TomoSeq data search

Data search

Results for MligTC455_46846

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46846

4137

86.19

Mlig455_012141

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.322

GABARAPL2

Mlig455_012141 {REF} {Length: 1542} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=163.3]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=25.7]} {Human: ENSG00000034713, GABARAPL2, GABA type A receptor associated protein like 2, [RH, Score=176, Expect=5e-58]} {Mouse: ENSMUSG00000031950, Gabarapl2, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2, [RH, Score=176, Expect=3e-58]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=147, Expect=6e-47]} {Celegans: WBGene00002980, lgg-1, [Score=149, Expect=1e-47]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [RH, Score=174, Expect=2e-57]} {RNA1509_5004, RNA1509_55077} {RNA1310_34137, RNA1509_55077} {RNA1509_55077, RNA815_5885}

Cumulative graph for MligTC455_46846

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.697	6.512	0.00518	0.22622
RegionR2	0.062	6.512	0.84944	1.00000
RegionR3	0.178	6.512	0.52761	1.00000
RegionR4	0.604	6.512	0.06830	0.23833
RegionR5	0.574	6.512	0.03411	0.14218
RegionR6	0.489	6.512	0.08346	0.53275
RegionR7	0.188	6.512	0.54259	1.00000
RegionR8	-0.398	6.512	0.28266	0.90918

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.093	6.512	0.12794	0.86024
RegenerationR2	-0.124	6.512	0.71632	0.96222
RegenerationR3	-0.163	6.512	0.64942	0.92861
RegenerationR4	-0.016	6.512	0.96392	1.00000
RegenerationR5	-0.227	6.512	0.51485	0.86697
RegenerationR6	-0.521	6.512	0.14335	0.46388
RegenerationBL	-0.333	6.512	0.32268	0.68955
RegenerationTP	0.684	6.512	0.04908	0.36336

Genes with expression patterns similar to MligTC455_46846

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46846	4137	86.19	Mlig455_012141	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.322	GABARAPL2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_012141 {REF} {Length: 1542} {Pfam: Autophagy protein Atg8 ubiquitin like [PF02991.18, score=163.3]; Ubiquitin-like autophagy protein Apg12 [PF04110.15, score=25.7]} {Human: ENSG00000034713, GABARAPL2, GABA type A receptor associated protein like 2, [RH, Score=176, Expect=5e-58]} {Mouse: ENSMUSG00000031950, Gabarapl2, gamma-aminobutyric acid (GABA) A receptor-associated protein-like 2, [RH, Score=176, Expect=3e-58]} {Dmel: FBgn0052672, Atg8a, Autophagy-related 8a, [Score=147, Expect=6e-47]} {Celegans: WBGene00002980, lgg-1, [Score=149, Expect=1e-47]} {Smed: dd_Smed_v6_1441_0_1, dd_Smed_v6_1441_0_1, [RH, Score=174, Expect=2e-57]} {RNA1509_5004, RNA1509_55077} {RNA1310_34137, RNA1509_55077} {RNA1509_55077, RNA815_5885}
2.	MligTC455_34873	4345	90.52	Mlig455_008692	Neo: - Age: logFC(26M/2M)=-0.240 Regeneration-downregulated R6: -1.035 Regeneration-depleted R6: -1.035	CALM2	1.792	-	-	-	-	0.968	0.824	Mlig455_008692 {REF} {Length: 1875} {Pfam: EF hand [PF00036.34, score=122.3]; EF-hand domain pair [PF13499.8, score=114.4]; EF hand [PF13202.8, score=98.9]; EF-hand domain [PF13405.8, score=97.8]; EF-hand domain pair [PF13833.8, score=76.7]; Dockerin type I domain [PF00404.20, score=45.8]; EF-hand domain [PF14658.8, score=41.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=40.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.7]; EF-hand domain [PF08976.13, score=23.3]; Caleosin related protein [PF05042.15, score=18.7]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=139, Expect=6e-42]; ENSG00000160014, CALM3, calmodulin 3, [Score=138, Expect=3e-42]; ENSG00000198668, CALM1, calmodulin 1, [Score=138, Expect=3e-42]} {Mouse: ENSMUSG00000001175, Calm1, calmodulin 1, [Score=139, Expect=5e-42]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=138, Expect=2e-42]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=138, Expect=2e-42]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=135, Expect=2e-41]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=136, Expect=6e-42]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=136, Expect=5e-42]} {RNA1509_24073, RNA1509_32541, RNA1509_5234} {RNA1310_36831, RNA1509_24073, RNA1509_32541, RNA1509_5234} {RNA1509_24073, RNA1509_32541, RNA1509_5234, RNA815_17221.1}
3.	MligTC455_33664	285	5.95	Mlig455_070034	Neo: - Age: -	ADRA1A	1.707	-	0.750	-	-	0.957	-	Mlig455_070034 {REF} {Length: 2855} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=104.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=37.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=21.3]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=85.1, Expect=5e-17]; ENSG00000102195, GPR50, G protein-coupled receptor 50, [Score=82.4, Expect=5e-16]} {Mouse: ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=83.2, Expect=2e-16]} {Dmel: FBgn0025631, moody, [Score=89.0, Expect=2e-18]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=61.6, Expect=5e-10]} {Smed: dd_Smed_v6_54079_0_1, dd_Smed_v6_54079_0_1, [Score=69.7, Expect=9e-13]} {RNA1509_25254} {RNA1310_23746} {RNA815_34946}
4.	MligTC455_32324	309	6.44	Mlig455_046168	Neo: - Age: -		0.976	-	-	-	0.976	-	-	Mlig455_046168 {REF} {Length: 1585} {TRANSSPLICED} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=19.7]} {RNA1509_48029} {RNA1310_9236} {RNA815_30351}
5.	MligTC455_20658	197	4.11	Mlig455_038718, Mlig455_063446	Neo: - Age: -		0.972	-	-	-	-	0.972	-	Mlig455_038718 {REF} {Length: 1687} {NoTransDecoderORF} {RNA1509_18723} {RNA1310_2938.1} {RNA815_14343.1} Mlig455_063446 {REF} {Length: 394} {NoTransDecoderORF} {RNA1509_51071} {RNA1310_2938.1} {RNA815_14343.3}
6.	MligTC455_28142	254	5.3	Mlig455_011323, Mlig455_026058	Neo: - Age: -		0.971	-	-	-	-	0.971	-	Mlig455_011323 {REF} {Length: 2835} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_24716.1} {RNA815_11419.1} Mlig455_026058 {REF} {Length: 2664} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_24716.1} {RNA815_11419.1}
7.	MligTC455_21911	1207	25.15	Mlig455_003039, Mlig455_003244, Mlig455_003332, Mlig455_006723	Neo: - Age: -		0.965	-	-	-	0.965	-	-	Mlig455_003039 {REF} {Length: 5928} {TRANSSPLICED} {RNA1509_2395} {RNA1310_756} {RNA815_226} Mlig455_003244 {REF} {Length: 6672} {TRANSSPLICED} {RNA1509_16128, RNA1509_2395} {RNA1310_756, RNA1509_16128, RNA1509_2395} {RNA1509_16128, RNA1509_2395, RNA815_226} Mlig455_003332 {REF} {Length: 6599} {TRANSSPLICED} {RNA1509_2395} {RNA1310_756} {RNA815_226} Mlig455_006723 {REF} {Length: 463} {NoTransDecoderORF}
8.	MligTC455_28757	33753	703.18	Mlig455_047399	Neo: - Age: logFC(26M/2M)=2.751 Region-enriched R8: 1.310/0.02689 Regeneration-downregulated BL: -1.858 Regeneration-depleted BL: -1.858		0.96	-	-	-	-	0.960	-	Mlig455_047399 {REF} {Length: 383} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1068} {RNA1310_55229} {RNA815_18679}
9.	MligTC455_30659	7438	154.97	Mlig455_008135, Mlig455_012766, Mlig455_021205, Mlig455_026385, Mlig455_035726, Mlig455_035727, Mlig455_067397, Mlig455_070688, Mlig455_070937	Neo: - Age: Down-Up-Down Region-enriched R8: 1.647/0.04332	KMT5A	0.96	-	-	-	-	0.960	-	Mlig455_008135 {REF} {Length: 3237} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_012766 {REF} {Length: 4660} {TRANSSPLICED} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_021205 {REF} {Length: 3235} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_026385 {REF} {Length: 2839} {TRANSSPLICED} {RNA1509_44078} {RNA1310_33930} {RNA815_15022} Mlig455_035726 {REF} {Length: 1020} {Pfam: SET domain [PF00856.30, score=45.1]} {Human: ENSG00000183955, KMT5A, lysine methyltransferase 5A, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000049327, Kmt5a, lysine methyltransferase 5A, [Score=64.7, Expect=2e-11]} {Dmel: FBgn0011474, PR-Set7, PR/SET domain containing protein 7, [Score=76.6, Expect=3e-15]} {Celegans: WBGene00004781, set-1, Histone-lysine N-methyltransferase set-1, [Score=77.0, Expect=2e-16]} {Smed: dd_Smed_v6_5677_0_1, dd_Smed_v6_5677_0_1, [Score=78.2, Expect=2e-16]} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_035727 {REF} {Length: 2924} {TRANSSPLICED} {RNA1509_44078} {RNA1310_31019} {RNA815_15022} Mlig455_067397 {REF} {Length: 2535} {RNA1509_2996} {RNA1310_18007} {RNA815_15022} Mlig455_070688 {REF} {Length: 2537} {RNA1509_2996} {RNA1310_18007, RNA1509_2996} {RNA1509_2996, RNA815_15022} Mlig455_070937 {REF} {Length: 2433} {RNA1509_2996, RNA1509_31638} {RNA1310_18007, RNA1509_31638} {RNA1509_31638, RNA815_15022}
10.	MligTC455_25692	53	1.1	Mlig455_045797	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_045797 {REF} {Length: 9524} {RNA1509_55007} {RNA1310_32142, RNA1509_55007} {RNA1509_55007, RNA815_18496.1}
11.	MligTC455_28755	31590	658.11	Mlig455_000327	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.469 Region-enriched R8: 1.346/0.02236 Regeneration-downregulated BL: -1.871 Regeneration-depleted BL: -1.871	TRIM27	0.957	-	-	-	-	0.957	-	Mlig455_000327 {REF} {Length: 864} {Pfam: zinc finger of C3HC4-type, RING [PF15227.8, score=32.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.9]; RING-type zinc-finger [PF13445.8, score=27.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=26.5]; Ring finger domain [PF13639.8, score=22.7]; zinc-RING finger domain [PF14634.8, score=22.2]} {Human: ENSG00000215641, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000237071, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000204713, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000229006, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000234495, TRIM27, tripartite motif containing 27, [RH, Score=50.8, Expect=2e-07]; ENSG00000237462, TRIM27, tripartite motif containing 27, [RH, Score=50.4, Expect=1e-07]; ENSG00000233948, TRIM27, tripartite motif containing 27, [RH, Score=50.4, Expect=1e-07]} {Mouse: ENSMUSG00000021326, Trim27, tripartite motif-containing 27, [RH, Score=51.2, Expect=7e-08]} {RNA1509_13494} {RNA1310_30598} {RNA815_18679}
12.	MligTC455_28756	33722	702.55	Mlig455_041173	Neo: - Age: Up-Down-Up Region-enriched R8: 1.344/0.02990		0.955	-	-	-	-	0.955	-	Mlig455_041173 {REF} {Length: 15531} {Pfam: Integrase core domain [PF00665.28, score=41.2]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=63.9, Expect=5e-13]} {RNA1509_28643} {RNA1310_576.1} {RNA815_1671.1}
13.	MligTC455_30760	5612	116.91	Mlig455_006073, Mlig455_011942, Mlig455_052693	Neo: - Age: logFC(26M/2M)=1.042		0.954	-	-	-	-	0.954	-	Mlig455_006073 {REF} {Length: 1112} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1} Mlig455_011942 {REF} {Length: 1109} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200, RNA1509_21131} {RNA1310_29002, RNA1509_21131} {RNA1509_21131, RNA815_7853.1} Mlig455_052693 {REF} {Length: 1111} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_1200} {RNA1310_29002} {RNA815_7853.1}
14.	MligTC455_46217	213	4.43	Mlig455_057532	Neo: - Age: Down-Up-Down	RBPMS2	0.954	-	-	-	-	0.954	-	Mlig455_057532 {REF} {Length: 5470} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]} {Human: ENSG00000166831, RBPMS2, RNA binding protein, mRNA processing factor 2, [RH, Score=128, Expect=2e-35]} {Mouse: ENSMUSG00000031586, Rbpms, RNA binding protein gene with multiple splicing, [RH, Score=125, Expect=3e-35]} {Dmel: FBgn0263995, cpo, couch potato, [Score=164, Expect=7e-46]} {Celegans: WBGene00003172, mec-8, Mec-8 protein, [Score=124, Expect=4e-33]} {Smed: dd_Smed_v6_4296_0_4, dd_Smed_v6_4296_0_4, [Score=150, Expect=3e-43]} {RNA1509_30119} {RNA1310_16586.1} {RNA815_23894}
15.	MligTC455_19444	2615	54.48	Mlig455_002765, Mlig455_050252	Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=-0.567		0.953	-	-	-	0.953	-	-	Mlig455_002765 {REF} {Length: 718} {RNA1509_22419} {RNA1310_5535, RNA1509_22419} {RNA1509_22419, RNA815_6435} Mlig455_050252 {REF} {Length: 956} {RNA1509_22419} {RNA1310_5535} {RNA815_6435}
16.	MligTC455_51077	34	0.71	Mlig455_060577	Neo: - Age: -	ARFGEF3	0.953	-	-	-	0.953	-	-	Mlig455_060577 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: Dimerisation and cyclophilin-binding domain of Mon2 [PF16213.7, score=40.3]} {Human: ENSG00000112379, ARFGEF3, ARFGEF family member 3, [Score=82.0, Expect=7e-18]} {Mouse: ENSMUSG00000019852, Arfgef3, ARFGEF family member 3, [Score=82.0, Expect=5e-18]} {Celegans: WBGene00013711, Y106G6G.2, [Score=50.4, Expect=1e-07]} {RNA1509_14718} {RNA1310_30427} {RNA815_32671}
17.	MligTC455_30545	101	2.11	Mlig455_032498, Mlig455_068677	Neo: - Age: Up-Down-Down	CSPG4	0.952	-	-	-	0.952	-	-	Mlig455_032498 {REF} {Length: 8500} {Pfam: Cadherin-like [PF16184.7, score=468.0]; Laminin G domain [PF02210.26, score=118.8]; Laminin G domain [PF00054.25, score=91.4]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=19.3]} {Human: ENSG00000173546, CSPG4, chondroitin sulfate proteoglycan 4, [RH, Score=413, Expect=1e-115]} {Mouse: ENSMUSG00000021763, BC067074, cDNA sequence BC067074, [Score=470, Expect=3e-133]} {Dmel: FBgn0032683, kon, kon-tiki, [RH, Score=428, Expect=2e-120]} {Celegans: WBGene00016751, C48E7.6, [Score=149, Expect=2e-35]} {Smed: dd_Smed_v6_5187_0_1, dd_Smed_v6_5187_0_1, [Score=61.2, Expect=8e-09]} {RNA1509_13167} {RNA1310_367} {RNA815_2713} Mlig455_068677 {REF} {Length: 848} {Pfam: Cadherin-like [PF16184.7, score=468.0]; Laminin G domain [PF02210.26, score=118.8]; Laminin G domain [PF00054.25, score=91.4]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=19.3]} {Human: ENSG00000173546, CSPG4, chondroitin sulfate proteoglycan 4, [RH, Score=413, Expect=1e-115]} {Mouse: ENSMUSG00000021763, BC067074, cDNA sequence BC067074, [Score=470, Expect=3e-133]} {Dmel: FBgn0032683, kon, kon-tiki, [RH, Score=428, Expect=2e-120]} {Celegans: WBGene00016751, C48E7.6, [Score=149, Expect=2e-35]} {Smed: dd_Smed_v6_5187_0_1, dd_Smed_v6_5187_0_1, [Score=61.2, Expect=8e-09]} {RNA1509_13167} {RNA1310_367} {RNA815_21930}
18.	MligTC455_30251	170	3.54	Mlig455_065306	Neo: - Age: -		0.951	-	-	-	-	0.951	-	Mlig455_065306 {REF} {Length: 2067} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=28.7]} {Smed: dd_Smed_v6_2232_0_1, dd_Smed_v6_2232_0_1, [Score=46.6, Expect=2e-06]} {RNA1509_33034} {RNA1310_48677} {RNA815_43418.2}
19.	MligTC455_28758	32113	669.02	Mlig455_053395	Neo: - Age: - Region-enriched R8: 1.331/0.02340 Regeneration-downregulated BL: -1.855 Regeneration-depleted BL: -1.855	UBE2O	0.95	-	-	-	-	0.950	-	Mlig455_053395 {REF} {Length: 14273} {TRANSSPLICED} {Human: ENSG00000175931, UBE2O, ubiquitin conjugating enzyme E2 O, [Score=91.7, Expect=4e-18]} {Mouse: ENSMUSG00000020802, Ube2o, ubiquitin-conjugating enzyme E2O, [Score=92.8, Expect=1e-18]} {Dmel: FBgn0027512, CG10254, [Score=72.4, Expect=2e-12]} {Smed: dd_Smed_v6_9319_0_1, dd_Smed_v6_9319_0_1, [Score=105, Expect=7e-23]} {RNA1509_28643, RNA1509_5756} {RNA1310_576.1, RNA1509_5756} {RNA1509_5756, RNA815_1671.1}

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