Data search


search
Exact
Search

Results for MligTC455_51596

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_51596 719 14.98 Mlig455_014910

Neo: -

Age: -

Region-enriched R7: 2.054/0.02070

Mlig455_014910 {REF} {Length: 3079} {Pfam: Major Facilitator Superfamily [PF07690.18, score=29.8]} {Dmel: FBgn0033028, CG11665, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=471, Expect=1e-164]} {RNA1509_10248} {RNA1310_28488} {RNA815_13739}

Cumulative graph for MligTC455_51596

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.364 4.044 0.01748 0.36850
RegionR2 -0.383 4.044 0.93876 1.00000
RegionR3 0.888 4.044 0.22866 0.76942
RegionR4 1.505 4.044 0.04191 0.17097
RegionR5 -0.12 4.044 0.88591 1.00000
RegionR6 1.264 4.044 0.04977 0.41777
RegionR7 2.054 4.044 0.00051 0.02070
RegionR8 2.155 4.044 0.00218 0.07944

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 7.034 4.044 0.06380 0.73912
RegenerationR2 0.437 4.044 0.26331 0.70977
RegenerationR3 -0.137 4.044 0.73613 0.95944
RegenerationR4 -0.667 4.044 0.14114 0.56372
RegenerationR5 0.121 4.044 0.78098 0.98210
RegenerationR6 -1.094 4.044 0.01218 0.13566
RegenerationBL -0.753 4.044 0.08204 0.33505
RegenerationTP -0.652 4.044 0.14990 0.57384


Genes with expression patterns similar to MligTC455_51596

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_51596 719 14.98 Mlig455_014910

Neo: -

Age: -

Region-enriched R7: 2.054/0.02070

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_014910 {REF} {Length: 3079} {Pfam: Major Facilitator Superfamily [PF07690.18, score=29.8]} {Dmel: FBgn0033028, CG11665, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_1284_0_1, dd_Smed_v6_1284_0_1, [Score=471, Expect=1e-164]} {RNA1509_10248} {RNA1310_28488} {RNA815_13739}
2. MligTC455_43740 6345 132.19 Mlig455_050446

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.443

Region-enriched R8: 1.096/0.00660

DYNLL2 1.672 - - 0.710 0.962 - - Mlig455_050446 {REF} {Length: 1186} {Pfam: Dynein light chain type 1 [PF01221.20, score=73.8]; EF hand [PF13202.8, score=40.2]; EF-hand domain pair [PF13499.8, score=39.8]; EF hand [PF00036.34, score=36.4]; EF-hand domain [PF13405.8, score=34.0]; EF-hand domain pair [PF13833.8, score=21.2]} {Human: ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=63.9, Expect=2e-13]} {Mouse: ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=63.9, Expect=2e-13]} {Dmel: FBgn0011760, ctp, cut up, [Score=60.8, Expect=1e-12]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=60.8, Expect=1e-12]} {Smed: dd_Smed_v6_17388_0_1, dd_Smed_v6_17388_0_1, [Score=155, Expect=2e-48]} {RNA1509_18535, RNA1509_27354, RNA1509_43136, RNA1509_49418, RNA1509_8589} {RNA1310_29572, RNA1509_18535, RNA1509_27354, RNA1509_43136, RNA1509_49418, RNA1509_8589} {RNA1509_18535, RNA1509_27354, RNA1509_43136, RNA1509_49418, RNA1509_8589, RNA815_13017}
3. MligTC455_51384 557 11.61 Mlig455_025859, Mlig455_025921, Mlig455_025953

Neo: -

Age: logFC(26M/2M)=-0.224

0.957 - - - 0.957 - -

Mlig455_025859 {REF} {Length: 3521} {Pfam: Dynamin family [PF00350.25, score=44.1]; 50S ribosome-binding GTPase [PF01926.25, score=38.9]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.5]; ATPase domain predominantly from Archaea [PF01637.20, score=21.4]; RsgA GTPase [PF03193.18, score=19.5]} {Smed: dd_Smed_v6_6544_0_1, dd_Smed_v6_6544_0_1, [Score=69.3, Expect=9e-12]} {RNA1509_11576} {RNA1310_3511} {RNA815_1113}

Mlig455_025921 {REF} {Length: 3198} {Pfam: Dynamin family [PF00350.25, score=44.4]; 50S ribosome-binding GTPase [PF01926.25, score=39.1]; Elongation factor Tu GTP binding domain [PF00009.29, score=28.7]; ATPase domain predominantly from Archaea [PF01637.20, score=21.5]; RsgA GTPase [PF03193.18, score=19.9]} {Smed: dd_Smed_v6_6544_0_1, dd_Smed_v6_6544_0_1, [Score=68.9, Expect=8e-12]} {RNA1509_58217, RNA1509_59966} {RNA1310_3511, RNA1509_59966} {RNA1509_59966, RNA815_1113}

Mlig455_025953 {REF} {Length: 3561} {Pfam: Dynamin family [PF00350.25, score=44.1]; 50S ribosome-binding GTPase [PF01926.25, score=39.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=29.0]; RsgA GTPase [PF03193.18, score=20.4]; ATPase domain predominantly from Archaea [PF01637.20, score=19.8]} {Smed: dd_Smed_v6_6544_0_1, dd_Smed_v6_6544_0_1, [Score=69.3, Expect=9e-12]} {RNA1509_11576, RNA1509_43753} {RNA1310_3511, RNA1509_43753} {RNA1509_43753, RNA815_1113}
4. MligTC455_25730 27 0.57 Mlig455_000466

Neo: -

Age: -

GATA3 0.956 - - - - 0.956 - Mlig455_000466 {REF} {Length: 2970} {Pfam: GATA zinc finger [PF00320.29, score=94.1]} {Human: ENSG00000107485, GATA3, GATA binding protein 3, [RH, Score=211, Expect=2e-61]; ENSG00000179348, GATA2, GATA binding protein 2, [RH, Score=209, Expect=2e-60]; ENSG00000136574, GATA4, GATA binding protein 4, [RH, Score=202, Expect=3e-58]; ENSG00000285109, GATA4, GATA binding protein 4, [RH, Score=202, Expect=3e-58]} {Mouse: ENSMUSG00000015619, Gata3, GATA binding protein 3, [RH, Score=211, Expect=1e-61]; ENSMUSG00000015053, Gata2, GATA binding protein 2, [RH, Score=209, Expect=1e-60]; ENSMUSG00000021944, Gata4, GATA binding protein 4, [RH, Score=204, Expect=5e-59]} {Dmel: FBgn0001138, grn, grain, [RH, Score=214, Expect=1e-60]} {Celegans: WBGene00001249, elt-1, Transcription factor elt-1, [RH, Score=202, Expect=7e-58]} {Smed: dd_Smed_v6_8208_0_1, dd_Smed_v6_8208_0_1, [RH, Score=218, Expect=9e-65]} {RNA1509_14139} {RNA1310_42126} {RNA815_46985}
5. MligTC455_42585 1184 24.66 Mlig455_042618, Mlig455_042653

Neo: -

Age: Up-Down-Down

Region-enriched R4: 1.335/0.04456

0.95 - - - 0.950 - -

Mlig455_042618 {REF} {Length: 5242} {TRANSSPLICED} {RNA1509_27176, RNA1509_50344} {RNA1310_20034, RNA1509_27176, RNA1509_50344} {RNA1509_27176, RNA1509_50344, RNA815_23056}

Mlig455_042653 {REF} {Length: 5047} {TRANSSPLICED} {RNA1509_27176, RNA1509_32638} {RNA1310_20034, RNA1509_32638} {RNA1509_32638, RNA815_23056}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA