M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_30406

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30406 127 2.64 Mlig455_008473

Neo: -

Age: Down-Up-Up

 CEBPD Mlig455_008473 {REF} {Length: 3188} {Pfam: Basic region leucine zipper [PF07716.17, score=31.1]; bZIP transcription factor [PF00170.23, score=22.8]} {Human: ENSG00000221869, CEBPD, CCAAT enhancer binding protein delta, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000071637, Cebpd, CCAAT/enhancer binding protein (C/EBP), delta, [Score=52.8, Expect=1e-07]} {RNA1509_46169} {RNA1310_36388, RNA1509_46169} {RNA1509_46169, RNA815_32515}

Cumulative graph for MligTC455_30406

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.384 1.748 0.12410 0.71803
RegionR2 0.624 1.748 0.45442 0.84209
RegionR3 -0.015 1.748 0.79793 1.00000
RegionR4 1.79 1.748 0.03881 0.16221
RegionR5 1.147 1.748 0.12763 0.36142
RegionR6 -0.631 1.748 0.95358 1.00000
RegionR7 0.405 1.748 0.61765 1.00000
RegionR8 -5.704 1.748 0.04121 0.39861

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.423 1.748 0.05742 0.72174
RegenerationR2 -2.287 1.748 0.00032 0.02396
RegenerationR3 -1.26 1.748 0.11783 0.53468
RegenerationR4 -2.596 1.748 0.00060 0.02457
RegenerationR5 -2.002 1.748 0.00334 0.10235
RegenerationR6 -0.585 1.748 0.56312 0.84757
RegenerationBL -0.214 1.748 0.84177 1.00000
RegenerationTP 0.987 1.748 0.60876 0.96616


Genes with expression patterns similar to MligTC455_30406

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30406 127 2.64 Mlig455_008473

Neo: -

Age: Down-Up-Up

 CEBPD 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_008473 {REF} {Length: 3188} {Pfam: Basic region leucine zipper [PF07716.17, score=31.1]; bZIP transcription factor [PF00170.23, score=22.8]} {Human: ENSG00000221869, CEBPD, CCAAT enhancer binding protein delta, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000071637, Cebpd, CCAAT/enhancer binding protein (C/EBP), delta, [Score=52.8, Expect=1e-07]} {RNA1509_46169} {RNA1310_36388, RNA1509_46169} {RNA1509_46169, RNA815_32515}
2. MligTC455_25704 268 5.59 Mlig455_023903

Neo: Int S/G2/M

Age: Down-Up-Up

Region-specific R5: 2.601

Region-enriched R5: 2.458/0.00000

 1.915 - - 0.955 - - 0.960 Mlig455_023903 {REF} {Length: 1074} {TRANSSPLICED} {Pfam: Glutaredoxin [PF00462.26, score=29.1]} {RNA1509_25303, RNA1509_28108} {RNA1310_46615, RNA1509_25303, RNA1509_28108} {RNA1509_25303, RNA1509_28108, RNA815_24571}
3. MligTC455_27121 181 3.78 Mlig455_009362

Neo: -

Age: logFC(26M/2M)=-0.602

 1.688 - - 0.977 - 0.711 - Mlig455_009362 {REF} {Length: 2437} {RNA1509_58276} {RNA1310_7750.2} {RNA815_1043.2}
4. MligTC455_12978 63 1.31 Mlig455_023948

Neo: -

Age: -

 1.687 - - 0.981 - - 0.706 Mlig455_023948 {REF} {Length: 2929} {RNA1310_80095.1}
5. MligTC455_47610 1183 24.64 Mlig455_031962, Mlig455_032013

