TomoSeq data search

Data search

Results for MligTC455_25733

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_25733	284	5.92	Mlig455_046183	Neo: - Age: Down-Up-Down	UBE2H	Mlig455_046183 {REF} {Length: 3803} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=123.4]} {Human: ENSG00000186591, UBE2H, ubiquitin conjugating enzyme E2 H, [RH, Score=300, Expect=2e-104]} {Mouse: ENSMUSG00000039159, Ube2h, ubiquitin-conjugating enzyme E2H, [RH, Score=300, Expect=1e-104]} {Dmel: FBgn0029996, UbcE2H, Ubiquitin conjugating enzyme E2H, [RH, Score=272, Expect=1e-93]} {Celegans: WBGene00006705, ubc-8, UBiquitin Conjugating enzyme, [RH, Score=249, Expect=4e-84]} {Smed: dd_Smed_v6_4514_0_1, dd_Smed_v6_4514_0_1, [RH, Score=267, Expect=9e-92]} {RNA1509_28957, RNA1509_40439} {RNA1310_30434.2, RNA1509_28957, RNA1509_40439} {RNA1509_28957, RNA1509_40439, RNA815_15106.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_25733

284

5.92

Mlig455_046183

Neo: -

Age: Down-Up-Down

UBE2H

Mlig455_046183 {REF} {Length: 3803} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=123.4]} {Human: ENSG00000186591, UBE2H, ubiquitin conjugating enzyme E2 H, [RH, Score=300, Expect=2e-104]} {Mouse: ENSMUSG00000039159, Ube2h, ubiquitin-conjugating enzyme E2H, [RH, Score=300, Expect=1e-104]} {Dmel: FBgn0029996, UbcE2H, Ubiquitin conjugating enzyme E2H, [RH, Score=272, Expect=1e-93]} {Celegans: WBGene00006705, ubc-8, UBiquitin Conjugating enzyme, [RH, Score=249, Expect=4e-84]} {Smed: dd_Smed_v6_4514_0_1, dd_Smed_v6_4514_0_1, [RH, Score=267, Expect=9e-92]} {RNA1509_28957, RNA1509_40439} {RNA1310_30434.2, RNA1509_28957, RNA1509_40439} {RNA1509_28957, RNA1509_40439, RNA815_15106.1}

Cumulative graph for MligTC455_25733

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.803	3.159	0.16931	0.79407
RegionR2	1.053	3.159	0.26538	0.64750
RegionR3	1.467	3.159	0.04257	0.36001
RegionR4	1.185	3.159	0.18371	0.45537
RegionR5	1.282	3.159	0.07173	0.24235
RegionR6	0.959	3.159	0.25940	0.84716
RegionR7	-0.908	3.159	0.98410	1.00000
RegionR8	0.765	3.159	0.50895	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.534	3.159	0.46512	1.00000
RegenerationR2	0.535	3.159	0.24752	0.69488
RegenerationR3	-0.224	3.159	0.67111	0.93740
RegenerationR4	0.416	3.159	0.45503	0.84450
RegenerationR5	0.04	3.159	0.93044	1.00000
RegenerationR6	-0.021	3.159	0.96929	1.00000
RegenerationBL	-0.857	3.159	0.40981	0.77894
RegenerationTP	0.867	3.159	0.31114	0.75566

Genes with expression patterns similar to MligTC455_25733

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_25733	284	5.92	Mlig455_046183	Neo: - Age: Down-Up-Down	UBE2H	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046183 {REF} {Length: 3803} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=123.4]} {Human: ENSG00000186591, UBE2H, ubiquitin conjugating enzyme E2 H, [RH, Score=300, Expect=2e-104]} {Mouse: ENSMUSG00000039159, Ube2h, ubiquitin-conjugating enzyme E2H, [RH, Score=300, Expect=1e-104]} {Dmel: FBgn0029996, UbcE2H, Ubiquitin conjugating enzyme E2H, [RH, Score=272, Expect=1e-93]} {Celegans: WBGene00006705, ubc-8, UBiquitin Conjugating enzyme, [RH, Score=249, Expect=4e-84]} {Smed: dd_Smed_v6_4514_0_1, dd_Smed_v6_4514_0_1, [RH, Score=267, Expect=9e-92]} {RNA1509_28957, RNA1509_40439} {RNA1310_30434.2, RNA1509_28957, RNA1509_40439} {RNA1509_28957, RNA1509_40439, RNA815_15106.1}
2.	MligTC455_05885	516	10.76	Mlig455_011335	Neo: - Age: logFC(26M/2M)=-0.395	MAP3K19	0.969	-	-	-	0.969	-	-	Mlig455_011335 {REF} {Length: 6983} {Pfam: Protein kinase domain [PF00069.27, score=287.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=180.9]; Ankyrin repeats (many copies) [PF13637.8, score=56.3]; Ankyrin repeats (3 copies) [PF12796.9, score=55.0]; Apolipoprotein L [PF05461.13, score=39.2]; Ankyrin repeat [PF13606.8, score=37.3]; Ankyrin repeats (many copies) [PF13857.8, score=32.7]; Ankyrin repeat [PF00023.32, score=31.2]; Phosphotransferase enzyme family [PF01636.25, score=21.2]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=118, Expect=4e-27]; ENSG00000163482, STK36, serine/threonine kinase 36, [Score=114, Expect=6e-25]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=115, Expect=4e-26]; ENSMUSG00000033276, Stk36, serine/threonine kinase 36, [Score=113, Expect=1e-24]; ENSMUSG00000020389, Cdkl3, cyclin-dependent kinase-like 3, [Score=112, Expect=7e-25]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=104, Expect=4e-22]} {Celegans: WBGene00019801, aak-1, 5'-AMP-activated protein kinase catalytic subunit alpha-1, [Score=97.1, Expect=2e-20]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=108, Expect=1e-23]} {RNA1509_1087, RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761} {RNA1310_1574, RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761} {RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761, RNA815_525.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_25733

284

5.92

Mlig455_046183

Neo: -

Age: Down-Up-Down

UBE2H

1.000

MligTC455_05885

516

10.76

Mlig455_011335

Neo: -

Age: logFC(26M/2M)=-0.395

MAP3K19

0.969

Mlig455_011335 {REF} {Length: 6983} {Pfam: Protein kinase domain [PF00069.27, score=287.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=180.9]; Ankyrin repeats (many copies) [PF13637.8, score=56.3]; Ankyrin repeats (3 copies) [PF12796.9, score=55.0]; Apolipoprotein L [PF05461.13, score=39.2]; Ankyrin repeat [PF13606.8, score=37.3]; Ankyrin repeats (many copies) [PF13857.8, score=32.7]; Ankyrin repeat [PF00023.32, score=31.2]; Phosphotransferase enzyme family [PF01636.25, score=21.2]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=118, Expect=4e-27]; ENSG00000163482, STK36, serine/threonine kinase 36, [Score=114, Expect=6e-25]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=115, Expect=4e-26]; ENSMUSG00000033276, Stk36, serine/threonine kinase 36, [Score=113, Expect=1e-24]; ENSMUSG00000020389, Cdkl3, cyclin-dependent kinase-like 3, [Score=112, Expect=7e-25]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=104, Expect=4e-22]} {Celegans: WBGene00019801, aak-1, 5'-AMP-activated protein kinase catalytic subunit alpha-1, [Score=97.1, Expect=2e-20]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=108, Expect=1e-23]} {RNA1509_1087, RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761} {RNA1310_1574, RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761} {RNA1509_13350, RNA1509_21157, RNA1509_56155, RNA1509_58761, RNA815_525.1}