length: 543} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=26.6]; Protein of unknown function (DUF445) [PF04286.14, score=26.0]} | |
| 12. | MligTC455_52160 | 52 | 1.09 | Mlig455_034427 | Neo: - |
CASP9 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_034427 {REF} {Length: 1440} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=93.9]} {Human: ENSG00000132906, CASP9, caspase 9, [Score=112, Expect=3e-28]} {Mouse: ENSMUSG00000029863, Casp2, caspase 2, [Score=107, Expect=7e-26]; ENSMUSG00000028914, Casp9, caspase 9, [Score=104, Expect=6e-25]} {Dmel: FBgn0010501, Dcp-1, Death caspase-1, [Score=87.0, Expect=2e-19]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=122, Expect=1e-32]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=91.3, Expect=1e-21]} {RNA1310_52425} {RNA815_43239} |
| 13. | MligTC455_18325 | 66 | 1.38 | Mlig455_027680 | Neo: - Age: Up-Down-Down |
MED23 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_027680 {REF} {Length: 5186} {TRANSSPLICED} {Pfam: Mediator complex subunit 23 [PF11573.10, score=275.4]} {Human: ENSG00000112282, MED23, mediator complex subunit 23, [RH, Score=173, Expect=5e-43]} {Mouse: ENSMUSG00000019984, Med23, mediator complex subunit 23, [RH, Score=167, Expect=3e-41]} {Dmel: FBgn0034795, MED23, Mediator complex subunit 23, [RH, Score=201, Expect=6e-52]} {Smed: dd_Smed_v6_8836_0_1, dd_Smed_v6_8836_0_1, [RH, Score=103, Expect=5e-22]} {RNA1509_13212} {RNA1310_1604} {RNA815_2253} |
| 14. | MligTC455_13190 | 29 | 0.61 | Mlig455_000845 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_000845 {REF} {Length: 942} {NoTransDecoderORF} {RNA1509_5595} {RNA1310_85669} {RNA815_47511} |