TomoSeq data search

Data search

Results for MligTC455_25730

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25730

27

0.57

Mlig455_000466

Neo: -

Age: -

GATA3

Mlig455_000466 {REF} {Length: 2970} {Pfam: GATA zinc finger [PF00320.29, score=94.1]} {Human: ENSG00000107485, GATA3, GATA binding protein 3, [RH, Score=211, Expect=2e-61]; ENSG00000179348, GATA2, GATA binding protein 2, [RH, Score=209, Expect=2e-60]; ENSG00000136574, GATA4, GATA binding protein 4, [RH, Score=202, Expect=3e-58]; ENSG00000285109, GATA4, GATA binding protein 4, [RH, Score=202, Expect=3e-58]} {Mouse: ENSMUSG00000015619, Gata3, GATA binding protein 3, [RH, Score=211, Expect=1e-61]; ENSMUSG00000015053, Gata2, GATA binding protein 2, [RH, Score=209, Expect=1e-60]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [RH, Score=204, Expect=5e-59]} {Dmel: FBgn0001138, grn, grain, [RH, Score=214, Expect=1e-60]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [RH, Score=202, Expect=7e-58]} {Smed: dd_Smed_v6_8208_0_1, dd_Smed_v6_8208_0_1, [RH, Score=218, Expect=9e-65]} {RNA1509_14139} {RNA1310_42126} {RNA815_46985}

Cumulative graph for MligTC455_25730

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.031	0.899	1.00000	1.00000
RegionR2	1.993	0.899	0.42282	0.81345
RegionR3	-0.993	0.899	0.99656	1.00000
RegionR4	0.467	0.899	0.62674	0.93575
RegionR5	-0.881	0.899	0.98491	1.00000
RegionR6	-0.282	0.899	0.85255	1.00000
RegionR7	-0.825	0.899	0.99976	1.00000
RegionR8	0.49	0.899	0.84211	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.98	0.899	0.72275	1.00000
RegenerationR2	1.064	0.899	0.55310	0.89500
RegenerationR3	3.312	0.899	0.19012	0.62532
RegenerationR4	1.521	0.899	0.48553	0.86162
RegenerationR5	2.406	0.899	0.22816	0.66239
RegenerationR6	1.251	0.899	0.64362	0.89506
RegenerationBL	2.197	0.899	0.40572	0.77494
RegenerationTP	2.107	0.899	0.49507	0.89797

Genes with expression patterns similar to MligTC455_25730

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25730	27	0.57	Mlig455_000466	Neo: - Age: -	GATA3	3	-	-	1.000	-	1.000	1.000	Mlig455_000466 {REF} {Length: 2970} {Pfam: GATA zinc finger [PF00320.29, score=94.1]} {Human: ENSG00000107485, GATA3, GATA binding protein 3, [RH, Score=211, Expect=2e-61]; ENSG00000179348, GATA2, GATA binding protein 2, [RH, Score=209, Expect=2e-60]; ENSG00000136574, GATA4, GATA binding protein 4, [RH, Score=202, Expect=3e-58]; ENSG00000285109, GATA4, GATA binding protein 4, [RH, Score=202, Expect=3e-58]} {Mouse: ENSMUSG00000015619, Gata3, GATA binding protein 3, [RH, Score=211, Expect=1e-61]; ENSMUSG00000015053, Gata2, GATA binding protein 2, [RH, Score=209, Expect=1e-60]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [RH, Score=204, Expect=5e-59]} {Dmel: FBgn0001138, grn, grain, [RH, Score=214, Expect=1e-60]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [RH, Score=202, Expect=7e-58]} {Smed: dd_Smed_v6_8208_0_1, dd_Smed_v6_8208_0_1, [RH, Score=218, Expect=9e-65]} {RNA1509_14139} {RNA1310_42126} {RNA815_46985}
2.	MligTC455_40834	509	10.61	Mlig455_067713	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.796		1.817	-	-	0.867	-	-	0.950	Mlig455_067713 {REF} {Length: 1423} {Smed: dd_Smed_v6_10173_0_1, dd_Smed_v6_10173_0_1, [Score=49.3, Expect=5e-07]} {RNA1509_23138} {RNA1310_23456.1} {RNA815_37333}
3.	MligTC455_40948	197	4.1	Mlig455_058426	Neo: - Age: -	FSIP1	0.969	-	-	0.969	-	-	-	Mlig455_058426 {REF} {Length: 3265} {TRANSSPLICED} {Pfam: FSIP1 family [PF15554.8, score=169.0]} {Human: ENSG00000150667, FSIP1, fibrous sheath interacting protein 1, [RH, Score=105, Expect=4e-23]} {Mouse: ENSMUSG00000027344, Fsip1, fibrous sheath-interacting protein 1, [Score=96.3, Expect=2e-20]} {Smed: dd_Smed_v6_16017_0_1, dd_Smed_v6_16017_0_1, [RH, Score=122, Expect=2e-29]} {RNA1509_20339} {RNA1310_6204.1} {RNA815_13781}
4.	MligTC455_37414	739	15.39	Mlig455_056489	Neo: - Age: Up-Down-Up Region-enriched R4: 1.544/0.03051		0.962	-	-	-	-	-	0.962	Mlig455_056489 {REF} {Length: 4065} {Smed: dd_Smed_v6_8765_0_1, dd_Smed_v6_8765_0_1, [RH, Score=59.3, Expect=5e-10]} {RNA1509_20341} {RNA1310_15756.1} {RNA815_34876}
5.	MligTC455_51596	719	14.98	Mlig455_014910	Neo: - Age: - Region-enriched R7: 2.054/0.02070		0.956	-	-	-	-	0.956	-	Mlig455_014910 {REF} {Length: 3079} {Pfam: Major Facilitator Superfamily [PF07690.18, score=29.8]} {Dmel: FBgn0033028, CG11665, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=471, Expect=1e-164]} {RNA1509_10248} {RNA1310_28488} {RNA815_13739}
6.	MligTC455_37352	210	4.37	Mlig455_012059	Neo: Int S/G2/M Age: -	RNASEH2A	0.955	-	-	-	-	-	0.955	Mlig455_012059 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: Ribonuclease HII [PF01351.20, score=153.5]} {Human: ENSG00000104889, RNASEH2A, ribonuclease H2 subunit A, [RH, Score=232, Expect=4e-74]} {Mouse: ENSMUSG00000052926, Rnaseh2a, ribonuclease H2, large subunit, [RH, Score=234, Expect=5e-75]} {Dmel: FBgn0031252, CG13690, [RH, Score=226, Expect=1e-71]} {Celegans: WBGene00004383, rnh-2, Ribonuclease H2 subunit A, [RH, Score=231, Expect=3e-74]} {Smed: dd_Smed_v6_10404_0_1, dd_Smed_v6_10404_0_1, [RH, Score=261, Expect=8e-86]} {RNA1509_29004} {RNA1310_30632} {RNA815_10850}
7.	MligTC455_41243	2079	43.3	Mlig455_045879	Neo: - Age: Down-Down-Up		0.954	-	-	-	-	-	0.954	Mlig455_045879 {REF} {Length: 1840} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=43.7]; PPPDE putative peptidase domain [PF05903.16, score=19.9]} {RNA1509_18091, RNA1509_42801, RNA1509_43636, RNA1509_8578} {RNA1310_14958, RNA1509_18091, RNA1509_42801, RNA1509_43636, RNA1509_8578} {RNA1509_18091, RNA1509_42801, RNA1509_43636, RNA1509_8578, RNA815_6637.1}
8.	MligTC455_35227	526	10.95	Mlig455_046602	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.369		0.951	-	-	-	-	-	0.951	Mlig455_046602 {REF} {Length: 5225} {Pfam: SEA domain [PF01390.22, score=33.0]} {Mouse: ENSMUSG00000073490, Ifi207, interferon activated gene 207, [Score=62.0, Expect=6e-09]} {Dmel: FBgn0053265, Muc68E, Mucin 68E, [Score=73.6, Expect=2e-12]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=52.0, Expect=4e-06]} {RNA1509_58226} {RNA1310_6940.1} {RNA815_3893.1}
9.	MligTC455_53293	76	1.59	Mlig455_029351	Neo: - Age: Up-Down-Up	STK33	0.95	-	-	-	-	-	0.950	Mlig455_029351 {REF} {Length: 1597} {Pfam: Protein kinase domain [PF00069.27, score=209.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.2]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.3]; RIO1 family [PF01163.24, score=19.0]} {Human: ENSG00000130413, STK33, serine/threonine kinase 33, [RH, Score=187, Expect=3e-54]} {Mouse: ENSMUSG00000031027, Stk33, serine/threonine kinase 33, [Score=189, Expect=3e-55]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=140, Expect=9e-38]} {Celegans: WBGene00009326, F32D8.1, [Score=140, Expect=3e-38]} {Smed: dd_Smed_v6_12461_0_1, dd_Smed_v6_12461_0_1, [RH, Score=219, Expect=1e-68]} {RNA1310_19666.1} {RNA815_13479}

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