M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_25704

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25704 268 5.59 Mlig455_023903

Neo: Int S/G2/M

Age: Down-Up-Up

Region-specific R5: 2.601

Region-enriched R5: 2.458/0.00000

 Mlig455_023903 {REF} {Length: 1074} {TRANSSPLICED} {Pfam: Glutaredoxin [PF00462.26, score=29.1]} {RNA1509_25303, RNA1509_28108} {RNA1310_46615, RNA1509_25303, RNA1509_28108} {RNA1509_25303, RNA1509_28108, RNA815_24571}

Cumulative graph for MligTC455_25704

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.729 3.028 0.17636 0.80348
RegionR2 -1.459 3.028 0.03310 0.20758
RegionR3 -0.77 3.028 0.17104 0.69701
RegionR4 1.064 3.028 0.08984 0.28618
RegionR5 2.458 3.028 0.00000 0.00000 Specific for R5: 2.601
RegionR6 -0.259 3.028 0.64390 1.00000
RegionR7 -1.152 3.028 0.13045 0.67991
RegionR8 -1.612 3.028 0.09165 0.57187

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.047 3.028 0.08017 0.77508
RegenerationR2 0.453 3.028 0.46500 0.85499
RegenerationR3 -0.195 3.028 0.75832 0.96707
RegenerationR4 -0.808 3.028 0.21143 0.65875
RegenerationR5 -1.77 3.028 0.00047 0.03543
RegenerationR6 -0.939 3.028 0.18519 0.52114
RegenerationBL -1.733 3.028 0.17932 0.50811
RegenerationTP -2.237 3.028 0.10455 0.50060


Genes with expression patterns similar to MligTC455_25704

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25704 268 5.59 Mlig455_023903

Neo: Int S/G2/M

Age: Down-Up-Up

Region-specific R5: 2.601

Region-enriched R5: 2.458/0.00000

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_023903 {REF} {Length: 1074} {TRANSSPLICED} {Pfam: Glutaredoxin [PF00462.26, score=29.1]} {RNA1509_25303, RNA1509_28108} {RNA1310_46615, RNA1509_25303, RNA1509_28108} {RNA1509_25303, RNA1509_28108, RNA815_24571}
2. MligTC455_22859 516 10.74 Mlig455_015295

Neo: Irradiation

Age: Down-Up-Up

Region-specific R5: 5.990

Region-enriched R5: 4.954/0.00000

 3.42 0.868 0.954 - - 0.849 0.749 Mlig455_015295 {REF} {Length: 1139} {Pfam: Universal stress protein family [PF00582.28, score=90.5]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=117, Expect=2e-33]} {RNA1509_27720, RNA1509_42484} {RNA1310_39052.1, RNA1509_42484} {RNA1509_42484, RNA815_19675}
3. MligTC455_39288 643 13.4 Mlig455_031540

Neo: -

Age: -

Region-enriched R5: 1.322/0.00011

 GDPD1 2.596 0.858 0.766 - - - 0.972 Mlig455_031540 {REF} {Length: 3145} {Pfam: Glycerophosphoryl diester phosphodiesterase family [PF03009.19, score=91.9]} {Human: ENSG00000153982, GDPD1, glycerophosphodiester phosphodiesterase domain containing 1, [RH, Score=267, Expect=1e-87]} {Mouse: ENSMUSG00000061666, Gdpd1, glycerophosphodiester phosphodiesterase domain containing 1, [RH, Score=257, Expect=1e-83]} {Smed: dd_Smed_v6_4493_0_2, dd_Smed_v6_4493_0_2, [RH, Score=283, Expect=6e-94]} {RNA1509_36212, RNA1509_46470} {RNA1310_7181.2, RNA1509_46470} {RNA1509_46470, RNA815_11831}
4. MligTC455_23225 291 6.06 Mlig455_024567

Neo: Germline

Age: -

Region-specific R5: 4.576

Region-enriched R5: 4.104/0.00000

 2.499 0.953 - - 0.723 - 0.823 Mlig455_024567 {REF} {Length: 2502} {Pfam: Innexin [PF00876.20, score=278.8]} {Dmel: FBgn0004646, ogre, optic ganglion reduced, [Score=100, Expect=5e-23]} {Celegans: WBGene00002133, inx-11, Innexin-11, [Score=176, Expect=1e-49]} {Smed: dd_Smed_v6_692_0_1, dd_Smed_v6_692_0_1, [Score=298, Expect=1e-96]} {RNA1509_35117, RNA1509_3673, RNA1509_38237} {RNA1310_9359.1, RNA1509_35117, RNA1509_3673, RNA1509_38237} {RNA1509_35117, RNA1509_3673, RNA1509_38237, RNA815_2969}
5. MligTC455_30406 127 2.64 Mlig455_008473

Neo: -

Age: Down-Up-Up

 CEBPD 1.915 - - 0.955 - - 0.960 Mlig455_008473 {REF} {Length: 3188} {Pfam: Basic region leucine zipper [PF07716.17, score=31.1]; bZIP transcription factor [PF00170.23, score=22.8]} {Human: ENSG00000221869, CEBPD, CCAAT enhancer binding protein delta, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000071637, Cebpd, CCAAT/enhancer binding protein (C/EBP), delta, [Score=52.8, Expect=1e-07]} {RNA1509_46169} {RNA1310_36388, RNA1509_46169} {RNA1509_46169, RNA815_32515}
6. MligTC455_23223 648 13.51 Mlig455_024413

Neo: Germline

Age: -

Region-enriched R5: 3.899/0.00000

 1.817 0.954 - - - - 0.863 Mlig455_024413 {REF} {Length: 2438} {Pfam: Innexin [PF00876.20, score=278.9]} {Dmel: FBgn0004646, ogre, optic ganglion reduced, [Score=99.4, Expect=1e-22]} {Celegans: WBGene00002133, inx-11, Innexin-11, [Score=176, Expect=9e-50]} {Smed: dd_Smed_v6_692_0_1, dd_Smed_v6_692_0_1, [Score=298, Expect=1e-96]} {RNA1509_3673} {RNA1310_9359.1} {RNA815_2969}
7. MligTC455_23224 315 6.57 Mlig455_024528

Neo: Germline

Age: -

Region-specific R5: 4.199

Region-enriched R5: 3.563/0.00000

 1.816 0.956 - - - - 0.860 Mlig455_024528 {REF} {Length: 2525} {Pfam: Innexin [PF00876.20, score=280.8]} {Dmel: FBgn0004646, ogre, optic ganglion reduced, [RH, Score=102, Expect=1e-23]} {Celegans: WBGene00002133, inx-11, Innexin-11, [Score=178, Expect=2e-50]} {Smed: dd_Smed_v6_692_0_1, dd_Smed_v6_692_0_1, [Score=296, Expect=3e-96]} {RNA1509_34125, RNA1509_3673} {RNA1310_9359.1, RNA1509_34125} {RNA1509_34125, RNA815_2969}
8. MligTC455_46636 534 11.12 Mlig455_010741

Neo: Irradiation

Age: -

Region-enriched R5: 1.180/0.01970

 REXO1 1.786 - - - - 0.834 0.952 Mlig455_010741 {REF} {Length: 2719} {Pfam: ElonginA binding-protein 1 [PF15870.7, score=69.4]; Exonuclease [PF00929.26, score=19.1]} {Human: ENSG00000079313, REXO1, RNA exonuclease 1 homolog, [RH, Score=248, Expect=1e-68]} {Mouse: ENSMUSG00000047417, Rexo1, REX1, RNA exonuclease 1, [RH, Score=276, Expect=1e-78]} {Dmel: FBgn0039544, CG12877, [RH, Score=209, Expect=1e-56]} {Celegans: WBGene00004095, pqe-1, Putative RNA exonuclease pqe-1, [RH, Score=162, Expect=9e-41]} {Smed: dd_Smed_v6_12081_0_1, dd_Smed_v6_12081_0_1, [Score=109, Expect=8e-25]} {RNA1509_10207} {RNA1310_5646.1} {RNA815_3852}
9. MligTC455_06896 145 3.03 Mlig455_042347

Neo: Int S/G2/M

Age: Down-Up-Up

 1.76 0.779 - - - 0.981 - Mlig455_042347 {REF} {Length: 2831} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=63.6]; HEAT-like repeat [PF13513.8, score=40.7]; HEAT repeats [PF13646.8, score=31.7]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=24.2]} {Smed: dd_Smed_v6_12536_0_1, dd_Smed_v6_12536_0_1, [RH, Score=328, Expect=4e-103]} {RNA1509_17415} {RNA1310_7392.3, RNA1509_17415} {RNA1509_17415, RNA815_4602}
10. MligTC455_48565 369 7.69 Mlig455_050968

Neo: -

Age: -

Region-specific R5: 2.171

Region-enriched R5: 1.645/0.00001

 1.756 0.950 - - - - 0.806 Mlig455_050968 {REF} {Length: 472} {NoTransDecoderORF} {RNA1509_25992} {RNA1310_89415.2, RNA1509_25992} {RNA1509_25992, RNA815_55479}
11. MligTC455_22283 538 11.22 Mlig455_067699

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R5: 1.149/0.04432

 1.726 0.760 - 0.966 - - - Mlig455_067699 {REF} {Length: 3961} {TRANSSPLICED} {Smed: dd_Smed_v6_4268_0_1, dd_Smed_v6_4268_0_1, [RH, Score=75.5, Expect=1e-15]} {RNA1509_21983} {RNA1310_15855} {RNA815_31364}
12. MligTC455_01297 70 1.46 Mlig455_042285

Neo: -

Age: -

 1.716 - - 0.970 - 0.746 - Mlig455_042285 {REF} {Length: 118} {NoTransDecoderORF}
13. MligTC455_39776 1144 23.84 Mlig455_053212, Mlig455_065058

Neo: Neoblast, stringent

Age: -

Region-specific R5: 2.245

Region-enriched R5: 1.733/0.00000
Region-enriched R4: 1.649/0.00127

 PLK1 1.71 0.965 0.745 - - - -

Mlig455_053212 {REF} {Length: 3361} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=146.5]; POLO box duplicated region [PF00659.20, score=127.0]; Kinase-like [PF14531.8, score=33.4]; Fungal protein kinase [PF17667.3, score=30.6]} {Human: ENSG00000166851, PLK1, polo like kinase 1, [RH, Score=594, Expect=0.0]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [RH, Score=614, Expect=0.0]} {Dmel: FBgn0003124, polo, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00004043, plk-2, Serine/threonine-protein kinase plk-2, [RH, Score=561, Expect=0.0]} {Smed: dd_Smed_v6_4273_0_1, dd_Smed_v6_4273_0_1, [RH, Score=500, Expect=2e-171]} {RNA1509_5301} {RNA1310_3713} {RNA815_3603}

Mlig455_065058 {REF} {Length: 3509} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=226.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=146.5]; POLO box duplicated region [PF00659.20, score=126.5]; Kinase-like [PF14531.8, score=33.4]; Fungal protein kinase [PF17667.3, score=30.6]} {Human: ENSG00000166851, PLK1, polo like kinase 1, [RH, Score=593, Expect=0.0]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [RH, Score=612, Expect=0.0]} {Dmel: FBgn0003124, polo, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00004043, plk-2, Serine/threonine-protein kinase plk-2, [RH, Score=561, Expect=0.0]} {Smed: dd_Smed_v6_4273_0_1, dd_Smed_v6_4273_0_1, [RH, Score=499, Expect=3e-171]} {RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301} {RNA1310_3713, RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301} {RNA1509_38334, RNA1509_44423, RNA1509_49051, RNA1509_5301, RNA815_3603}
14. MligTC455_39775 565 11.77 Mlig455_051815

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 1.729/0.00000
Region-enriched R4: 1.615/0.00542

 PLK1 1.705 0.964 0.741 - - - - Mlig455_051815 {REF} {Length: 2862} {Pfam: POLO box duplicated region [PF00659.20, score=67.1]; Protein kinase domain [PF00069.27, score=55.6]} {Human: ENSG00000166851, PLK1, polo like kinase 1, [Score=261, Expect=2e-80]} {Mouse: ENSMUSG00000030867, Plk1, polo like kinase 1, [Score=265, Expect=4e-82]} {Dmel: FBgn0003124, polo, [Score=192, Expect=6e-55]} {Celegans: WBGene00004043, plk-2, Serine/threonine-protein kinase plk-2, [Score=216, Expect=1e-63]} {Smed: dd_Smed_v6_4273_0_1, dd_Smed_v6_4273_0_1, [Score=198, Expect=2e-57]} {RNA1509_49051} {RNA1310_4665} {RNA815_3603}
15. MligTC455_19706 198 4.12 Mlig455_049566

Neo: Int S/G2/M

Age: -

 DNA2 1.654 0.951 - - - - 0.703 Mlig455_049566 {REF} {Length: 5005} {TRANSSPLICED} {Pfam: AAA domain [PF13087.8, score=141.8]; DNA replication factor Dna2 [PF08696.13, score=130.0]; AAA domain [PF13086.8, score=117.0]; AAA domain [PF13604.8, score=53.2]; AAA domain [PF13245.8, score=31.7]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=20.1]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=19.6]; AAA domain [PF13481.8, score=18.3]} {Human: ENSG00000138346, DNA2, DNA replication helicase/nuclease 2, [RH, Score=411, Expect=2e-124]} {Mouse: ENSMUSG00000036875, Dna2, DNA replication helicase/nuclease 2, [RH, Score=416, Expect=2e-126]} {Dmel: FBgn0030170, CG2990, [RH, Score=364, Expect=3e-107]} {Celegans: WBGene00001016, dna-2, Yeast DNA helicase/endonuclease family, [RH, Score=351, Expect=7e-103]} {Smed: dd_Smed_v6_12638_0_1, dd_Smed_v6_12638_0_1, [RH, Score=404, Expect=1e-121]} {RNA1509_15095} {RNA1310_5852, RNA1509_15095} {RNA1509_15095, RNA815_1653.1}
16. MligTC455_23702 932 19.42 Mlig455_025318

Neo: Int S/G2/M

Age: -

 PPIH 0.985 - - 0.985 - - - Mlig455_025318 {REF} {Length: 781} {TRANSSPLICED} {Pfam: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD [PF00160.23, score=155.1]} {Human: ENSG00000171960, PPIH, peptidylprolyl isomerase H, [Score=285, Expect=3e-99]} {Mouse: ENSMUSG00000060288, Ppih, peptidyl prolyl isomerase H, [Score=285, Expect=2e-99]; ENSMUSG00000033036, Gm7879, predicted pseudogene 7879, [Score=285, Expect=2e-99]} {Dmel: FBgn0033089, CG17266, [Score=265, Expect=2e-91]} {Celegans: WBGene00000887, cyn-11, Peptidyl-prolyl cis-trans isomerase 11, [Score=247, Expect=2e-84]} {Smed: dd_Smed_v6_2417_0_2, dd_Smed_v6_2417_0_2, [Score=228, Expect=2e-77]} {RNA1509_9399} {RNA1310_41114} {RNA815_21576}
17. MligTC455_12978 63 1.31 Mlig455_023948

Neo: -

Age: -

 0.981 - - 0.981 - - - Mlig455_023948 {REF} {Length: 2929} {RNA1310_80095.1}
18. MligTC455_43404 387 8.06 Mlig455_018715

Neo: -

Age: Down-Up-Down

 0.978 - - 0.978 - - - Mlig455_018715 {REF} {Length: 2067} {TRANSSPLICED} {RNA1509_11398, RNA1509_39356} {RNA1310_877.1, RNA1509_39356} {RNA1509_39356, RNA815_21988}
19. MligTC455_19050 594 12.37 Mlig455_009401

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.557

 0.977 - - 0.977 - - - Mlig455_009401 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: NADAR domain [PF08719.13, score=172.3]} {Celegans: WBGene00020747, T24A6.7, [RH, Score=126, Expect=5e-37]} {Smed: dd_Smed_v6_17652_0_1, dd_Smed_v6_17652_0_1, [RH, Score=176, Expect=4e-57]} {RNA1509_18595, RNA1509_28040} {RNA1310_53361.2, RNA1509_18595, RNA1509_28040} {RNA1509_18595, RNA1509_28040, RNA815_30431}
20. MligTC455_21316 618 12.87 Mlig455_045715

Neo: -

Age: -

Region-enriched R4: 1.535/0.00471

 VPS35L 0.972 - - 0.972 - - - Mlig455_045715 {REF} {Length: 4101} {TRANSSPLICED} {Human: ENSG00000103544, VPS35L, VPS35 endosomal protein sorting factor like, [RH, Score=478, Expect=4e-152]} {Mouse: ENSMUSG00000030982, Vps35l, VPS35 endosomal protein sorting factor like, [RH, Score=478, Expect=4e-152]} {Dmel: FBgn0037622, CG8202, [RH, Score=367, Expect=5e-111]} {Celegans: WBGene00017837, F26G1.1, [RH, Score=132, Expect=3e-31]} {Smed: dd_Smed_v6_5533_0_1, dd_Smed_v6_5533_0_1, [RH, Score=393, Expect=2e-121]} {RNA1509_32593, RNA1509_6567} {RNA1310_2706.1, RNA1509_32593, RNA1509_6567} {RNA1509_32593, RNA1509_6567, RNA815_3135}
21. MligTC455_22178 202 4.2 Mlig455_025439, Mlig455_025448

Neo: -

Age: Up-Down-Down

Region-enriched R6: 2.965/0.00017

 CREBL2 0.972 - - 0.972 - - -

Mlig455_025439 {REF} {Length: 5491} {Human: ENSG00000111269, CREBL2, cAMP responsive element binding protein like 2, [RH, Score=47.8, Expect=2e-06]} {Mouse: ENSMUSG00000032652, Crebl2, cAMP responsive element binding protein-like 2, [RH, Score=47.8, Expect=2e-06]} {Dmel: FBgn0032202, REPTOR-BP, REPTOR-binding partner, [RH, Score=47.0, Expect=2e-06]} {RNA1509_46406} {RNA1310_60800} {RNA815_57151}

Mlig455_025448 {REF} {Length: 2172} {Human: ENSG00000111269, CREBL2, cAMP responsive element binding protein like 2, [RH, Score=47.8, Expect=2e-06]} {Mouse: ENSMUSG00000032652, Crebl2, cAMP responsive element binding protein-like 2, [RH, Score=47.8, Expect=2e-06]} {Dmel: FBgn0032202, REPTOR-BP, REPTOR-binding partner, [RH, Score=47.8, Expect=1e-06]} {RNA1310_60800} {RNA815_57151}
22. MligTC455_32087 356 7.41 Mlig455_006815, Mlig455_055191

Neo: -

Age: -

 0.972 - - 0.972 - - -

Mlig455_006815 {REF} {Length: 2436} {RNA1509_42275} {RNA1310_5257.1, RNA1509_42275} {RNA1509_42275, RNA815_4711}

Mlig455_055191 {REF} {Length: 2731} {Pfam: Ribosomal protein L11, N-terminal domain [PF03946.16, score=18.8]} {RNA1509_56522, RNA1509_56687} {RNA1310_5257.1, RNA1509_56522, RNA1509_56687} {RNA1509_56522, RNA1509_56687, RNA815_4711}
23. MligTC455_27121 181 3.78 Mlig455_009362

Neo: -

Age: logFC(26M/2M)=-0.602

 0.971 - - 0.971 - - - Mlig455_009362 {REF} {Length: 2437} {RNA1509_58276} {RNA1310_7750.2} {RNA815_1043.2}
24. MligTC455_22771 181 3.77 Mlig455_004940, Mlig455_019717

Neo: -

Age: -

 0.968 - - 0.968 - - -

Mlig455_004940 {REF} {Length: 1700} {RNA1310_31549} {RNA815_46068}

Mlig455_019717 {REF} {Length: 2555} {RNA1310_28033.1} {RNA815_46068}
25. MligTC455_45067 113 2.35 Mlig455_008471

Neo: -

Age: -

 DICER1 0.967 - - - - 0.967 - Mlig455_008471 {REF} {Length: 4449} {Pfam: Ribonuclease III domain [PF00636.28, score=124.3]; Ribonuclease-III-like [PF14622.8, score=63.0]; Dicer dimerisation domain [PF03368.16, score=49.0]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=152, Expect=7e-37]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=157, Expect=2e-38]} {Dmel: FBgn0039016, Dcr-1, Dicer-1, [Score=173, Expect=2e-43]} {Celegans: WBGene00000939, dcr-1, Endoribonuclease dcr-1, [Score=176, Expect=2e-44]} {Smed: dd_Smed_v6_8502_0_1, dd_Smed_v6_8502_0_1, [Score=226, Expect=1e-60]} {RNA1509_8443} {RNA1310_1036} {RNA815_2656}
26. MligTC455_33284 294 6.13 Mlig455_051124

Neo: Irradiation

Age: logFC(26M/2M)=0.397

 0.966 - - 0.966 - - - Mlig455_051124 {REF} {Length: 5233} {Mouse: ENSMUSG00000031620, Iqcm, IQ motif containing M, [RH, Score=122, Expect=8e-29]} {Celegans: WBGene00018631, F49D11.7, [Score=50.1, Expect=1e-07]} {RNA1509_32167, RNA1509_35916, RNA1509_7353} {RNA1310_961, RNA1509_32167, RNA1509_35916} {RNA1509_32167, RNA1509_35916, RNA815_252.1}
27. MligTC455_51504 792 16.5 Mlig455_030064

Neo: -

Age: -

 DTX3 0.965 - - 0.965 - - - Mlig455_030064 {REF} {Length: 1763} {Pfam: Deltex C-terminal domain [PF18102.3, score=137.3]} {Human: ENSG00000178498, DTX3, deltex E3 ubiquitin ligase 3, [Score=130, Expect=4e-34]; ENSG00000163840, DTX3L, deltex E3 ubiquitin ligase 3L, [Score=128, Expect=6e-32]} {Mouse: ENSMUSG00000040415, Dtx3, deltex 3, E3 ubiquitin ligase, [Score=131, Expect=7e-35]; ENSMUSG00000049502, Dtx3l, deltex 3-like, E3 ubiquitin ligase, [Score=125, Expect=5e-31]} {Dmel: FBgn0000524, dx, deltex, [Score=85.1, Expect=1e-17]} {RNA1509_43676, RNA1509_5594} {RNA1310_5119.1, RNA1509_43676} {RNA1509_43676, RNA815_4008}
28. MligTC455_29024 2325 48.43 Mlig455_051078

Neo: Irradiation

Age: Up-Down-Down

 0.964 - - 0.964 - - - Mlig455_051078 {REF} {Length: 906} {RNA1509_5369} {RNA1310_10116.1} {RNA815_54294}
29. MligTC455_38086 3876 80.76 Mlig455_044474, Mlig455_046754

Neo: -

Age: Up-Down-Up

Region-enriched R1: 3.659/0.00863

 ZNF347 0.964 - - 0.964 - - -

Mlig455_044474 {REF} {Length: 431} {Pfam: C2H2-type zinc finger [PF13894.8, score=25.7]} {RNA1509_7797} {RNA1310_1145} {RNA815_22627}

Mlig455_046754 {REF} {Length: 5818} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=86.8]; C2H2-type zinc finger [PF13894.8, score=73.9]; C2H2-type zinc finger [PF13912.8, score=39.9]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.3]} {Human: ENSG00000197937, ZNF347, zinc finger protein 347, [Score=81.3, Expect=8e-15]} {Mouse: ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=72.8, Expect=2e-12]; ENSMUSG00000037640, Zfp60, zinc finger protein 60, [Score=70.9, Expect=8e-12]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=70.5, Expect=8e-12]} {Dmel: FBgn0028647, CG11902, [Score=57.8, Expect=7e-08]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=53.1, Expect=1e-06]} {RNA1509_7797} {RNA1310_1145} {RNA815_319.1}
30. MligTC455_19561 531 11.06 Mlig455_039149

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.373

 MRPL39 0.962 - - 0.962 - - - Mlig455_039149 {REF} {Length: 1835} {TRANSSPLICED} {Pfam: TGS domain [PF02824.23, score=33.1]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=19.1]} {Human: ENSG00000154719, MRPL39, mitochondrial ribosomal protein L39, [RH, Score=181, Expect=2e-53]} {Mouse: ENSMUSG00000022889, Mrpl39, mitochondrial ribosomal protein L39, [RH, Score=190, Expect=3e-57]} {Dmel: FBgn0036462, mRpL39, mitochondrial ribosomal protein L39, [RH, Score=195, Expect=5e-59]} {Smed: dd_Smed_v6_7576_0_1, dd_Smed_v6_7576_0_1, [RH, Score=188, Expect=9e-57]} {RNA1509_9497} {RNA1310_16310, RNA1509_9497} {RNA1509_9497, RNA815_7406}
31. MligTC455_19866 483 10.05 Mlig455_053987

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.360

Region-enriched R4: 2.346/0.01408
Region-enriched R3: 2.007/0.01395

 0.962 - - 0.962 - - - Mlig455_053987 {REF} {Length: 3038} {RNA1509_43528} {RNA1310_35262.2, RNA1509_43528} {RNA1509_43528, RNA815_26662}
32. MligTC455_48099 43 0.89 Mlig455_021066

Neo: -

Age: -

 ING4 0.962 - - - - - 0.962 Mlig455_021066 {REF} {Length: 1798} {TRANSSPLICED} {Pfam: Inhibitor of growth proteins N-terminal histone-binding [PF12998.9, score=97.8]; PHD-finger [PF00628.31, score=27.6]} {Human: ENSG00000111653, ING4, inhibitor of growth family member 4, [RH, Score=255, Expect=1e-84]; ENSG00000168395, ING5, inhibitor of growth family member 5, [RH, Score=244, Expect=2e-80]} {Mouse: ENSMUSG00000026283, Ing5, inhibitor of growth family, member 5, [RH, Score=257, Expect=7e-86]} {Dmel: FBgn0032516, Ing5, Inhibitor of growth family member 5, [RH, Score=238, Expect=1e-77]} {Celegans: WBGene00013095, ing-3, Inhibitor of growth protein, [RH, Score=79.3, Expect=2e-16]} {Smed: dd_Smed_v6_7721_0_1, dd_Smed_v6_7721_0_1, [Score=203, Expect=1e-64]} {RNA1509_42044} {RNA1310_33909} {RNA815_36432}
33. MligTC455_44726 315 6.57 Mlig455_010903

Neo: -

Age: -

 CLCN3 0.96 - - 0.960 - - - Mlig455_010903 {REF} {Length: 3753} {Pfam: Voltage gated chloride channel [PF00654.22, score=265.7]; CBS domain [PF00571.30, score=45.5]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=695, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=679, Expect=0.0]; ENSG00000171365, CLCN5, chloride voltage-gated channel 5, [Score=662, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=696, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=677, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [Score=690, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [Score=588, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=642, Expect=0.0]} {RNA1509_27287} {RNA1310_201.2} {RNA815_18093}
34. MligTC455_48630 325 6.78 Mlig455_039234

Neo: -

Age: -

 0.958 - - 0.958 - - - Mlig455_039234 {REF} {Length: 1660} {Pfam: TIR domain [PF13676.8, score=55.7]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [Score=63.5, Expect=3e-12]} {RNA1509_25970} {RNA1310_5526} {RNA815_2549.1}
35. MligTC455_53706 14 0.28 Mlig455_025956

Neo: -

Age: Down-Down-Up

 GTF2F2 0.958 - - - - - 0.958 Mlig455_025956 {REF} {Length: 2660} {TRANSSPLICED} {Pfam: TFIIF, beta subunit HTH domain [PF02270.17, score=79.3]; TFIIF, beta subunit N-terminus [PF17683.3, score=40.0]} {Human: ENSG00000188342, GTF2F2, general transcription factor IIF subunit 2, [RH, Score=176, Expect=5e-53]} {Mouse: ENSMUSG00000067995, Gtf2f2, general transcription factor IIF, polypeptide 2, [RH, Score=174, Expect=1e-52]} {Dmel: FBgn0010421, TfIIFbeta, Transcription factor TFIIFbeta, [RH, Score=164, Expect=3e-48]} {Celegans: WBGene00012694, Y39B6A.36, General transcription factor IIF subunit 2, [RH, Score=130, Expect=1e-35]} {Smed: dd_Smed_v6_2142_0_1, dd_Smed_v6_2142_0_1, [RH, Score=95.1, Expect=1e-22]} {RNA1509_11554} {RNA1310_14522} {RNA815_1242.1}
36. MligTC455_18104 454 9.45 Mlig455_039777

Neo: -

Age: -

 SLC35C2 0.957 - - 0.957 - - - Mlig455_039777 {REF} {Length: 2871} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=71.9]; UAA transporter family [PF08449.13, score=35.9]; EamA-like transporter family [PF00892.22, score=22.3]} {Human: ENSG00000080189, SLC35C2, solute carrier family 35 member C2, [RH, Score=313, Expect=1e-104]} {Mouse: ENSMUSG00000017664, Slc35c2, solute carrier family 35, member C2, [RH, Score=298, Expect=9e-99]} {Dmel: FBgn0035449, CG14971, [RH, Score=275, Expect=1e-88]} {Celegans: WBGene00021637, Y47G6A.7, [Score=223, Expect=1e-69]} {Smed: dd_Smed_v6_10022_0_1, dd_Smed_v6_10022_0_1, [Score=362, Expect=3e-124]} {RNA1509_11424} {RNA1310_9746, RNA1509_11424} {RNA1509_11424, RNA815_4547}
37. MligTC455_47886 409 8.53 Mlig455_052268, Mlig455_052359

Neo: -

Age: Up-Down-Down

 0.956 - - 0.956 - - -

Mlig455_052268 {REF} {Length: 3338} {RNA1509_40745} {RNA1310_7619} {RNA815_36192}

Mlig455_052359 {REF} {Length: 5246} {RNA1509_40745} {RNA1310_7619, RNA1509_40745} {RNA1509_40745, RNA815_36192}
38. MligTC455_42072 485 10.11 Mlig455_055419

Neo: -

Age: Up-Down-Up

 0.955 - - 0.955 - - - Mlig455_055419 {REF} {Length: 2038} {TRANSSPLICED} {Pfam: N-formylglutamate amidohydrolase [PF05013.14, score=26.2]} {RNA1509_11465} {RNA1310_15579.1} {RNA815_20172}
39. MligTC455_46340 259 5.4 Mlig455_049774

Neo: -

Age: -

Region-enriched R1: 5.320/0.00375

 0.955 - - 0.955 - - - Mlig455_049774 {REF} {Length: 1638} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=40.1]; Ankyrin repeats (many copies) [PF13637.8, score=27.8]; Ankyrin repeats (many copies) [PF13857.8, score=24.8]; Ankyrin repeat [PF13606.8, score=19.1]} {Smed: dd_Smed_v6_29956_0_1, dd_Smed_v6_29956_0_1, [RH, Score=75.9, Expect=1e-14]} {RNA1509_39973} {RNA1310_21889} {RNA815_13094}
40. MligTC455_48649 2564 53.41 Mlig455_042106

Neo: Neoblast, stringent

Age: Down-Up-Up

Region-enriched R5: 1.430/0.00000

 CKS2 0.954 - 0.954 - - - - Mlig455_042106 {REF} {Length: 951} {Pfam: Cyclin-dependent kinase regulatory subunit [PF01111.21, score=105.4]} {Human: ENSG00000123975, CKS2, CDC28 protein kinase regulatory subunit 2, [RH, Score=99.0, Expect=2e-28]} {Mouse: ENSMUSG00000062248, Cks2, CDC28 protein kinase regulatory subunit 2, [RH, Score=99.4, Expect=1e-28]} {Dmel: FBgn0037613, Cks85A, Cyclin-dependent kinase subunit 85A, [RH, Score=95.1, Expect=5e-27]} {Celegans: WBGene00001051, cks-1, Cyclin-dependent kinases regulatory subunit, [RH, Score=100, Expect=4e-29]} {Smed: dd_Smed_v6_6668_0_1, dd_Smed_v6_6668_0_1, [Score=107, Expect=6e-32]} {RNA1509_14224, RNA1509_28981, RNA1509_56838, RNA1509_9629} {RNA1310_23784, RNA1509_14224, RNA1509_28981, RNA1509_56838, RNA1509_9629} {RNA1509_14224, RNA1509_28981, RNA1509_56838, RNA1509_9629, RNA815_10824}
41. MligTC455_26999 330 6.88 Mlig455_037719, Mlig455_037789

Neo: -

Age: -

 RBM12B 0.953 - - 0.953 - - -

Mlig455_037719 {REF} {Length: 3624} {Pfam: Mitochondrial distribution and morphology protein 10 [PF12519.10, score=19.6]} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=58.9, Expect=4e-08]} {RNA1509_40809} {RNA1310_8203} {RNA815_13132}

Mlig455_037789 {REF} {Length: 3262} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=61.2, Expect=7e-09]} {RNA1310_8203} {RNA815_13132}
42. MligTC455_49110 155 3.23 Mlig455_006529, Mlig455_006645

Neo: -

Age: -

Region-enriched R4: 3.272/0.04020

 0.953 - - - - - 0.953

Mlig455_006529 {REF} {Length: 4092} {TRANSSPLICED} {RNA1509_48868} {RNA1310_23809.1, RNA1509_48868} {RNA1509_48868, RNA815_16307}

Mlig455_006645 {REF} {Length: 4921} {Pfam: Transmembrane family 220, helix [PF15071.8, score=60.7]} {Mouse: ENSMUSG00000050270, Tmem220, transmembrane protein 220, [RH, Score=65.9, Expect=4e-12]} {RNA1509_48868} {RNA1310_23809.1} {RNA815_16307}
43. MligTC455_09216 96 2.01 Mlig455_031519, Mlig455_035131, Mlig455_035136

Neo: -

Age: -

 ELP3 0.952 - - - - - 0.952

Mlig455_031519 {REF} {Length: 1005} {TRANSSPLICED} {Human: ENSG00000134014, ELP3, elongator acetyltransferase complex subunit 3, [Score=248, Expect=7e-78]} {Mouse: ENSMUSG00000022031, Elp3, elongator acetyltransferase complex subunit 3, [Score=246, Expect=3e-77]} {Dmel: FBgn0031604, Elp3, Elongator complex protein 3, [Score=233, Expect=3e-72]} {Celegans: WBGene00014123, elpc-3, Probable elongator complex protein 3, [Score=251, Expect=3e-79]} {Smed: dd_Smed_v6_3310_0_1, dd_Smed_v6_3310_0_1, [Score=232, Expect=4e-72]} {RNA1509_12612} {RNA1310_65720} {RNA815_5388}

Mlig455_035131 {REF} {Length: 1932} {TRANSSPLICED} {Pfam: Radical_SAM C-terminal domain [PF16199.7, score=116.2]; Radical SAM superfamily [PF04055.23, score=79.7]; Acetyltransferase (GNAT) family [PF00583.27, score=37.3]; Acetyltransferase (GNAT) domain [PF13673.9, score=22.7]} {Human: ENSG00000134014, ELP3, elongator acetyltransferase complex subunit 3, [RH, Score=919, Expect=0.0]} {Mouse: ENSMUSG00000022031, Elp3, elongator acetyltransferase complex subunit 3, [RH, Score=910, Expect=0.0]} {Dmel: FBgn0031604, Elp3, Elongator complex protein 3, [RH, Score=909, Expect=0.0]} {Celegans: WBGene00014123, elpc-3, Probable elongator complex protein 3, [RH, Score=891, Expect=0.0]} {Smed: dd_Smed_v6_3310_0_1, dd_Smed_v6_3310_0_1, [RH, Score=897, Expect=0.0]} {RNA1509_12612, RNA1509_20617, RNA1509_59978} {RNA1310_14491, RNA1509_20617, RNA1509_59978} {RNA1509_20617, RNA1509_59978, RNA815_5388}

Mlig455_035136 {REF} {Length: 2746} {TRANSSPLICED} {RNA1509_17690} {RNA1310_14491} {RNA815_5388}
44. MligTC455_26309 196 4.08 Mlig455_042028

Neo: -

Age: Up-Down-Up

 NAPA 0.952 - - 0.952 - - - Mlig455_042028 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=172.8]; Tetratricopeptide repeat [PF13424.8, score=22.3]} {Human: ENSG00000105402, NAPA, NSF attachment protein alpha, [Score=84.7, Expect=2e-18]} {Dmel: FBgn0250791, alphaSnap, alpha Soluble NSF attachment protein, [Score=59.7, Expect=6e-10]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=129, Expect=2e-35]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=110, Expect=2e-28]} {RNA1509_25414} {RNA1310_23320} {RNA815_19489}
45. MligTC455_52271 442 9.21 Mlig455_044899, Mlig455_044954

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.166/0.01750

 0.951 0.951 - - - - -

Mlig455_044899 {REF} {Length: 3925} {TRANSSPLICED} {Pfam: Integrator complex subunit 5 N-terminus [PF14837.8, score=69.6]; Integrator complex subunit 5 C-terminus [PF14838.8, score=36.7]} {RNA1509_18961, RNA1509_42628} {RNA1310_6813, RNA1509_42628} {RNA1509_42628, RNA815_13770}

Mlig455_044954 {REF} {Length: 3888} {TRANSSPLICED} {Pfam: Integrator complex subunit 5 N-terminus [PF14837.8, score=69.6]; Integrator complex subunit 5 C-terminus [PF14838.8, score=37.1]} {RNA1509_18961} {RNA1310_6813, RNA1509_18961} {RNA1509_18961, RNA815_13770}
46. MligTC455_23355 380 7.91 Mlig455_047433

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 1.922/0.03999

Regeneration-upregulated BL: 4.169

Regeneration-enriched BL: 4.169

 GEMIN5 0.95 0.950 - - - - - Mlig455_047433 {REF} {Length: 4789} {Pfam: WD domain, G-beta repeat [PF00400.34, score=57.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=33.3]} {Human: ENSG00000082516, GEMIN5, gem nuclear organelle associated protein 5, [RH, Score=284, Expect=2e-77]} {Mouse: ENSMUSG00000037275, Gemin5, gem nuclear organelle associated protein 5, [RH, Score=290, Expect=1e-79]} {Dmel: FBgn0033526, Caf1-105, Chromatin assembly factor 1, p105 subunit, [Score=62.0, Expect=4e-09]} {Celegans: WBGene00021074, W07E6.2, [Score=56.6, Expect=3e-09]} {Smed: dd_Smed_v6_3438_0_1, dd_Smed_v6_3438_0_1, [Score=57.4, Expect=4e-08]} {RNA1509_10687} {RNA1310_1434.1} {RNA815_13032}
47. MligTC455_36226 789 16.43 Mlig455_028917

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.621

 0.95 - - 0.950 - - - Mlig455_028917 {REF} {Length: 6194} {RNA1509_4302} {RNA1310_558} {RNA815_13710}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA