Data search
Results for MligTC455_25680
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25680 | 21 | 0.43 | Mlig455_017110, Mlig455_020794 | Neo: - Age: Up-Down-Down |
Mlig455_017110 {REF} {Length: 1225} {Pfam: RNase H [PF00075.26, score=59.0]; zinc-binding in reverse transcriptase [PF13966.8, score=22.6]} {Celegans: WBGene00004382, rnh-1.0, RNase H, [Score=47.8, Expect=3e-06]} {RNA1509_13719} {RNA1310_12754.3} {RNA815_24963} Mlig455_020794 {REF} {Length: 3108} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=65.1]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=47.3]; PHD-finger [PF00628.31, score=24.5]; RNase H [PF00075.26, score=20.7]} {RNA1509_13719} {RNA1310_1546.3} {RNA815_25729} |
Cumulative graph for MligTC455_25680
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.717 | 0.906 | 0.99990 | 1.00000 | |
| RegionR2 | 4.119 | 0.906 | 0.99988 | 1.00000 | |
| RegionR3 | -0.296 | 0.906 | 0.99983 | 1.00000 | |
| RegionR4 | -3.823 | 0.906 | 0.99977 | 1.00000 | |
| RegionR5 | -1.898 | 0.906 | 0.99981 | 1.00000 | |
| RegionR6 | -0.185 | 0.906 | 0.99982 | 1.00000 | |
| RegionR7 | 2.243 | 0.906 | 0.99996 | 1.00000 | |
| RegionR8 | 2.557 | 0.906 | 0.99992 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.246 | 0.906 | 0.99990 | 1.00000 | |
| RegenerationR2 | 3.535 | 0.906 | 0.00167 | 0.06296 | |
| RegenerationR3 | 6.652 | 0.906 | 0.00114 | 0.05430 | |
| RegenerationR4 | 6.656 | 0.906 | 0.00186 | 0.05371 | |
| RegenerationR5 | 5.619 | 0.906 | 0.00057 | 0.03921 | |
| RegenerationR6 | 4.226 | 0.906 | 0.01575 | 0.15486 | |
| RegenerationBL | 0.049 | 0.906 | 0.99990 | 1.00000 | |
| RegenerationTP | 0.551 | 0.906 | 0.99990 | 1.00000 |
Genes with expression patterns similar to MligTC455_25680
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25680 | 21 | 0.43 | Mlig455_017110, Mlig455_020794 | Neo: - Age: Up-Down-Down |
2 | - | - | - | - | 1.000 | 1.000 | Mlig455_017110 {REF} {Length: 1225} {Pfam: RNase H [PF00075.26, score=59.0]; zinc-binding in reverse transcriptase [PF13966.8, score=22.6]} {Celegans: WBGene00004382, rnh-1.0, RNase H, [Score=47.8, Expect=3e-06]} {RNA1509_13719} {RNA1310_12754.3} {RNA815_24963} Mlig455_020794 {REF} {Length: 3108} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=65.1]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=47.3]; PHD-finger [PF00628.31, score=24.5]; RNase H [PF00075.26, score=20.7]} {RNA1509_13719} {RNA1310_1546.3} {RNA815_25729} |
|
| 2. | MligTC455_11946 | 63 | 1.32 | Mlig455_015981, Mlig455_016000 | Neo: - Age: - |
1.905 | - | - | - | - | 0.959 | 0.946 | Mlig455_015981 {REF} {Length: 2957} {NoTransDecoderORF} {RNA1509_47921} {RNA1310_35956} {RNA815_8730.1} Mlig455_016000 {REF} {Length: 2955} {NoTransDecoderORF} {RNA1509_47921} {RNA1310_35956} {RNA815_8730.1} |
|
| 3. | MligTC455_11373 | 41 | 0.85 | Mlig455_041253 | Neo: - Age: - Region-enriched R4: 4.164/0.01537 |
0.969 | - | - | - | - | - | 0.969 | Mlig455_041253 {REF} {Length: 979} {RNA1310_44893} {RNA815_18400} | |
| 4. | MligTC455_25087 | 166 | 3.45 | Mlig455_022808 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.538 Region-enriched R3: 3.678/0.00768 |
MX1 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_022808 {REF} {Length: 2905} {Pfam: Dynamin central region [PF01031.22, score=152.5]; Dynamin family [PF00350.25, score=125.4]; Dynamin GTPase effector domain [PF02212.20, score=43.6]; 50S ribosome-binding GTPase [PF01926.25, score=20.3]} {Human: ENSG00000157601, MX1, MX dynamin like GTPase 1, [RH, Score=331, Expect=5e-104]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=327, Expect=8e-103]} {Dmel: FBgn0003392, shi, shibire, [Score=165, Expect=1e-42]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=154, Expect=3e-39]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [Score=163, Expect=3e-42]} {RNA1509_12083} {RNA1310_10837.2} {RNA815_4177.1} |
| 5. | MligTC455_13988 | 4 | 0.08 | Mlig455_046376 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_046376 {REF} {Length: 687} {RNA1509_28710} {RNA1310_68935, RNA1509_28710} {RNA1509_28710, RNA815_38450} | |
| 6. | MligTC455_40892 | 725 | 15.11 | Mlig455_049201 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.502 Region-enriched R6: 1.534/0.01513 Regeneration-downregulated BL: -3.195 Regeneration-depleted BL: -3.195 |
PDLIM2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_049201 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=46.9]; PDZ domain [PF17820.3, score=28.9]; PDZ domain [PF13180.8, score=21.5]} {Human: ENSG00000120913, PDLIM2, PDZ and LIM domain 2, [Score=57.0, Expect=2e-09]; ENSG00000122367, LDB3, LIM domain binding 3, [Score=56.2, Expect=3e-09]} {Mouse: ENSMUSG00000039376, Synpo2l, synaptopodin 2-like, [Score=58.9, Expect=5e-10]} {Dmel: FBgn0265991, Zasp52, Z band alternatively spliced PDZ-motif protein 52, [Score=71.6, Expect=4e-15]} {Smed: dd_Smed_v6_2888_0_1, dd_Smed_v6_2888_0_1, [Score=204, Expect=3e-67]} {RNA1509_6937} {RNA1310_31656} {RNA815_15504.1} |
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