TomoSeq data search

Data search

Results for MligTC455_25655

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25655	81	1.69	Mlig455_069078	Neo: - Age: -		Mlig455_069078 {REF} {Length: 205} {NoTransDecoderORF} {RNA1310_7131} {RNA815_8935}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_25655

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.453	1.643	0.89959	1.00000
RegionR2	0.894	1.643	0.35349	0.74742
RegionR3	-0.284	1.643	0.81132	1.00000
RegionR4	0.607	1.643	0.53675	0.85968
RegionR5	-1.643	1.643	0.27017	0.59468
RegionR6	-0.62	1.643	0.61836	1.00000
RegionR7	1.274	1.643	0.25789	0.88464
RegionR8	0.226	1.643	0.89492	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-3.775	1.643	0.65091	1.00000
RegenerationR2	-0.486	1.643	0.41722	0.82555
RegenerationR3	-1.44	1.643	0.13880	0.56498
RegenerationR4	-0.649	1.643	0.44504	0.83936
RegenerationR5	-0.313	1.643	0.79705	0.98778
RegenerationR6	0.398	1.643	0.67501	0.91136
RegenerationBL	0.748	1.643	0.47541	0.84125
RegenerationTP	0.723	1.643	0.53363	0.92302

Genes with expression patterns similar to MligTC455_25655

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25655	81	1.69	Mlig455_069078	Neo: - Age: -		5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_069078 {REF} {Length: 205} {NoTransDecoderORF} {RNA1310_7131} {RNA815_8935}
2.	MligTC455_25654	389	8.11	Mlig455_000129, Mlig455_027212, Mlig455_028212, Mlig455_028213, Mlig455_028214, Mlig455_039873, Mlig455_064984	Neo: - Age: - Region-enriched R4: 2.312/0.04499		2.753	0.996	-	0.872	0.885	-	-	Mlig455_000129 {REF} {Length: 1124} {Celegans: WBGene00007723, C25F9.2, [Score=62.0, Expect=8e-11]} {RNA1310_7131} {RNA815_8935} Mlig455_027212 {REF} {Length: 2742} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=139.5]} {Celegans: WBGene00007723, C25F9.2, [Score=313, Expect=4e-91]} {RNA1310_7131} {RNA815_8935} Mlig455_028212 {REF} {Length: 638} {NoTransDecoderORF} {RNA1509_31372} {RNA1310_7131} {RNA815_8935} Mlig455_028213 {REF} {Length: 1119} {Celegans: WBGene00007723, C25F9.2, [Score=78.2, Expect=1e-16]} {RNA1310_7131} {RNA815_8935} Mlig455_028214 {REF} {Length: 1116} {Celegans: WBGene00007723, C25F9.2, [Score=78.2, Expect=1e-16]} {RNA1310_7131} {RNA815_8935} Mlig455_039873 {REF} {Length: 3987} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=89.9]} {Celegans: WBGene00007723, C25F9.2, [Score=291, Expect=4e-82]} {RNA1310_7131} {RNA815_8935} Mlig455_064984 {REF} {Length: 2969} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=136.0]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=373, Expect=3e-111]} {RNA1310_7131} {RNA815_8935}
3.	MligTC455_34892	372	7.75	Mlig455_064967	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.604 Region-enriched R8: 3.123/0.00904	CYP2J2	1.716	0.759	-	-	-	-	0.957	Mlig455_064967 {REF} {Length: 3245} {Pfam: Cytochrome P450 [PF00067.24, score=299.4]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=261, Expect=7e-81]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [RH, Score=276, Expect=9e-87]; ENSMUSG00000081362, Cyp2j7, cytochrome P450, family 2, subfamily j, polypeptide 7, [RH, Score=268, Expect=2e-83]; ENSMUSG00000066097, Cyp2j11, cytochrome P450, family 2, subfamily j, polypeptide 11, [RH, Score=267, Expect=2e-83]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=186, Expect=2e-52]} {Celegans: WBGene00016860, cyp-33C9, CYtochrome P450 family, [Score=226, Expect=4e-68]} {Smed: dd_Smed_v6_2351_0_2, dd_Smed_v6_2351_0_2, [Score=263, Expect=3e-82]} {RNA1509_38384, RNA1509_39728, RNA1509_51765} {RNA1310_10949.2, RNA1509_38384, RNA1509_39728, RNA1509_51765} {RNA1509_38384, RNA1509_39728, RNA1509_51765, RNA815_7159}
4.	MligTC455_33477	151	3.14	Mlig455_009439, Mlig455_026618	Neo: - Age: Down-Up-Down	ZC3H7A	1.71	-	-	-	-	0.956	0.754	Mlig455_009439 {REF} {Length: 6380} {Human: ENSG00000122299, ZC3H7A, zinc finger CCCH-type containing 7A, [RH, Score=51.2, Expect=1e-05]} {RNA1509_8439} {RNA1310_1034.1} {RNA815_502.1} Mlig455_026618 {REF} {Length: 1033} {RNA1509_42818} {RNA1310_58068} {RNA815_43771}
5.	MligTC455_45968	43	0.89	Mlig455_058916	Neo: - Age: -		0.97	-	-	-	-	-	0.970	Mlig455_058916 {REF} {Length: 3026} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=53.9]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=29.4]} {Smed: dd_Smed_v6_27761_0_1, dd_Smed_v6_27761_0_1, [RH, Score=105, Expect=7e-25]} {RNA1310_38706}
6.	MligTC455_14402	11	0.22	Mlig455_011148	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_011148 {REF} {Length: 418} {NoTransDecoderORF} {RNA1509_36286} {RNA1310_44724} {RNA815_44450}
7.	MligTC455_09829	23	0.49	Mlig455_020089	Neo: - Age: Down-Up-Down		0.963	-	-	-	-	-	0.963	Mlig455_020089 {REF} {Length: 2399} {TRANSSPLICED} {RNA1310_22138} {RNA815_46507}
8.	MligTC455_10064	68	1.41	Mlig455_029458, Mlig455_029482	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_029458 {REF} {Length: 1576} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=28.7]} {RNA1310_20120.1} {RNA815_50604} Mlig455_029482 {REF} {Length: 3696} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=29.0]} {RNA1310_20120.1} {RNA815_30795}
9.	MligTC455_49364	19	0.4	Mlig455_052869	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_052869 {REF} {Length: 116} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30132} {RNA1310_6179.1} {RNA815_3037}
10.	MligTC455_10223	8	0.17	Mlig455_049591	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_049591 {REF} {Length: 1460} {RNA1509_40570} {RNA1310_115929} {RNA815_27821}
11.	MligTC455_23946	219	4.57	Mlig455_044344	Neo: - Age: - Region-enriched R8: 3.871/0.00002 Region-enriched R7: 3.585/0.00000 Regeneration-downregulated BL: -7.362 Regeneration-depleted BL: -7.362		0.956	-	-	-	-	-	0.956	Mlig455_044344 {REF} {Length: 1011} {RNA1509_17939} {RNA1310_36650.1} {RNA815_9418.1}
12.	MligTC455_07256	15	0.31	Mlig455_030099	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_030099 {REF} {Length: 739} {NoTransDecoderORF} {RNA1509_58900} {RNA1310_3821} {RNA815_7300}
13.	MligTC455_35673	285	5.94	Mlig455_024928	Neo: - Age: - Region-enriched R7: 3.355/0.00005	ANK1	0.954	-	-	-	-	-	0.954	Mlig455_024928 {REF} {Length: 6147} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=340.7]; Ankyrin repeats (many copies) [PF13637.8, score=263.2]; Ankyrin repeat [PF00023.32, score=251.5]; Ankyrin repeats (many copies) [PF13857.8, score=233.6]; Ankyrin repeat [PF13606.8, score=225.1]; Mab-21 protein [PF03281.16, score=27.2]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=280, Expect=6e-76]; ENSG00000145362, ANK2, ankyrin 2, [Score=273, Expect=8e-74]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=270, Expect=3e-74]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=266, Expect=1e-71]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=264, Expect=4e-71]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=265, Expect=3e-71]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=271, Expect=1e-73]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=275, Expect=2e-77]} {RNA1509_15887} {RNA1310_1901, RNA1509_15887} {RNA1509_15887, RNA815_4744}
14.	MligTC455_22889	401	8.35	Mlig455_049943	Neo: - Age: - Region-enriched R8: 2.350/0.00423 Region-enriched R7: 1.908/0.01778		0.953	-	-	-	-	-	0.953	Mlig455_049943 {REF} {Length: 4673} {RNA1509_32044} {RNA1310_13599.2, RNA1509_32044} {RNA1509_32044, RNA815_5368.1}
15.	MligTC455_25092	59	1.22	Mlig455_061225	Neo: - Age: Down-Up-Down		0.952	-	-	-	-	-	0.952	Mlig455_061225 {REF} {Length: 2687} {Pfam: Mab-21 protein [PF03281.16, score=32.1]} {RNA1509_38691} {RNA1310_3760} {RNA815_2084.1}
16.	MligTC455_51517	58	1.2	Mlig455_009258	Neo: - Age: - Region-enriched R7: 4.573/0.00239		0.952	-	-	-	-	-	0.952	Mlig455_009258 {REF} {Length: 7134} {RNA1509_45796} {RNA1310_11885} {RNA815_30863}
17.	MligTC455_07218	47	0.98	Mlig455_069290	Neo: - Age: Up-Down-Up Region-enriched R4: 4.516/0.01787		0.951	-	-	-	0.951	-	-	Mlig455_069290 {REF} {Length: 808} {NoTransDecoderORF} {RNA1509_49996} {RNA1310_9034} {RNA815_7354}
18.	MligTC455_40260	7083	147.57	Mlig455_058193	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.425 Region-enriched R7: 5.743/0.00000 Region-enriched R8: 4.581/0.00001 Regeneration-depleted BL: -13.476 Regeneration-depleted R6: -8.784	AVP	0.951	-	-	-	-	-	0.951	Mlig455_058193 {REF} {Length: 1929} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=58.6]} {Human: ENSG00000101200, AVP, arginine vasopressin, [RH, Score=58.5, Expect=2e-10]} {Mouse: ENSMUSG00000037727, Avp, arginine vasopressin, [RH, Score=63.9, Expect=2e-12]} {RNA1509_15970} {RNA1310_46866} {RNA815_23759}
19.	MligTC455_02412	75	1.56	Mlig455_011577	Neo: - Age: - Region-enriched R6: 6.973/0.00029		0.95	-	-	-	-	-	0.950	Mlig455_011577 {REF} {Length: 2541} {RNA1310_57680} {RNA815_62505}
20.	MligTC455_17376	103	2.15	Mlig455_020346	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_020346 {REF} {Length: 1093} {NoTransDecoderORF} {RNA1310_106511}
21.	MligTC455_27763	38	0.79	Mlig455_027014, Mlig455_027077	Neo: - Age: -	ASIC1	0.95	-	-	-	-	-	0.950	Mlig455_027014 {REF} {Length: 2765} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=153.0]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=52.0, Expect=2e-06]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=65.1, Expect=1e-10]} {Smed: dd_Smed_v6_8949_0_1, dd_Smed_v6_8949_0_1, [Score=94.0, Expect=6e-20]} {RNA1310_11972} {RNA815_48193} Mlig455_027077 {REF} {Length: 3006} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=211.8]} {Human: ENSG00000110881, ASIC1, acid sensing ion channel subunit 1, [Score=59.7, Expect=1e-08]; ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=58.2, Expect=4e-08]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=59.3, Expect=1e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=56.6, Expect=8e-08]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [Score=65.1, Expect=1e-10]} {Smed: dd_Smed_v6_8949_0_1, dd_Smed_v6_8949_0_1, [Score=115, Expect=2e-26]} {RNA1310_11972} {RNA815_48193}
22.	MligTC455_33966	34	0.72	Mlig455_032703	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_032703 {REF} {Length: 907} {Pfam: F5/8 type C domain [PF00754.27, score=32.8]} {Dmel: FBgn0001083, fw, furrowed, [Score=46.6, Expect=8e-06]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=53.1, Expect=4e-09]} {RNA1509_42117} {RNA1310_82261} {RNA815_54270}
23.	MligTC455_34981	120	2.49	Mlig455_069060	Neo: Germline Age: - Region-enriched R7: 4.378/0.00000		0.95	-	-	-	-	-	0.950	Mlig455_069060 {REF} {Length: 3649} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=91.1]} {Dmel: FBgn0030443, CG12715, [Score=97.8, Expect=1e-21]} {Celegans: WBGene00012941, Y47D3B.4, [Score=84.7, Expect=2e-17]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=90.1, Expect=2e-19]} {RNA1509_46243} {RNA1310_16593} {RNA815_4190.1}
24.	MligTC455_42887	60	1.24	Mlig455_036468, Mlig455_056252	Neo: - Age: -	CCKAR	0.95	-	-	-	-	-	0.950	Mlig455_036468 {REF} {Length: 2390} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=81.1]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=37.9]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=19.5]} {Human: ENSG00000163394, CCKAR, cholecystokinin A receptor, [Score=53.5, Expect=5e-07]; ENSG00000170425, ADORA2B, adenosine A2b receptor, [Score=53.1, Expect=4e-07]} {Mouse: ENSMUSG00000026237, Nmur1, neuromedin U receptor 1, [Score=59.3, Expect=4e-09]} {Dmel: FBgn0264002, MsR2, Myosuppressin receptor 2, [Score=57.0, Expect=3e-08]} {Celegans: WBGene00016428, dmsr-7, DroMyoSuppressin Receptor related, [Score=68.6, Expect=3e-12]} {Smed: dd_Smed_v6_9550_0_1, dd_Smed_v6_9550_0_1, [Score=69.7, Expect=9e-13]} {RNA1310_37299} {RNA815_29990} Mlig455_056252 {REF} {Length: 2265} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=22.8]} {RNA1310_56612} {RNA815_44133}
25.	MligTC455_51650	92	1.93	Mlig455_036750	Neo: - Age: - Region-enriched R2: 3.192/0.03650	ARL3	0.95	-	-	-	-	-	0.950	Mlig455_036750 {REF} {Length: 2942} {Pfam: ADP-ribosylation factor family [PF00025.23, score=98.6]; G-protein alpha subunit [PF00503.22, score=36.0]; Signal recognition particle receptor beta subunit [PF09439.12, score=35.5]; 50S ribosome-binding GTPase [PF01926.25, score=20.6]; Ras family [PF00071.24, score=20.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=19.6]} {Human: ENSG00000138175, ARL3, ADP ribosylation factor like GTPase 3, [Score=81.3, Expect=2e-18]; ENSG00000188042, ARL4C, ADP ribosylation factor like GTPase 4C, [Score=81.3, Expect=3e-18]; ENSG00000134287, ARF3, ADP ribosylation factor 3, [Score=78.6, Expect=2e-17]; ENSG00000143761, ARF1, ADP ribosylation factor 1, [Score=78.2, Expect=2e-17]} {Mouse: ENSMUSG00000034936, Arl4d, ADP-ribosylation factor-like 4D, [Score=84.7, Expect=8e-20]; ENSMUSG00000025035, Arl3, ADP-ribosylation factor-like 3, [Score=82.4, Expect=5e-19]; ENSMUSG00000049866, Arl4c, ADP-ribosylation factor-like 4C, [Score=80.9, Expect=2e-18]} {Dmel: FBgn0038916, dnd, dead end, [Score=82.8, Expect=2e-19]} {Celegans: WBGene00000188, arl-3, ADP-ribosylation factor-like protein 3, [Score=86.3, Expect=1e-20]} {Smed: dd_Smed_v6_2013_0_1, dd_Smed_v6_2013_0_1, [Score=102, Expect=3e-27]} {RNA1310_52038} {RNA815_22575.1}