Neo: -

Age: -

 BBOX1 1.668 - - 0.950 - 0.718 -

Mlig455_031962 {REF} {Length: 1879} {TRANSSPLICED} {Pfam: Taurine catabolism dioxygenase TauD, TfdA family [PF02668.18, score=142.7]; Gamma-butyrobetaine hydroxylase-like, N-terminal [PF06155.14, score=40.5]} {Human: ENSG00000129151, BBOX1, gamma-butyrobetaine hydroxylase 1, [Score=221, Expect=1e-67]} {Mouse: ENSMUSG00000041660, Bbox1, butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase), [Score=228, Expect=2e-70]} {Dmel: FBgn0030575, CG5321, [Score=234, Expect=3e-72]} {Celegans: WBGene00001522, gbh-1, Probable gamma-butyrobetaine dioxygenase, [Score=155, Expect=2e-42]} {Smed: dd_Smed_v6_42907_0_1, dd_Smed_v6_42907_0_1, [Score=64.3, Expect=2e-11]} {RNA1509_19035} {RNA1310_2841} {RNA815_6735}

Mlig455_032013 {REF} {Length: 1884} {TRANSSPLICED} {Pfam: Taurine catabolism dioxygenase TauD, TfdA family [PF02668.18, score=142.7]; Gamma-butyrobetaine hydroxylase-like, N-terminal [PF06155.14, score=40.5]} {Human: ENSG00000129151, BBOX1, gamma-butyrobetaine hydroxylase 1, [Score=221, Expect=1e-67]} {Mouse: ENSMUSG00000041660, Bbox1, butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase), [Score=228, Expect=2e-70]} {Dmel: FBgn0030575, CG5321, [Score=234, Expect=3e-72]} {Celegans: WBGene00001522, gbh-1, Probable gamma-butyrobetaine dioxygenase, [Score=155, Expect=2e-42]} {Smed: dd_Smed_v6_42907_0_1, dd_Smed_v6_42907_0_1, [Score=64.3, Expect=2e-11]} {RNA1509_12207, RNA1509_19035, RNA1509_53176} {RNA1310_2841, RNA1509_12207, RNA1509_19035, RNA1509_53176} {RNA1509_12207, RNA1509_19035, RNA1509_53176, RNA815_6735}
6. MligTC455_01297 70 1.46 Mlig455_042285

Neo: -

Age: -

 0.986 - - 0.986 - - - Mlig455_042285 {REF} {Length: 118} {NoTransDecoderORF}
7. MligTC455_38086 3876 80.76 Mlig455_044474, Mlig455_046754

Neo: -

Age: Up-Down-Up

Region-enriched R1: 3.659/0.00863

 ZNF347 0.984 - - 0.984 - - -

Mlig455_044474 {REF} {Length: 431} {Pfam: C2H2-type zinc finger [PF13894.8, score=25.7]} {RNA1509_7797} {RNA1310_1145} {RNA815_22627}

Mlig455_046754 {REF} {Length: 5818} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=86.8]; C2H2-type zinc finger [PF13894.8, score=73.9]; C2H2-type zinc finger [PF13912.8, score=39.9]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=24.3]} {Human: ENSG00000197937, ZNF347, zinc finger protein 347, [Score=81.3, Expect=8e-15]} {Mouse: ENSMUSG00000034538, Zfp418, zinc finger protein 418, [Score=72.8, Expect=2e-12]; ENSMUSG00000037640, Zfp60, zinc finger protein 60, [Score=70.9, Expect=8e-12]; ENSMUSG00000058883, Zfp708, zinc finger protein 708, [Score=70.5, Expect=8e-12]} {Dmel: FBgn0028647, CG11902, [Score=57.8, Expect=7e-08]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=53.1, Expect=1e-06]} {RNA1509_7797} {RNA1310_1145} {RNA815_319.1}
8. MligTC455_32087 356 7.41 Mlig455_006815, Mlig455_055191

Neo: -

Age: -

 0.979 - - 0.979 - - -

Mlig455_006815 {REF} {Length: 2436} {RNA1509_42275} {RNA1310_5257.1, RNA1509_42275} {RNA1509_42275, RNA815_4711}

Mlig455_055191 {REF} {Length: 2731} {Pfam: Ribosomal protein L11, N-terminal domain [PF03946.16, score=18.8]} {RNA1509_56522, RNA1509_56687} {RNA1310_5257.1, RNA1509_56522, RNA1509_56687} {RNA1509_56522, RNA1509_56687, RNA815_4711}
9. MligTC455_29024 2325 48.43 Mlig455_051078

Neo: Irradiation

Age: Up-Down-Down

 0.975 - - 0.975 - - - Mlig455_051078 {REF} {Length: 906} {RNA1509_5369} {RNA1310_10116.1} {RNA815_54294}
10. MligTC455_18104 454 9.45 Mlig455_039777

Neo: -

Age: -

 SLC35C2 0.974 - - 0.974 - - - Mlig455_039777 {REF} {Length: 2871} {TRANSSPLICED} {Pfam: Triose-phosphate Transporter family [PF03151.18, score=71.9]; UAA transporter family [PF08449.13, score=35.9]; EamA-like transporter family [PF00892.22, score=22.3]} {Human: ENSG00000080189, SLC35C2, solute carrier family 35 member C2, [RH, Score=313, Expect=1e-104]} {Mouse: ENSMUSG00000017664, Slc35c2, solute carrier family 35, member C2, [RH, Score=298, Expect=9e-99]} {Dmel: FBgn0035449, CG14971, [RH, Score=275, Expect=1e-88]} {Celegans: WBGene00021637, Y47G6A.7, [Score=223, Expect=1e-69]} {Smed: dd_Smed_v6_10022_0_1, dd_Smed_v6_10022_0_1, [Score=362, Expect=3e-124]} {RNA1509_11424} {RNA1310_9746, RNA1509_11424} {RNA1509_11424, RNA815_4547}
11. MligTC455_48630 325 6.78 Mlig455_039234

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_039234 {REF} {Length: 1660} {Pfam: TIR domain [PF13676.8, score=55.7]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [Score=63.5, Expect=3e-12]} {RNA1509_25970} {RNA1310_5526} {RNA815_2549.1}
12. MligTC455_22178 202 4.2 Mlig455_025439, Mlig455_025448

Neo: -

Age: Up-Down-Down

Region-enriched R6: 2.965/0.00017

 CREBL2 0.973 - - 0.973 - - -

Mlig455_025439 {REF} {Length: 5491} {Human: ENSG00000111269, CREBL2, cAMP responsive element binding protein like 2, [RH, Score=47.8, Expect=2e-06]} {Mouse: ENSMUSG00000032652, Crebl2, cAMP responsive element binding protein-like 2, [RH, Score=47.8, Expect=2e-06]} {Dmel: FBgn0032202, REPTOR-BP, REPTOR-binding partner, [RH, Score=47.0, Expect=2e-06]} {RNA1509_46406} {RNA1310_60800} {RNA815_57151}

Mlig455_025448 {REF} {Length: 2172} {Human: ENSG00000111269, CREBL2, cAMP responsive element binding protein like 2, [RH, Score=47.8, Expect=2e-06]} {Mouse: ENSMUSG00000032652, Crebl2, cAMP responsive element binding protein-like 2, [RH, Score=47.8, Expect=2e-06]} {Dmel: FBgn0032202, REPTOR-BP, REPTOR-binding partner, [RH, Score=47.8, Expect=1e-06]} {RNA1310_60800} {RNA815_57151}
13. MligTC455_18698 155 3.23 Mlig455_058123

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_058123 {REF} {Length: 975} {Pfam: YlqD protein [PF11068.10, score=18.9]} {RNA1310_7330.2} {RNA815_3574}
14. MligTC455_28297 13349 278.1 Mlig455_062012

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_062012 {REF} {Length: 170} {NoTransDecoderORF}
15. MligTC455_48099 43 0.89 Mlig455_021066

