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Results for MligTC455_44181

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44181 53 1.11 Mlig455_069912

Neo: -

Age: -

 TRIM3 Mlig455_069912 {REF} {Length: 2394} {Pfam: Ring finger domain [PF13639.8, score=26.1]; RING-type zinc-finger [PF13445.8, score=24.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.7]; Prokaryotic RING finger family 4 [PF14447.8, score=22.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.3]; zinc-RING finger domain [PF14634.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.5]; RING-H2 zinc finger domain [PF12678.9, score=19.8]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=55.8, Expect=2e-07]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=55.1, Expect=2e-07]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_2039_0_1, dd_Smed_v6_2039_0_1, [Score=158, Expect=5e-42]} {RNA1509_28145} {RNA1310_10684} {RNA815_4887}

Cumulative graph for MligTC455_44181

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 3.565 1.447 0.14651 0.75949
RegionR2 1.832 1.447 0.22690 0.59780
RegionR3 1.177 1.447 0.29208 0.83435
RegionR4 0.037 1.447 0.70429 0.99209
RegionR5 -0.546 1.447 0.85004 1.00000
RegionR6 -0.206 1.447 0.77574 1.00000
RegionR7 -3.675 1.447 1.00000 1.00000
RegionR8 -2.183 1.447 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -8.053 1.447 0.11636 0.84207
RegenerationR2 -2.277 1.447 0.00672 0.13040
RegenerationR3 -2.07 1.447 0.04039 0.35310
RegenerationR4 -1.067 1.447 0.29598 0.73876
RegenerationR5 -0.888 1.447 0.38112 0.78740
RegenerationR6 -2.316 1.447 0.06734 0.32545
RegenerationBL 0.649 1.447 0.59886 0.94637
RegenerationTP -1.553 1.447 0.99974 1.00000


Genes with expression patterns similar to MligTC455_44181

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44181 53 1.11 Mlig455_069912

Neo: -

Age: -

 TRIM3 3 - - 1.000 - 1.000 1.000 Mlig455_069912 {REF} {Length: 2394} {Pfam: Ring finger domain [PF13639.8, score=26.1]; RING-type zinc-finger [PF13445.8, score=24.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=23.7]; Prokaryotic RING finger family 4 [PF14447.8, score=22.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=22.3]; zinc-RING finger domain [PF14634.8, score=21.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=21.5]; RING-H2 zinc finger domain [PF12678.9, score=19.8]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=55.8, Expect=2e-07]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=55.1, Expect=2e-07]} {Celegans: WBGene00003597, nhl-1, RING finger protein nhl-1, [Score=48.1, Expect=1e-05]} {Smed: dd_Smed_v6_2039_0_1, dd_Smed_v6_2039_0_1, [Score=158, Expect=5e-42]} {RNA1509_28145} {RNA1310_10684} {RNA815_4887}
2. MligTC455_25003 427 8.9 Mlig455_011659

Neo: -

Age: -

 MAP3K19 1.696 - - 0.720 - 0.976 - Mlig455_011659 {REF} {Length: 5884} {Pfam: Protein kinase domain [PF00069.27, score=305.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=256.4]; Ankyrin repeats (3 copies) [PF12796.9, score=75.6]; Caspase domain [PF00656.24, score=56.2]; Ankyrin repeats (many copies) [PF13857.8, score=53.1]; Ankyrin repeat [PF13606.8, score=52.2]; Ankyrin repeats (many copies) [PF13637.8, score=40.8]; Fungal protein kinase [PF17667.3, score=34.3]; Ankyrin repeat [PF00023.32, score=31.5]; Kinase-like [PF14531.8, score=29.8]; Ternary complex associated domain 9 [PF19974.1, score=24.2]; ABC1 atypical kinase-like domain [PF03109.18, score=22.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=140, Expect=2e-34]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=140, Expect=2e-34]} {Dmel: FBgn0024329, Mekk1, [Score=114, Expect=5e-25]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=116, Expect=8e-26]} {Smed: dd_Smed_v6_11735_0_1, dd_Smed_v6_11735_0_1, [RH, Score=113, Expect=2e-27]} {RNA1509_12652, RNA1509_6764} {RNA1310_1303.1, RNA1509_12652, RNA1509_6764} {RNA1509_12652, RNA1509_6764, RNA815_406.1}
3. MligTC455_25004 370 7.7 Mlig455_049927

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.569

Region-enriched R4: 2.246/0.03082

 MAP3K19 0.974 - - - - 0.974 - Mlig455_049927 {REF} {Length: 6523} {Pfam: Protein kinase domain [PF00069.27, score=304.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=256.2]; Ankyrin repeats (3 copies) [PF12796.9, score=74.0]; Ankyrin repeats (many copies) [PF13857.8, score=51.9]; Ankyrin repeat [PF13606.8, score=49.2]; Ankyrin repeats (many copies) [PF13637.8, score=36.9]; Fungal protein kinase [PF17667.3, score=34.3]; Kinase-like [PF14531.8, score=29.8]; Ankyrin repeat [PF00023.32, score=26.2]; Ternary complex associated domain 9 [PF19974.1, score=24.1]; ABC1 atypical kinase-like domain [PF03109.18, score=22.3]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=140, Expect=3e-34]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=140, Expect=2e-34]} {Dmel: FBgn0024329, Mekk1, [Score=114, Expect=5e-25]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=116, Expect=7e-26]} {Smed: dd_Smed_v6_11735_0_1, dd_Smed_v6_11735_0_1, [RH, Score=112, Expect=5e-27]} {RNA1509_12652} {RNA1310_1303.1} {RNA815_406.1}
4. MligTC455_56840 7 0.15 Mlig455_012947

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_012947 {REF} {Length: 4} {NoTransDecoderORF}
5. MligTC455_29464 25 0.53 Mlig455_021892

Neo: -

Age: -

 SDCCAG8 0.966 - - - - 0.966 - Mlig455_021892 {REF} {Length: 3036} {Pfam: Centrosomal colon cancer autoantigen protein family [PF15964.7, score=164.7]} {Human: ENSG00000276111, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]; ENSG00000054282, SDCCAG8, serologically defined colon cancer antigen 8, [RH, Score=120, Expect=2e-27]} {Mouse: ENSMUSG00000026504, Sdccag8, serologically defined colon cancer antigen 8, [RH, Score=109, Expect=4e-24]} {Dmel: FBgn0266566, CG45105, [Score=52.4, Expect=2e-06]} {Smed: dd_Smed_v6_9295_0_2, dd_Smed_v6_9295_0_2, [RH, Score=87.8, Expect=7e-18]} {RNA1509_42574} {RNA1310_5942.1} {RNA815_9353.1}
6. MligTC455_43324 71 1.47 Mlig455_041984

Neo: -

Age: -

Region-enriched R2: 6.623/0.00573

 0.965 - - - - 0.965 - Mlig455_041984 {REF} {Length: 388} {NoTransDecoderORF} {RNA1509_49821} {RNA1310_52560.2} {RNA815_59873}
7. MligTC455_25658 50 1.05 Mlig455_012169

Neo: -

Age: Up-Down-Down

 DMD 0.963 - - - - 0.963 - Mlig455_012169 {REF} {Length: 11976} {tRNA: Leu(TAA), score=85.1} {Pfam: EF-hand [PF09069.13, score=115.1]; EF hand [PF09068.13, score=113.4]; Spectrin repeat [PF00435.23, score=43.9]; Zinc finger, ZZ type [PF00569.19, score=41.7]; WW domain [PF00397.28, score=19.1]} {Human: ENSG00000198947, DMD, dystrophin, [Score=408, Expect=1e-116]} {Mouse: ENSMUSG00000045103, Dmd, dystrophin, muscular dystrophy, [Score=404, Expect=3e-112]} {Dmel: FBgn0260003, Dys, Dystrophin, [Score=419, Expect=2e-123]} {Celegans: WBGene00001131, dys-1, Dystrophin-1, [Score=295, Expect=2e-79]} {Smed: dd_Smed_v6_5325_0_1, dd_Smed_v6_5325_0_1, [RH, Score=286, Expect=1e-76]} {RNA1509_29072} {RNA1310_283.1} {RNA815_544.1}
8. MligTC455_10678 44 0.91 Mlig455_018075

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_018075 {REF} {Length: 1279} {RNA1509_51052} {RNA1310_60415} {RNA815_52686}
9. MligTC455_42967 296 6.17 Mlig455_002749, Mlig455_011489

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.077

 0.96 - - - - 0.960 -

Mlig455_002749 {REF} {Length: 1700} {RNA1509_21752} {RNA1310_30402.1} {RNA815_26388}

Mlig455_011489 {REF} {Length: 1762} {RNA1509_21752, RNA1509_6543} {RNA1310_30402.1, RNA1509_6543} {RNA1509_6543, RNA815_26388}
10. MligTC455_06453 157 3.27 Mlig455_025541, Mlig455_025558

Neo: -

Age: -

 0.959 - - - - 0.959 -

Mlig455_025541 {REF} {Length: 1381} {RNA1310_109111}

Mlig455_025558 {REF} {Length: 1263} {RNA1310_109111}
11. MligTC455_32427 73 1.52 Mlig455_055470

Neo: -

Age: -

 NWD2 0.959 - - - - 0.959 - Mlig455_055470 {REF} {Length: 4526} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4062) [PF13271.8, score=42.0]; AAA ATPase domain [PF13191.8, score=40.6]; NACHT domain [PF05729.14, score=37.8]; AAA domain [PF13401.8, score=21.9]; ATPase domain predominantly from Archaea [PF01637.20, score=19.7]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=165, Expect=4e-41]; ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=157, Expect=7e-39]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=161, Expect=3e-40]} {Dmel: FBgn0038397, CG10185, [Score=231, Expect=7e-63]} {Celegans: WBGene00020254, T05C3.2, [Score=232, Expect=2e-63]} {Smed: dd_Smed_v6_11085_0_2, dd_Smed_v6_11085_0_2, [Score=127, Expect=6e-30]} {RNA1509_3054} {RNA1310_322} {RNA815_139.1}
12. MligTC455_39057 57 1.18 Mlig455_013966

Neo: Int S/G2/M

Age: -

 0.959 - - - - 0.959 - Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321}
13. MligTC455_22841 20 0.41 Mlig455_066350

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_066350 {REF} {Length: 694} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35987, RNA1509_46319} {RNA1310_35806, RNA1509_35987, RNA1509_46319} {RNA1509_35987, RNA1509_46319, RNA815_14596}
14. MligTC455_37606 16 0.33 Mlig455_065863

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_065863 {REF} {Length: 6006} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=26.6]} {RNA1509_18498} {RNA1310_7466, RNA1509_18498} {RNA1509_18498, RNA815_5209}
15. MligTC455_42918 220 4.59 Mlig455_035176

Neo: -

Age: -

 KCNK9 0.955 - - - - 0.955 - Mlig455_035176 {REF} {Length: 1722} {Pfam: Ion channel [PF07885.18, score=90.6]; Ion transport protein [PF00520.33, score=21.3]} {Human: ENSG00000169427, KCNK9, potassium two pore domain channel subfamily K member 9, [Score=82.0, Expect=4e-17]} {Mouse: ENSMUSG00000036760, Kcnk9, potassium channel, subfamily K, member 9, [Score=84.0, Expect=6e-18]} {Dmel: FBgn0038165, Task6, TWIK-related acid-sensitive K[+] channel 6, [Score=98.6, Expect=4e-23]} {Celegans: WBGene00006318, sup-9, Two pore potassium channel protein sup-9, [Score=84.7, Expect=1e-18]} {Smed: dd_Smed_v6_11226_0_1, dd_Smed_v6_11226_0_1, [RH, Score=94.0, Expect=2e-22]} {RNA1509_37947} {RNA1310_32556} {RNA815_14264}
16. MligTC455_37120 82 1.71 Mlig455_015330

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_015330 {REF} {Length: 8420} {Pfam: Dynamin family [PF00350.25, score=33.5]} {Celegans: WBGene00015646, mlt-10, [Score=122, Expect=1e-27]} {RNA1509_20670} {RNA1310_2372} {RNA815_26487}
17. MligTC455_38500 357 7.43 Mlig455_022541, Mlig455_022582

Neo: -

Age: Down-Up-Down

 0.953 - - - - 0.953 -

Mlig455_022541 {REF} {Length: 1156} {TRANSSPLICED} {Pfam: Putative transmembrane protein 170 [PF10190.11, score=57.1]} {RNA1509_49815, RNA1509_55125} {RNA1310_51594, RNA1509_49815} {RNA1509_49815, RNA815_9959.1}

Mlig455_022582 {REF} {Length: 1139} {TRANSSPLICED} {Pfam: Putative transmembrane protein 170 [PF10190.11, score=57.1]} {RNA1509_24875, RNA1509_55125} {RNA1310_51594, RNA1509_24875} {RNA1509_24875, RNA815_9959.1}
18. MligTC455_39058 37 0.77 Mlig455_039326

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_039326 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_104321}
19. MligTC455_22415 512 10.67 Mlig455_008652, Mlig455_069418

Neo: -

Age: -

 RAB1A, RAB1B 0.951 - - - - 0.951 -

Mlig455_008652 {REF} {Length: 6906} {Pfam: Ras family [PF00071.24, score=587.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=389.6]; ADP-ribosylation factor family [PF00025.23, score=200.9]; 50S ribosome-binding GTPase [PF01926.25, score=108.0]; RsgA GTPase [PF03193.18, score=66.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=63.6]; Gtr1/RagA G protein conserved region [PF04670.14, score=52.7]; AAA domain [PF13401.8, score=51.9]; AAA ATPase domain [PF13191.8, score=51.0]; Bacterial TniB protein [PF05621.13, score=45.5]; NACHT domain [PF05729.14, score=44.6]; P-loop containing dynein motor region [PF12775.9, score=42.5]; P-loop containing region of AAA domain [PF13555.8, score=42.0]; MCM P-loop domain [PF00493.25, score=41.8]; ABC transporter [PF00005.29, score=40.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=39.2]; Caspase recruitment domain [PF00619.23, score=36.1]; AAA domain [PF13671.8, score=32.9]; Sigma-54 interaction domain [PF00158.28, score=32.7]; Protein of unknown function (DUF815) [PF05673.15, score=30.6]; Septin [PF00735.20, score=30.3]; AAA domain [PF13479.8, score=30.1]; G-protein alpha subunit [PF00503.22, score=29.2]; RNA helicase [PF00910.24, score=28.1]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=25.5]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=23.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.1]; Mitochondrial ribosomal death-associated protein 3 [PF10236.11, score=21.9]; AAA domain [PF13173.8, score=20.0]; Interferon-inducible GTPase (IIGP) [PF05049.15, score=19.8]; AAA domain [PF13238.8, score=19.2]; Conserved hypothetical ATP binding protein [PF03029.19, score=18.6]; Family of unknown function (DUF5838) [PF19156.2, score=18.5]} {Human: ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=161, Expect=2e-44]; ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=160, Expect=4e-44]; ENSG00000143545, RAB13, RAB13, member RAS oncogene family, [Score=155, Expect=4e-42]; ENSG00000285641, AL358472.6, novel protein, [Score=155, Expect=4e-42]; ENSG00000111737, RAB35, RAB35, member RAS oncogene family, [Score=153, Expect=1e-41]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=162, Expect=6e-45]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=160, Expect=3e-44]} {Dmel: FBgn0285937, Rab1, [Score=163, Expect=3e-45]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=160, Expect=2e-44]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=160, Expect=1e-44]} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1310_2946, RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043} {RNA1509_27183, RNA1509_39657, RNA1509_41590, RNA1509_44043, RNA815_567}

Mlig455_069418 {REF} {Length: 6098} {Pfam: Ras family [PF00071.24, score=148.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=108.4]; ADP-ribosylation factor family [PF00025.23, score=63.8]; Caspase recruitment domain [PF00619.23, score=36.9]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=21.8]; Elongation factor Tu GTP binding domain [PF00009.29, score=21.2]; Bacterial TniB protein [PF05621.13, score=18.7]} {Human: ENSG00000174903, RAB1B, RAB1B, member RAS oncogene family, [Score=155, Expect=2e-42]; ENSG00000138069, RAB1A, RAB1A, member RAS oncogene family, [Score=155, Expect=1e-42]} {Mouse: ENSMUSG00000020149, Rab1a, RAB1A, member RAS oncogene family, [Score=156, Expect=6e-43]; ENSMUSG00000024870, Rab1b, RAB1B, member RAS oncogene family, [Score=154, Expect=2e-42]} {Dmel: FBgn0285937, Rab1, [Score=154, Expect=2e-42]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=149, Expect=6e-41]} {Smed: dd_Smed_v6_488_0_1, dd_Smed_v6_488_0_1, [Score=148, Expect=1e-40]} {RNA1509_44043} {RNA1310_6196} {RNA815_567}
20. MligTC455_24549 20 0.42 Mlig455_032034

Neo: -

Age: -

 ROBO3 0.951 - - - - 0.951 - Mlig455_032034 {REF} {Length: 6931} {Pfam: Immunoglobulin domain [PF13927.8, score=135.0]; Immunoglobulin I-set domain [PF07679.18, score=120.2]; Immunoglobulin domain [PF00047.27, score=83.5]; Immunoglobulin domain [PF13895.8, score=81.9]; Immunoglobulin V-set domain [PF07686.19, score=75.7]; Fibronectin type III domain [PF00041.23, score=23.6]; Immunoglobulin domain [PF18452.3, score=19.8]} {Human: ENSG00000154134, ROBO3, roundabout guidance receptor 3, [Score=166, Expect=9e-41]; ENSG00000169855, ROBO1, roundabout guidance receptor 1, [Score=165, Expect=1e-40]; ENSG00000185008, ROBO2, roundabout guidance receptor 2, [Score=164, Expect=2e-40]} {Mouse: ENSMUSG00000022883, Robo1, roundabout guidance receptor 1, [Score=194, Expect=1e-49]} {Dmel: FBgn0005631, robo1, roundabout 1, [Score=147, Expect=2e-35]} {Celegans: WBGene00004729, sax-3, [Score=146, Expect=3e-35]} {Smed: dd_Smed_v6_8494_0_2, dd_Smed_v6_8494_0_2, [Score=251, Expect=5e-68]} {RNA1310_77723} {RNA815_50892}
21. MligTC455_30229 85 1.77 Mlig455_050775

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_050775 {REF} {Length: 6509} {TRANSSPLICED} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=176.6]} {Celegans: WBGene00021577, Y46B2A.2, [Score=445, Expect=3e-138]} {Smed: dd_Smed_v6_91935_0_1, dd_Smed_v6_91935_0_1, [Score=68.9, Expect=1e-13]} {RNA1509_5036} {RNA1310_4048.1} {RNA815_356.1}
22. MligTC455_48573 49 1.02 Mlig455_060057

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_060057 {REF} {Length: 2911} {RNA1509_38551} {RNA1310_97504} {RNA815_14106}
23. MligTC455_13471 12 0.26 Mlig455_065390

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_065390 {REF} {Length: 665} {NoTransDecoderORF} {RNA1509_16969} {RNA1310_51432} {RNA815_47685}

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