Data search


search
Exact
Search

Results for MligTC455_25692

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25692 53 1.10 Mlig455_045797

Neo: -

Age: -

Mlig455_045797 {REF} {Length: 9524} {RNA1509_55007} {RNA1310_32142, RNA1509_55007} {RNA1509_55007, RNA815_18496.1}

Cumulative graph for MligTC455_25692

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.3 1.212 0.99994 1.00000
RegionR2 0.132 1.212 0.99990 1.00000
RegionR3 0.815 1.212 0.99998 1.00000
RegionR4 -0.027 1.212 0.99995 1.00000
RegionR5 0.702 1.212 1.00000 1.00000
RegionR6 0.191 1.212 0.99999 1.00000
RegionR7 -0.073 1.212 0.99999 1.00000
RegionR8 -0.44 1.212 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.648 1.212 0.29280 0.99076
RegenerationR2 4.2 1.212 0.00172 0.06412
RegenerationR3 2.703 1.212 0.12420 0.54470
RegenerationR4 3.897 1.212 0.00465 0.09535
RegenerationR5 3.324 1.212 0.01637 0.22225
RegenerationR6 3.191 1.212 0.09046 0.37433
RegenerationBL 3.714 1.212 0.06894 0.30538
RegenerationTP 4.69 1.212 0.06540 0.41220


Genes with expression patterns similar to MligTC455_25692

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25692 53 1.1 Mlig455_045797

Neo: -

Age: -

3 - - - 1.000 1.000 1.000 Mlig455_045797 {REF} {Length: 9524} {RNA1509_55007} {RNA1310_32142, RNA1509_55007} {RNA1509_55007, RNA815_18496.1}
2. MligTC455_20658 197 4.11 Mlig455_038718, Mlig455_063446

Neo: -

Age: -

0.969 - - - - 0.969 -

Mlig455_038718 {REF} {Length: 1687} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_2938.1} {RNA815_14343.1}

Mlig455_063446 {REF} {Length: 394} {NoTransDecoderORF} {RNA1509_51071} {RNA1310_2938.1} {RNA815_14343.3}
3. MligTC455_50930 72 1.49 Mlig455_004647, Mlig455_033044, Mlig455_053127, Mlig455_070976

Neo: -

Age: Up-Down-Up

RBM12B 0.969 - - - - - 0.969

Mlig455_004647 {REF} {Length: 374} {NoTransDecoderORF} {RNA1310_56858} {RNA815_51411}

Mlig455_033044 {REF} {Length: 378} {RNA1310_56858} {RNA815_51411}

Mlig455_053127 {REF} {Length: 1707} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=51.2, Expect=1e-06]; ENSG00000221843, C2orf16, chromosome 2 open reading frame 16, [Score=49.3, Expect=7e-06]} {Dmel: FBgn0029697, CG15570, [Score=58.5, Expect=3e-09]} {RNA1509_49895} {RNA1310_36074} {RNA815_51411}

Mlig455_070976 {REF} {Length: 385} {RNA1310_56858} {RNA815_51411}
4. MligTC455_04059 25 0.52 Mlig455_032168

Neo: -

Age: -

0.966 - - - - - 0.966 Mlig455_032168 {REF} {Length: 2630} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=30.1]; PHD-finger [PF00628.31, score=26.6]; FAM76 protein [PF16046.7, score=21.6]} {RNA1310_70692} {RNA815_33489}
5. MligTC455_46846 4137 86.19 Mlig455_012141

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.322

GABARAPL2 0.959 - - - - 0.959 - Mlig455_012141 {REF} {Length: 1542} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=163.3]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=25.7]} {Human: ENSG00000034713, GABARAPL2, GABA type A receptor associated protein like 2, [RH, Score=176, Expect=5e-58]} {Mouse: ENSMUSG00000031950, Gabarapl2, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2, [RH, Score=176, Expect=3e-58]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=147, Expect=6e-47]} {Celegans: WBGene00002980, lgg-1, [Score=149, Expect=1e-47]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [RH, Score=174, Expect=2e-57]} {RNA1509_5004, RNA1509_55077} {RNA1310_34137, RNA1509_55077} {RNA1509_55077, RNA815_5885}
6. MligTC455_30271 380 7.91 Mlig455_008670, Mlig455_010745, Mlig455_031996, Mlig455_033120, Mlig455_042255

Neo: -

Age: -

0.958 - - - - 0.958 -

Mlig455_008670 {REF} {Length: 1094} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_1311.2} {RNA815_19414}

Mlig455_010745 {REF} {Length: 118} {NoTransDecoderORF} {RNA1509_35750} {RNA1310_31492} {RNA815_11267}

Mlig455_031996 {REF} {Length: 313} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_31492} {RNA815_11267}

Mlig455_033120 {REF} {Length: 154} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_31492} {RNA815_11267}

Mlig455_042255 {REF} {Length: 517} {NoTransDecoderORF} {RNA1509_13206} {RNA1310_17473} {RNA815_11267}
7. MligTC455_08784 74 1.55 Mlig455_018978

Neo: -

Age: -

Region-enriched R4: 3.721/0.00921

0.957 - - - - - 0.957 Mlig455_018978 {REF} {Length: 741} {RNA1310_46406}
8. MligTC455_28142 254 5.3 Mlig455_011323, Mlig455_026058

Neo: -

Age: -

0.953 - - - - 0.953 -

Mlig455_011323 {REF} {Length: 2835} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_24716.1} {RNA815_11419.1}

Mlig455_026058 {REF} {Length: 2664} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_24716.1} {RNA815_11419.1}
9. MligTC455_43752 265 5.52 Mlig455_018054, Mlig455_018069

Neo: -

Age: Down-Up-Up

0.95 - - - - 0.950 -

Mlig455_018054 {REF} {Length: 1803} {RNA1509_20267} {RNA1310_4680} {RNA815_3273}

Mlig455_018069 {REF} {Length: 2524} {RNA1509_20267} {RNA1310_4680} {RNA815_3273}
10. MligTC455_51684 79 1.65 Mlig455_041276

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_041276 {REF} {Length: 1907} {NoTransDecoderORF} {RNA1509_32555} {RNA1310_128083} {RNA815_20740}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA