TomoSeq data search

Data search

Results for MligTC455_40892

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_40892

725

15.11

Mlig455_049201

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.502

Region-enriched R6: 1.534/0.01513

Regeneration-downregulated BL: -3.195

Regeneration-depleted BL: -3.195

PDLIM2

Mlig455_049201 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=46.9]; PDZ domain [PF17820.3, score=28.9]; PDZ domain [PF13180.8, score=21.5]} {Human: ENSG00000120913, PDLIM2, PDZ and LIM domain 2, [Score=57.0, Expect=2e-09]; ENSG00000122367, LDB3, LIM domain binding 3, [Score=56.2, Expect=3e-09]} {Mouse: ENSMUSG00000039376, Synpo2l, synaptopodin 2-like, [Score=58.9, Expect=5e-10]} {Dmel: FBgn0265991, Zasp52, Z band alternatively spliced PDZ-motif protein 52, [Score=71.6, Expect=4e-15]} {Smed: dd_Smed_v6_2888_0_1, dd_Smed_v6_2888_0_1, [Score=204, Expect=3e-67]} {RNA1509_6937} {RNA1310_31656} {RNA815_15504.1}

Cumulative graph for MligTC455_40892

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.902	4.13	0.01995	0.39084
RegionR2	-0.115	4.13	0.84126	1.00000
RegionR3	0.85	4.13	0.05119	0.39624
RegionR4	0.46	4.13	0.35648	0.67897
RegionR5	-0.055	4.13	0.90968	1.00000
RegionR6	1.534	4.13	0.00025	0.01513
RegionR7	0.835	4.13	0.08119	0.54804
RegionR8	-0.608	4.13	0.35921	0.99349

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.048	4.13	0.98121	1.00000
RegenerationR2	0.024	4.13	0.96164	1.00000
RegenerationR3	-0.378	4.13	0.45384	0.83386
RegenerationR4	0.115	4.13	0.82370	0.99545
RegenerationR5	-0.06	4.13	0.90540	1.00000
RegenerationR6	-1.046	4.13	0.03639	0.23844
RegenerationBL	-3.195	4.13	0.00004	0.00205	Specific for BL: -3.195
RegenerationTP	-0.605	4.13	0.33075	0.77497

Genes with expression patterns similar to MligTC455_40892

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_40892	725	15.11	Mlig455_049201	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.502 Region-enriched R6: 1.534/0.01513 Regeneration-downregulated BL: -3.195 Regeneration-depleted BL: -3.195	PDLIM2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049201 {REF} {Length: 1030} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=46.9]; PDZ domain [PF17820.3, score=28.9]; PDZ domain [PF13180.8, score=21.5]} {Human: ENSG00000120913, PDLIM2, PDZ and LIM domain 2, [Score=57.0, Expect=2e-09]; ENSG00000122367, LDB3, LIM domain binding 3, [Score=56.2, Expect=3e-09]} {Mouse: ENSMUSG00000039376, Synpo2l, synaptopodin 2-like, [Score=58.9, Expect=5e-10]} {Dmel: FBgn0265991, Zasp52, Z band alternatively spliced PDZ-motif protein 52, [Score=71.6, Expect=4e-15]} {Smed: dd_Smed_v6_2888_0_1, dd_Smed_v6_2888_0_1, [Score=204, Expect=3e-67]} {RNA1509_6937} {RNA1310_31656} {RNA815_15504.1}
2.	MligTC455_36261	581	12.1	Mlig455_052631	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.618	CA6	0.965	-	-	-	-	-	0.965	Mlig455_052631 {REF} {Length: 1624} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=128.4]} {Human: ENSG00000131686, CA6, carbonic anhydrase 6, [Score=82.0, Expect=3e-17]} {Mouse: ENSMUSG00000090236, Car15, carbonic anhydrase 15, [Score=85.1, Expect=2e-18]} {Dmel: FBgn0040628, CG18672, [Score=73.9, Expect=6e-15]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=71.6, Expect=4e-14]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=83.6, Expect=1e-18]} {RNA1509_20064} {RNA1310_24345} {RNA815_13236.1}
3.	MligTC455_47486	177	3.68	Mlig455_002155	Neo: - Age: -		0.96	-	-	-	-	0.960	-	Mlig455_002155 {REF} {Length: 4784} {TRANSSPLICED} {RNA1509_8421} {RNA1310_19895} {RNA815_8122.1}
4.	MligTC455_45521	1185	24.68	Mlig455_029423	Neo: - Age: Down-Down-Up	ANKRD50	0.953	-	-	-	-	-	0.953	Mlig455_029423 {REF} {Length: 3455} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=255.6]; Protein kinase domain [PF00069.27, score=194.6]; Ankyrin repeats (many copies) [PF13637.8, score=186.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=149.5]; Ankyrin repeat [PF13606.8, score=132.1]; Ankyrin repeats (many copies) [PF13857.8, score=122.5]; Ankyrin repeat [PF00023.32, score=103.8]; ABC1 atypical kinase-like domain [PF03109.18, score=30.9]; Kinase-like [PF14531.8, score=30.6]; Fungal protein kinase [PF17667.3, score=27.6]; Phosphotransferase enzyme family [PF01636.25, score=20.0]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=173, Expect=1e-43]; ENSG00000151150, ANK3, ankyrin 3, [Score=172, Expect=3e-43]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=174, Expect=4e-44]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=172, Expect=2e-43]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=170, Expect=6e-43]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=158, Expect=2e-39]} {Smed: dd_Smed_v6_11663_0_4, dd_Smed_v6_11663_0_4, [Score=202, Expect=7e-55]} {RNA1509_26915, RNA1509_27995, RNA1509_4407} {RNA1310_2580.1, RNA1509_26915, RNA1509_27995} {RNA1509_26915, RNA1509_27995, RNA815_1154.1}
5.	MligTC455_25680	21	0.43	Mlig455_017110, Mlig455_020794	Neo: - Age: Up-Down-Down		0.951	-	-	-	-	0.951	-	Mlig455_017110 {REF} {Length: 1225} {Pfam: RNase H [PF00075.26, score=59.0]; zinc-binding in reverse transcriptase [PF13966.8, score=22.6]} {Celegans: WBGene00004382, rnh-1.0, RNase H, [Score=47.8, Expect=3e-06]} {RNA1509_13719} {RNA1310_12754.3} {RNA815_24963} Mlig455_020794 {REF} {Length: 3108} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=65.1]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=47.3]; PHD-finger [PF00628.31, score=24.5]; RNase H [PF00075.26, score=20.7]} {RNA1509_13719} {RNA1310_1546.3} {RNA815_25729}

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