Neo: -

Age: -

 ING4 0.972 - - - - - 0.972 Mlig455_021066 {REF} {Length: 1798} {TRANSSPLICED} {Pfam: Inhibitor of growth proteins N-terminal histone-binding [PF12998.9, score=97.8]; PHD-finger [PF00628.31, score=27.6]} {Human: ENSG00000111653, ING4, inhibitor of growth family member 4, [RH, Score=255, Expect=1e-84]; ENSG00000168395, ING5, inhibitor of growth family member 5, [RH, Score=244, Expect=2e-80]} {Mouse: ENSMUSG00000026283, Ing5, inhibitor of growth family, member 5, [RH, Score=257, Expect=7e-86]} {Dmel: FBgn0032516, Ing5, Inhibitor of growth family member 5, [RH, Score=238, Expect=1e-77]} {Celegans: WBGene00013095, ing-3, Inhibitor of growth protein, [RH, Score=79.3, Expect=2e-16]} {Smed: dd_Smed_v6_7721_0_1, dd_Smed_v6_7721_0_1, [Score=203, Expect=1e-64]} {RNA1509_42044} {RNA1310_33909} {RNA815_36432}
16. MligTC455_19050 594 12.37 Mlig455_009401

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.557

 0.967 - - 0.967 - - - Mlig455_009401 {REF} {Length: 1419} {TRANSSPLICED} {Pfam: NADAR domain [PF08719.13, score=172.3]} {Celegans: WBGene00020747, T24A6.7, [RH, Score=126, Expect=5e-37]} {Smed: dd_Smed_v6_17652_0_1, dd_Smed_v6_17652_0_1, [RH, Score=176, Expect=4e-57]} {RNA1509_18595, RNA1509_28040} {RNA1310_53361.2, RNA1509_18595, RNA1509_28040} {RNA1509_18595, RNA1509_28040, RNA815_30431}
17. MligTC455_19561 531 11.06 Mlig455_039149

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.373

 MRPL39 0.967 - - 0.967 - - - Mlig455_039149 {REF} {Length: 1835} {TRANSSPLICED} {Pfam: TGS domain [PF02824.23, score=33.1]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=19.1]} {Human: ENSG00000154719, MRPL39, mitochondrial ribosomal protein L39, [RH, Score=181, Expect=2e-53]} {Mouse: ENSMUSG00000022889, Mrpl39, mitochondrial ribosomal protein L39, [RH, Score=190, Expect=3e-57]} {Dmel: FBgn0036462, mRpL39, mitochondrial ribosomal protein L39, [RH, Score=195, Expect=5e-59]} {Smed: dd_Smed_v6_7576_0_1, dd_Smed_v6_7576_0_1, [RH, Score=188, Expect=9e-57]} {RNA1509_9497} {RNA1310_16310, RNA1509_9497} {RNA1509_9497, RNA815_7406}
18. MligTC455_22771 181 3.77 Mlig455_004940, Mlig455_019717

Neo: -

Age: -

 0.965 - - 0.965 - - -

Mlig455_004940 {REF} {Length: 1700} {RNA1310_31549} {RNA815_46068}

Mlig455_019717 {REF} {Length: 2555} {RNA1310_28033.1} {RNA815_46068}
19. MligTC455_33284 294 6.13 Mlig455_051124

Neo: Irradiation

Age: logFC(26M/2M)=0.397

 0.964 - - 0.964 - - - Mlig455_051124 {REF} {Length: 5233} {Mouse: ENSMUSG00000031620, Iqcm, IQ motif containing M, [RH, Score=122, Expect=8e-29]} {Celegans: WBGene00018631, F49D11.7, [Score=50.1, Expect=1e-07]} {RNA1509_32167, RNA1509_35916, RNA1509_7353} {RNA1310_961, RNA1509_32167, RNA1509_35916} {RNA1509_32167, RNA1509_35916, RNA815_252.1}
20. MligTC455_48631 371 7.73 Mlig455_039254

Neo: -

Age: -

 0.964 - - 0.964 - - - Mlig455_039254 {REF} {Length: 3810} {Pfam: TIR domain [PF13676.8, score=85.8]; SAM domain (Sterile alpha motif) [PF07647.19, score=27.2]; SAM domain (Sterile alpha motif) [PF00536.32, score=19.6]} {Smed: dd_Smed_v6_12177_0_1, dd_Smed_v6_12177_0_1, [Score=62.4, Expect=6e-10]} {RNA1509_25970} {RNA1310_5526} {RNA815_2549.1}
21. MligTC455_28296 28005 583.44 Mlig455_034885

Neo: -

Age: -

Region-enriched R4: 1.466/0.03430

 0.963 - - 0.963 - - - Mlig455_034885 {REF} {Length: 23} {TRANSSPLICED} {NoTransDecoderORF}
22. MligTC455_28746 352 7.34 Mlig455_013115

Neo: -

Age: -

 ITPR1 0.963 - - 0.963 - - - Mlig455_013115 {REF} {Length: 9824} {Pfam: RIH domain [PF01365.23, score=97.2]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=68.8]; RyR and IP3R Homology associated [PF08454.13, score=66.6]; MIR domain [PF02815.21, score=57.6]; Ion transport protein [PF00520.33, score=17.9]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=229, Expect=5e-59]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=224, Expect=1e-57]; ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=219, Expect=5e-56]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=227, Expect=9e-59]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=160, Expect=2e-38]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=166, Expect=2e-40]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [RH, Score=3031, Expect=0.0]} {RNA1509_25537, RNA1509_2749} {RNA1310_434.1, RNA1509_25537, RNA1509_2749} {RNA1509_25537, RNA1509_2749, RNA815_101}
23. MligTC455_20718 632 13.17 Mlig455_024599

Neo: -

Age: -

 MARCH6 0.962 - - 0.962 - - - Mlig455_024599 {REF} {Length: 3922} {TRANSSPLICED} {Pfam: RING-variant domain [PF12906.9, score=54.3]} {Human: ENSG00000145495, MARCH6, membrane associated ring-CH-type finger 6, [RH, Score=441, Expect=8e-140]} {Mouse: ENSMUSG00000039100, March6, membrane-associated ring finger (C3HC4) 6, [RH, Score=447, Expect=3e-142]} {Dmel: FBgn0035333, CG1317, [RH, Score=171, Expect=2e-43]} {Celegans: WBGene00018847, marc-6, MARCH (Membrane-Associated Ring finger (C3HC4)) homolog, [RH, Score=221, Expect=2e-59]} {Smed: dd_Smed_v6_4584_0_1, dd_Smed_v6_4584_0_1, [RH, Score=374, Expect=7e-115]} {RNA1509_37473, RNA1509_50909, RNA1509_8006} {RNA1310_5490, RNA1509_37473, RNA1509_50909, RNA1509_8006} {RNA1509_37473, RNA1509_50909, RNA1509_8006, RNA815_7121}
24. MligTC455_28048 559 11.64 Mlig455_054717

Neo: -

Age: Down-Up-Down

 0.962 - - 0.962 - - - Mlig455_054717 {REF} {Length: 6438} {Pfam: Syndecan domain [PF01034.22, score=37.3]; SEA domain [PF01390.22, score=32.1]; Thyroglobulin type-1 repeat [PF00086.20, score=18.4]} {Dmel: FBgn0010415, Sdc, Syndecan, [Score=50.8, Expect=9e-07]} {Smed: dd_Smed_v6_14098_0_1, dd_Smed_v6_14098_0_1, [Score=77.0, Expect=2e-15]} {RNA1509_19683} {RNA1310_22787.1} {RNA815_5677.1}
25. MligTC455_46340 259 5.4 Mlig455_049774

Neo: -

Age: -

Region-enriched R1: 5.320/0.00375

 0.962 - - 0.962 - - - Mlig455_049774 {REF} {Length: 1638} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=40.1]; Ankyrin repeats (many copies) [PF13637.8, score=27.8]; Ankyrin repeats (many copies) [PF13857.8, score=24.8]; Ankyrin repeat [PF13606.8, score=19.1]} {Smed: dd_Smed_v6_29956_0_1, dd_Smed_v6_29956_0_1, [RH, Score=75.9, Expect=1e-14]} {RNA1509_39973} {RNA1310_21889} {RNA815_13094}
26. MligTC455_34802 7008 146 Mlig455_012196, Mlig455_028812

Neo: -

Age: -

 0.959 - - 0.959 - - -

Mlig455_012196 {REF} {Length: 856} {Pfam: Lectin C-type domain [PF00059.23, score=21.0]} {RNA1509_20946} {RNA1310_35520} {RNA815_44391}

Mlig455_028812 {REF} {Length: 1269} {Pfam: Lectin C-type domain [PF00059.23, score=21.0]} {RNA1509_20946} {RNA1310_35520} {RNA815_44391}
27. MligTC455_53706 14 0.28 Mlig455_025956

Neo: -

Age: Down-Down-Up

 GTF2F2 0.959 - - - - - 0.959 Mlig455_025956 {REF} {Length: 2660} {TRANSSPLICED} {Pfam: TFIIF, beta subunit HTH domain [PF02270.17, score=79.3]; TFIIF, beta subunit N-terminus [PF17683.3, score=40.0]} {Human: ENSG00000188342, GTF2F2, general transcription factor IIF subunit 2, [RH, Score=176, Expect=5e-53]} {Mouse: ENSMUSG00000067995, Gtf2f2, general transcription factor IIF, polypeptide 2, [RH, Score=174, Expect=1e-52]} {Dmel: FBgn0010421, TfIIFbeta, Transcription factor TFIIFbeta, [RH, Score=164, Expect=3e-48]} {Celegans: WBGene00012694, Y39B6A.36, General transcription factor IIF subunit 2, [RH, Score=130, Expect=1e-35]} {Smed: dd_Smed_v6_2142_0_1, dd_Smed_v6_2142_0_1, [RH, Score=95.1, Expect=1e-22]} {RNA1509_11554} {RNA1310_14522} {RNA815_1242.1}
28. MligTC455_26309 196 4.08 Mlig455_042028

Neo: -

Age: Up-Down-Up

 NAPA 0.958 - - 0.958 - - - Mlig455_042028 {REF} {Length: 1969} {TRANSSPLICED} {Pfam: Soluble NSF attachment protein, SNAP [PF14938.8, score=172.8]; Tetratricopeptide repeat [PF13424.8, score=22.3]} {Human: ENSG00000105402, NAPA, NSF attachment protein alpha, [Score=84.7, Expect=2e-18]} {Dmel: FBgn0250791, alphaSnap, alpha Soluble NSF attachment protein, [Score=59.7, Expect=6e-10]} {Celegans: WBGene00017016, snap-1, SNAP (Soluble NSF Attachment Protein) homolog, [Score=129, Expect=2e-35]} {Smed: dd_Smed_v6_2480_0_1, dd_Smed_v6_2480_0_1, [Score=110, Expect=2e-28]} {RNA1509_25414} {RNA1310_23320} {RNA815_19489}
29. MligTC455_26999 330 6.88 Mlig455_037719, Mlig455_037789

Neo: -

Age: -

 RBM12B 0.958 - - 0.958 - - -

Mlig455_037719 {REF} {Length: 3624} {Pfam: Mitochondrial distribution and morphology protein 10 [PF12519.10, score=19.6]} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=58.9, Expect=4e-08]} {RNA1509_40809} {RNA1310_8203} {RNA815_13132}

Mlig455_037789 {REF} {Length: 3262} {Human: ENSG00000183808, RBM12B, RNA binding motif protein 12B, [Score=61.2, Expect=7e-09]} {RNA1310_8203} {RNA815_13132}
30. MligTC455_43404 387 8.06 Mlig455_018715

Neo: -

Age: Down-Up-Down

 0.958 - - 0.958 - - - Mlig455_018715 {REF} {Length: 2067} {TRANSSPLICED} {RNA1509_11398, RNA1509_39356} {RNA1310_877.1, RNA1509_39356} {RNA1509_39356, RNA815_21988}
31. MligTC455_51504 792 16.5 Mlig455_030064

Neo: -

Age: -

 DTX3 0.957 - - 0.957 - - - Mlig455_030064 {REF} {Length: 1763} {Pfam: Deltex C-terminal domain [PF18102.3, score=137.3]} {Human: ENSG00000178498, DTX3, deltex E3 ubiquitin ligase 3, [Score=130, Expect=4e-34]; ENSG00000163840, DTX3L, deltex E3 ubiquitin ligase 3L, [Score=128, Expect=6e-32]} {Mouse: ENSMUSG00000040415, Dtx3, deltex 3, E3 ubiquitin ligase, [Score=131, Expect=7e-35]; ENSMUSG00000049502, Dtx3l, deltex 3-like, E3 ubiquitin ligase, [Score=125, Expect=5e-31]} {Dmel: FBgn0000524, dx, deltex, [Score=85.1, Expect=1e-17]} {RNA1509_43676, RNA1509_5594} {RNA1310_5119.1, RNA1509_43676} {RNA1509_43676, RNA815_4008}
32. MligTC455_50507 306 6.36 Mlig455_067810

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_067810 {REF} {Length: 2147} {Smed: dd_Smed_v6_9825_0_1, dd_Smed_v6_9825_0_1, [Score=47.4, Expect=1e-05]} {RNA1509_31617} {RNA1310_16888} {RNA815_27763}
33. MligTC455_54298 484 10.08 Mlig455_036433, Mlig455_054604

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.319

 0.955 - - 0.955 - - -

Mlig455_036433 {REF} {Length: 2616} {Pfam: Leucine rich repeat [PF13855.8, score=44.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.7]} {Mouse: ENSMUSG00000042793, Lgr6, leucine-rich repeat-containing G protein-coupled receptor 6, [Score=50.1, Expect=7e-06]} {RNA1509_11297} {RNA1310_8241} {RNA815_10557}

Mlig455_054604 {REF} {Length: 2612} {Pfam: Leucine rich repeat [PF13855.8, score=45.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=22.2]} {Mouse: ENSMUSG00000042793, Lgr6, leucine-rich repeat-containing G protein-coupled receptor 6, [Score=51.2, Expect=3e-06]} {Dmel: FBgn0015400, kek2, kekkon-2, [Score=50.4, Expect=4e-06]} {RNA1509_11297} {RNA1310_8241, RNA1509_11297} {RNA1509_11297, RNA815_10557}
34. MligTC455_47886 409 8.53 Mlig455_052268, Mlig455_052359

Neo: -

Age: Up-Down-Down

 0.954 - - 0.954 - - -

Mlig455_052268 {REF} {Length: 3338} {RNA1509_40745} {RNA1310_7619} {RNA815_36192}

Mlig455_052359 {REF} {Length: 5246} {RNA1509_40745} {RNA1310_7619, RNA1509_40745} {RNA1509_40745, RNA815_36192}
35. MligTC455_15027 18 0.37 Mlig455_044364

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_044364 {REF} {Length: 1060} {NoTransDecoderORF} {RNA1310_105534.1}
36. MligTC455_28295 471 9.82 Mlig455_034661

Neo: -

Age: -

 0.95 - - 0.950 - - - Mlig455_034661 {REF} {Length: 526} {RNA1310_61099} {RNA815_29618}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA