M. lignano Tomo-Seq
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Results for MligTC455_25793

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25793 109 2.26 Mlig455_051834

Neo: -

Age: -

 Mlig455_051834 {REF} {Length: 928} {RNA1509_22707} {RNA1310_61401.2} {RNA815_24119.1}

Cumulative graph for MligTC455_25793

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.717 1.84 0.20200 0.83964
RegionR2 1.345 1.84 0.22389 0.59411
RegionR3 1.471 1.84 0.09044 0.53117
RegionR4 -0.232 1.84 0.91587 1.00000
RegionR5 -0.832 1.84 0.98177 1.00000
RegionR6 0.062 1.84 0.83679 1.00000
RegionR7 2.291 1.84 0.01289 0.20095
RegionR8 1.612 1.84 0.18412 0.77083

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.406 1.84 0.99991 1.00000
RegenerationR2 -0.173 1.84 0.81848 0.99476
RegenerationR3 -0.417 1.84 0.60804 0.91180
RegenerationR4 0.256 1.84 0.78809 0.98330
RegenerationR5 0.303 1.84 0.76884 0.97855
RegenerationR6 0.504 1.84 0.60592 0.87166
RegenerationBL -0.68 1.84 0.52788 0.88834
RegenerationTP -1.103 1.84 0.28909 0.73463


Genes with expression patterns similar to MligTC455_25793

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25793 109 2.26 Mlig455_051834

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_051834 {REF} {Length: 928} {RNA1509_22707} {RNA1310_61401.2} {RNA815_24119.1}
2. MligTC455_25792 1420 29.58 Mlig455_016342, Mlig455_020876, Mlig455_036482, Mlig455_060659, Mlig455_068395

Neo: -

Age: -

Region-enriched R7: 1.712/0.01745

 1.814 0.976 0.838 - - - -

Mlig455_016342 {REF} {Length: 850} {RNA1509_22707} {RNA1310_33596.1} {RNA815_24119.1}

Mlig455_020876 {REF} {Length: 1066} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1}

Mlig455_036482 {REF} {Length: 786} {RNA1509_22707} {RNA1310_15800} {RNA815_24119.1}

Mlig455_060659 {REF} {Length: 1236} {RNA1509_22707} {RNA1310_33252.1} {RNA815_24119.1}

Mlig455_068395 {REF} {Length: 354} {NoTransDecoderORF} {RNA1509_22707} {RNA1310_90313} {RNA815_24119.1}
3. MligTC455_29106 442 9.2 Mlig455_064655

Neo: -

Age: Up-Down-Down

Region-specific R7: 3.413

Region-enriched R7: 3.335/0.00000
Region-enriched R2: 2.018/0.01230

Regeneration-downregulated BL: -6.699

Regeneration-depleted BL: -6.699

 FNDC3A 1.715 - - 0.756 - 0.959 - Mlig455_064655 {REF} {Length: 4196} {Pfam: Fibronectin type III domain [PF00041.23, score=113.8]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=40.4]; SusE outer membrane protein [PF14292.8, score=22.6]; Fibronectin-III type domain [PF16794.7, score=18.7]} {Human: ENSG00000102531, FNDC3A, fibronectin type III domain containing 3A, [Score=154, Expect=4e-40]; ENSG00000075420, FNDC3B, fibronectin type III domain containing 3B, [Score=147, Expect=5e-38]} {Mouse: ENSMUSG00000033487, Fndc3a, fibronectin type III domain containing 3A, [Score=151, Expect=2e-39]} {Dmel: FBgn0259735, CG42389, [Score=99.8, Expect=4e-22]} {Celegans: WBGene00006776, unc-40, Unc-40 protein, [Score=63.9, Expect=1e-10]} {Smed: dd_Smed_v6_4612_0_2, dd_Smed_v6_4612_0_2, [Score=140, Expect=8e-36]} {RNA1509_7286} {RNA1310_921.1} {RNA815_21055}
4. MligTC455_46054 113 2.34 Mlig455_047566

Neo: -

Age: -

 1.656 - 0.702 0.954 - - - Mlig455_047566 {REF} {Length: 3957} {RNA1509_22963} {RNA1310_2801, RNA1509_22963} {RNA1509_22963, RNA815_21724}
5. MligTC455_17192 43 0.89 Mlig455_060323

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_060323 {REF} {Length: 504} {NoTransDecoderORF} {RNA1310_129337}

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