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Results for MligTC455_25658

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25658 50 1.05 Mlig455_012169

Neo: -

Age: Up-Down-Down

 DMD Mlig455_012169 {REF} {Length: 11976} {tRNA: Leu(TAA), score=85.1} {Pfam: EF-hand [PF09069.13, score=115.1]; EF hand [PF09068.13, score=113.4]; Spectrin repeat [PF00435.23, score=43.9]; Zinc finger, ZZ type [PF00569.19, score=41.7]; WW domain [PF00397.28, score=19.1]} {Human: ENSG00000198947, DMD, dystrophin, [Score=408, Expect=1e-116]} {Mouse: ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [Score=404, Expect=3e-112]} {Dmel: FBgn0260003, Dys, Dystrophin, [Score=419, Expect=2e-123]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [Score=295, Expect=2e-79]} {Smed: dd_Smed_v6_5325_0_1, dd_Smed_v6_5325_0_1, [RH, Score=286, Expect=1e-76]} {RNA1509_29072} {RNA1310_283.1} {RNA815_544.1}

Cumulative graph for MligTC455_25658

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.371 1.316 0.64324 1.00000
RegionR2 2.796 1.316 0.14543 0.47542
RegionR3 -2.522 1.316 1.00000 1.00000
RegionR4 -2.512 1.316 1.00000 1.00000
RegionR5 -0.208 1.316 0.98111 1.00000
RegionR6 2.681 1.316 0.14585 0.68253
RegionR7 0.912 1.316 0.63698 1.00000
RegionR8 2.225 1.316 0.29349 0.92259

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.4 1.316 1.00000 1.00000
RegenerationR2 2.051 1.316 0.06297 0.41184
RegenerationR3 4.099 1.316 0.03006 0.31104
RegenerationR4 2.619 1.316 0.24185 0.69050
RegenerationR5 -0.072 1.316 0.78070 0.98198
RegenerationR6 -3.547 1.316 0.09718 0.38764
RegenerationBL 0.976 1.316 0.57621 0.92919
RegenerationTP 0.253 1.316 0.83184 1.00000


Genes with expression patterns similar to MligTC455_25658

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25658 50 1.05 Mlig455_012169

Neo: -

Age: Up-Down-Down

 DMD 4 1.000 1.000 - - 1.000 1.000 Mlig455_012169 {REF} {Length: 11976} {tRNA: Leu(TAA), score=85.1} {Pfam: EF-hand [PF09069.13, score=115.1]; EF hand [PF09068.13, score=113.4]; Spectrin repeat [PF00435.23, score=43.9]; Zinc finger, ZZ type [PF00569.19, score=41.7]; WW domain [PF00397.28, score=19.1]} {Human: ENSG00000198947, DMD, dystrophin, [Score=408, Expect=1e-116]} {Mouse: ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [Score=404, Expect=3e-112]} {Dmel: FBgn0260003, Dys, Dystrophin, [Score=419, Expect=2e-123]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [Score=295, Expect=2e-79]} {Smed: dd_Smed_v6_5325_0_1, dd_Smed_v6_5325_0_1, [RH, Score=286, Expect=1e-76]} {RNA1509_29072} {RNA1310_283.1} {RNA815_544.1}
2. MligTC455_29514 79 1.65 Mlig455_040582

Neo: -

Age: -

 1.841 - - - - 0.970 0.871 Mlig455_040582 {REF} {Length: 5734} {RNA1509_1960, RNA1509_3858} {RNA1310_928.1, RNA1509_1960} {RNA1509_1960, RNA815_16674}
3. MligTC455_13155 82 1.7 Mlig455_045045, Mlig455_045059

Neo: -

Age: -

 0.976 - - - - 0.976 -

Mlig455_045045 {REF} {Length: 1706} {RNA1509_24492} {RNA1310_20366} {RNA815_21569}

Mlig455_045059 {REF} {Length: 2198} {RNA1509_16354} {RNA1310_20366} {RNA815_21569}
4. MligTC455_22292 74 1.54 Mlig455_067768, Mlig455_067769, Mlig455_067770

Neo: -

Age: -

 0.974 - - - - - 0.974

Mlig455_067768 {REF} {Length: 485} {NoTransDecoderORF} {RNA1509_42337} {RNA1310_43648} {RNA815_26632}

Mlig455_067769 {REF} {Length: 1579} {NoTransDecoderORF} {RNA1509_42337} {RNA1310_42816} {RNA815_26632}

Mlig455_067770 {REF} {Length: 1583} {RNA1509_42337} {RNA1310_42816} {RNA815_26632}
5. MligTC455_12294 25 0.53 Mlig455_042579

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_042579 {REF} {Length: 435} {NoTransDecoderORF} {RNA1310_80647}
6. MligTC455_42967 296 6.17 Mlig455_002749, Mlig455_011489

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.077

 0.969 - - - - 0.969 -

Mlig455_002749 {REF} {Length: 1700} {RNA1509_21752} {RNA1310_30402.1} {RNA815_26388}

Mlig455_011489 {REF} {Length: 1762} {RNA1509_21752, RNA1509_6543} {RNA1310_30402.1, RNA1509_6543} {RNA1509_6543, RNA815_26388}
7. MligTC455_44181 53 1.11 Mlig455_069912

Neo: -

Age: -

 TRIM3 0.963 - - - - 0.963 - Mlig455_069912 {REF} {Length: 2394} {Pfam: Ring finger domain [PF13639.8, score=26.1]; RING-type zinc-finger [PF13445.8, score=24.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.7]; Prokaryotic RING finger family 4 [PF14447.8, score=22.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.3]; zinc-RING finger domain [PF14634.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.5]; RING-H2 zinc finger domain [PF12678.9, score=19.8]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=55.8, Expect=2e-07]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=55.1, Expect=2e-07]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_2039_0_1, dd_Smed_v6_2039_0_1, [Score=158, Expect=5e-42]} {RNA1509_28145} {RNA1310_10684} {RNA815_4887}
8. MligTC455_33668 60 1.25 Mlig455_039039

Neo: -

Age: Up-Down-Up

 0.961 - - - - 0.961 - Mlig455_039039 {REF} {Length: 4009} {Pfam: SAP domain [PF02037.29, score=37.9]} {RNA1509_38222, RNA1509_51141} {RNA1310_17762.1, RNA1509_38222, RNA1509_51141} {RNA1509_38222, RNA1509_51141, RNA815_12470.1}
9. MligTC455_16373 174 3.63 Mlig455_030616, Mlig455_031025

Neo: -

Age: -

Region-enriched R7: 3.799/0.02098

 RAPGEF2 0.96 - - - - - 0.960

Mlig455_030616 {REF} {Length: 3142} {Pfam: RasGEF domain [PF00617.21, score=60.1]; RasGEF N-terminal motif [PF00618.22, score=30.4]; Hpt domain [PF01627.25, score=20.8]} {Human: ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [Score=126, Expect=5e-29]; ENSG00000158987, RAPGEF6, Rap guanine nucleotide exchange factor 6, [Score=121, Expect=1e-27]; ENSG00000273217, AC008695.1, novel protein, [Score=120, Expect=4e-27]} {Mouse: ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [Score=125, Expect=6e-29]; ENSMUSG00000037533, Rapgef6, Rap guanine nucleotide exchange factor (GEF) 6, [Score=120, Expect=4e-28]} {Dmel: FBgn0265778, PDZ-GEF, PDZ domain-containing guanine nucleotide exchange factor, [Score=118, Expect=8e-27]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [Score=114, Expect=9e-26]} {Smed: dd_Smed_v6_10889_0_1, dd_Smed_v6_10889_0_1, [Score=69.3, Expect=5e-12]} {RNA1310_33127.1} {RNA815_32874}

Mlig455_031025 {REF} {Length: 3182} {Pfam: RasGEF domain [PF00617.21, score=58.2]; RasGEF N-terminal motif [PF00618.22, score=30.4]} {Human: ENSG00000109756, RAPGEF2, Rap guanine nucleotide exchange factor 2, [Score=127, Expect=3e-29]; ENSG00000158987, RAPGEF6, Rap guanine nucleotide exchange factor 6, [Score=122, Expect=8e-28]; ENSG00000273217, AC008695.1, novel protein, [Score=121, Expect=2e-27]} {Mouse: ENSMUSG00000062232, Rapgef2, Rap guanine nucleotide exchange factor (GEF) 2, [Score=126, Expect=3e-29]; ENSMUSG00000037533, Rapgef6, Rap guanine nucleotide exchange factor (GEF) 6, [Score=123, Expect=8e-29]} {Dmel: FBgn0265778, PDZ-GEF, PDZ domain-containing guanine nucleotide exchange factor, [Score=120, Expect=2e-27]} {Celegans: WBGene00004254, pxf-1, Rap guanine nucleotide exchange factor, [Score=109, Expect=3e-24]} {Smed: dd_Smed_v6_4950_0_3, dd_Smed_v6_4950_0_3, [Score=72.0, Expect=1e-12]} {RNA1310_33127.1} {RNA815_32874}
10. MligTC455_21869 25 0.53 Mlig455_026145

Neo: -

Age: -

 TRPC4 0.959 - - - - - 0.959 Mlig455_026145 {REF} {Length: 2414} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=64.7, Expect=2e-11]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=66.6, Expect=2e-12]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=75.5, Expect=2e-15]} {Smed: dd_Smed_v6_20495_0_1, dd_Smed_v6_20495_0_1, [Score=110, Expect=6e-28]} {RNA1509_42587} {RNA1310_16811.2} {RNA815_23789}
11. MligTC455_21774 61 1.27 Mlig455_027485

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_027485 {REF} {Length: 570} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_6578} {RNA815_41194.1}
12. MligTC455_32376 774 16.13 Mlig455_042047

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_042047 {REF} {Length: 5768} {Pfam: BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=31.8]} {RNA1509_13039, RNA1509_16800, RNA1509_21905, RNA1509_27318, RNA1509_33932, RNA1509_7422} {RNA1310_9687, RNA1509_13039, RNA1509_16800, RNA1509_21905, RNA1509_27318, RNA1509_33932, RNA1509_7422} {RNA1509_13039, RNA1509_16800, RNA1509_21905, RNA1509_27318, RNA1509_33932, RNA1509_7422, RNA815_5090}
13. MligTC455_10678 44 0.91 Mlig455_018075

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_018075 {REF} {Length: 1279} {RNA1509_51052} {RNA1310_60415} {RNA815_52686}
14. MligTC455_30131 21 0.44 Mlig455_070322

Neo: -

Age: Up-Down-Up

 0.952 - - - - - 0.952 Mlig455_070322 {REF} {Length: 3157} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=33.9]} {Dmel: FBgn0034168, CG15614, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_11997_0_1, dd_Smed_v6_11997_0_1, [RH, Score=150, Expect=3e-40]} {RNA1310_84484} {RNA815_49731}
15. MligTC455_27801 113 2.36 Mlig455_033476

Neo: -

Age: -

 PLCH2 0.951 - - - - - 0.951 Mlig455_033476 {REF} {Length: 8788} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=200.3]; Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=106.2]; RasGEF domain [PF00617.21, score=54.0]; Ras association (RalGDS/AF-6) domain [PF00788.25, score=39.7]; C2 domain [PF00168.32, score=29.3]} {Human: ENSG00000149527, PLCH2, phospholipase C eta 2, [Score=326, Expect=4e-90]; ENSG00000276429, PLCH2, phospholipase C eta 2, [Score=326, Expect=4e-90]; ENSG00000101333, PLCB4, phospholipase C beta 4, [Score=325, Expect=1e-90]} {Mouse: ENSMUSG00000024998, Plce1, phospholipase C, epsilon 1, [RH, Score=282, Expect=1e-75]} {Dmel: FBgn0003416, sl, small wing, [Score=164, Expect=3e-40]} {Celegans: WBGene00004036, plc-1, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1, [Score=432, Expect=6e-123]} {Smed: dd_Smed_v6_9716_1_1, dd_Smed_v6_9716_1_1, [Score=752, Expect=0.0]} {RNA1509_26054} {RNA1310_1143.2} {RNA815_10233}
16. MligTC455_37606 16 0.33 Mlig455_065863

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_065863 {REF} {Length: 6006} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=26.6]} {RNA1509_18498} {RNA1310_7466, RNA1509_18498} {RNA1509_18498, RNA815_5209}

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