Data search
Results for MligTC455_25882
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25882 | 569 | 11.86 | Mlig455_005912 | Neo: - Age: Down-Up-Down Region-enriched R3: 1.871/0.02278 |
NCALD | Mlig455_005912 {REF} {Length: 1243} {Pfam: Leucine rich repeat [PF13855.8, score=90.9]; EF-hand domain pair [PF13499.8, score=77.3]; EF hand [PF00036.34, score=73.6]; EF-hand domain [PF13405.8, score=62.8]; EF hand [PF13202.8, score=58.4]; EF-hand domain pair [PF13833.8, score=52.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=43.1]; Leucine-rich repeat [PF14580.8, score=27.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=19.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=18.6]} {Human: ENSG00000104490, NCALD, neurocalcin delta, [Score=201, Expect=8e-61]; ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=191, Expect=6e-57]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=201, Expect=6e-61]} {Dmel: FBgn0036926, CG7646, [RH, Score=229, Expect=1e-71]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [RH, Score=252, Expect=9e-81]} {Smed: dd_Smed_v6_6534_0_2, dd_Smed_v6_6534_0_2, [RH, Score=369, Expect=4e-126]} {RNA1509_48802} {RNA1310_30544.1, RNA1509_48802} {RNA1509_48802, RNA815_13223.1} |
Cumulative graph for MligTC455_25882
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.64 | 3.909 | 0.01082 | 0.30373 | |
| RegionR2 | 1.521 | 3.909 | 0.03143 | 0.20092 | |
| RegionR3 | 1.871 | 3.909 | 0.00070 | 0.02278 | |
| RegionR4 | 0.701 | 3.909 | 0.39969 | 0.72603 | |
| RegionR5 | 0.587 | 3.909 | 0.48504 | 0.84875 | |
| RegionR6 | 1.299 | 3.909 | 0.05794 | 0.45081 | |
| RegionR7 | 1.086 | 3.909 | 0.20557 | 0.81608 | |
| RegionR8 | 0.575 | 3.909 | 0.58712 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.375 | 3.909 | 0.99997 | 1.00000 | |
| RegenerationR2 | -0.272 | 3.909 | 0.41048 | 0.82048 | |
| RegenerationR3 | -0.057 | 3.909 | 0.87093 | 1.00000 | |
| RegenerationR4 | 0.388 | 3.909 | 0.31918 | 0.75743 | |
| RegenerationR5 | 0.392 | 3.909 | 0.29455 | 0.72222 | |
| RegenerationR6 | -0.064 | 3.909 | 0.87427 | 1.00000 | |
| RegenerationBL | -0.151 | 3.909 | 0.77219 | 1.00000 | |
| RegenerationTP | 0.792 | 3.909 | 0.13908 | 0.55683 |
Genes with expression patterns similar to MligTC455_25882
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25882 | 569 | 11.86 | Mlig455_005912 | Neo: - Age: Down-Up-Down Region-enriched R3: 1.871/0.02278 |
NCALD | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005912 {REF} {Length: 1243} {Pfam: Leucine rich repeat [PF13855.8, score=90.9]; EF-hand domain pair [PF13499.8, score=77.3]; EF hand [PF00036.34, score=73.6]; EF-hand domain [PF13405.8, score=62.8]; EF hand [PF13202.8, score=58.4]; EF-hand domain pair [PF13833.8, score=52.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=43.1]; Leucine-rich repeat [PF14580.8, score=27.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=19.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=18.6]} {Human: ENSG00000104490, NCALD, neurocalcin delta, [Score=201, Expect=8e-61]; ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=191, Expect=6e-57]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=201, Expect=6e-61]} {Dmel: FBgn0036926, CG7646, [RH, Score=229, Expect=1e-71]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [RH, Score=252, Expect=9e-81]} {Smed: dd_Smed_v6_6534_0_2, dd_Smed_v6_6534_0_2, [RH, Score=369, Expect=4e-126]} {RNA1509_48802} {RNA1310_30544.1, RNA1509_48802} {RNA1509_48802, RNA815_13223.1} |
| 2. | MligTC455_25884 | 480 | 9.99 | Mlig455_028576 | Neo: - Age: - Region-enriched R3: 2.087/0.01066 |
NCALD | 3.574 | - | 0.765 | 0.919 | 0.922 | - | 0.968 | Mlig455_028576 {REF} {Length: 1180} {Pfam: EF-hand domain pair [PF13499.8, score=82.7]; EF hand [PF00036.34, score=76.4]; EF-hand domain [PF13405.8, score=68.4]; EF hand [PF13202.8, score=63.8]; EF-hand domain pair [PF13833.8, score=58.3]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=23.8]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=23.4]} {Human: ENSG00000104490, NCALD, neurocalcin delta, [Score=201, Expect=1e-65]; ENSG00000115756, HPCAL1, hippocalcin like 1, [Score=191, Expect=1e-61]} {Mouse: ENSMUSG00000051359, Ncald, neurocalcin delta, [Score=201, Expect=1e-65]} {Dmel: FBgn0036926, CG7646, [RH, Score=221, Expect=7e-74]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [RH, Score=242, Expect=4e-82]} {Smed: dd_Smed_v6_6534_0_2, dd_Smed_v6_6534_0_2, [RH, Score=357, Expect=1e-127]} {RNA1509_48802} {RNA1310_30544.1} {RNA815_13223.1} |
| 3. | MligTC455_34153 | 255 | 5.31 | Mlig455_064393 | Neo: - Age: - |
AC243734.1 | 3.192 | - | 0.713 | 0.784 | 0.962 | - | 0.733 | Mlig455_064393 {REF} {Length: 3620} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=205.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=179.0]} {Human: ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [RH, Score=417, Expect=9e-141]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [RH, Score=417, Expect=9e-141]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [RH, Score=414, Expect=2e-139]} {Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [RH, Score=406, Expect=2e-136]} {Dmel: FBgn0028875, nAChRalpha5, nicotinic Acetylcholine Receptor alpha5, [RH, Score=495, Expect=4e-167]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [RH, Score=391, Expect=6e-131]} {Smed: dd_Smed_v6_12182_0_1, dd_Smed_v6_12182_0_1, [RH, Score=477, Expect=9e-164]} {RNA1509_19399, RNA1509_28588} {RNA1310_7616.1, RNA1509_19399, RNA1509_28588} {RNA1509_19399, RNA1509_28588, RNA815_3469.2} |
| 4. | MligTC455_34701 | 5732 | 119.42 | Mlig455_044421, Mlig455_044456, Mlig455_046748 | Neo: - Age: - |
ABAT | 1.685 | - | 0.733 | - | - | - | 0.952 | Mlig455_044421 {REF} {Length: 2235} {Pfam: Aminotransferase class-III [PF00202.23, score=330.6]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [RH, Score=497, Expect=5e-173]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [RH, Score=491, Expect=7e-171]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [RH, Score=461, Expect=2e-159]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [RH, Score=531, Expect=0.0]} {RNA1509_15533, RNA1509_4088, RNA1509_40896} {RNA1310_12178, RNA1509_4088, RNA1509_40896} {RNA1509_4088, RNA1509_40896, RNA815_4296} Mlig455_044456 {REF} {Length: 2252} {Pfam: Aminotransferase class-III [PF00202.23, score=332.7]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [RH, Score=498, Expect=5e-173]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [RH, Score=491, Expect=7e-171]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [RH, Score=532, Expect=0.0]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [RH, Score=461, Expect=1e-159]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [RH, Score=529, Expect=0.0]} {RNA1509_39024, RNA1509_58685} {RNA1310_12178, RNA1509_39024, RNA1509_58685} {RNA1509_39024, RNA1509_58685, RNA815_4296} Mlig455_046748 {REF} {Length: 2206} {Pfam: Aminotransferase class-III [PF00202.23, score=248.5]} {Human: ENSG00000183044, ABAT, 4-aminobutyrate aminotransferase, [Score=398, Expect=9e-136]} {Mouse: ENSMUSG00000057880, Abat, 4-aminobutyrate aminotransferase, [Score=397, Expect=2e-135]} {Dmel: FBgn0036927, Gabat, gamma-aminobutyric acid transaminase, [Score=426, Expect=5e-147]} {Celegans: WBGene00001794, gta-1, Probable 4-aminobutyrate aminotransferase, mitochondrial, [Score=389, Expect=5e-133]} {Smed: dd_Smed_v6_4367_0_1, dd_Smed_v6_4367_0_1, [Score=431, Expect=1e-149]} {RNA1509_15533, RNA1509_20161, RNA1509_39024} {RNA1310_12178, RNA1509_15533, RNA1509_20161} {RNA1509_15533, RNA1509_20161, RNA815_4296} |
| 5. | MligTC455_44210 | 1022 | 21.29 | Mlig455_026521 | Neo: - Age: - |
SYT1 | 1.679 | - | 0.729 | - | - | - | 0.950 | Mlig455_026521 {REF} {Length: 4253} {Pfam: C2 domain [PF00168.32, score=183.1]; CEP76 C2 domain [PF15627.8, score=21.2]} {Human: ENSG00000067715, SYT1, synaptotagmin 1, [RH, Score=424, Expect=1e-146]; ENSG00000143858, SYT2, synaptotagmin 2, [RH, Score=409, Expect=2e-140]} {Mouse: ENSMUSG00000035864, Syt1, synaptotagmin I, [RH, Score=422, Expect=6e-146]; ENSMUSG00000026452, Syt2, synaptotagmin II, [RH, Score=409, Expect=2e-140]} {Dmel: FBgn0004242, Syt1, Synaptotagmin 1, [RH, Score=509, Expect=3e-179]} {Celegans: WBGene00004921, snt-1, Synaptotagmin-1, [RH, Score=440, Expect=6e-153]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [RH, Score=567, Expect=0.0]} {RNA1509_20917, RNA1509_4420} {RNA1310_2560, RNA1509_20917, RNA1509_4420} {RNA1509_20917, RNA1509_4420, RNA815_2113.1} |
| 6. | MligTC455_52618 | 1337 | 27.86 | Mlig455_058836 | Neo: - Age: logFC(26M/2M)=-0.279 Region-enriched R7: 1.689/0.00009 |
CPEB3 | 0.974 | - | - | - | - | - | 0.974 | Mlig455_058836 {REF} {Length: 4908} {TRANSSPLICED} {Pfam: RNA recognition motif [PF16367.7, score=116.3]; Cytoplasmic polyadenylation element-binding protein ZZ domain [PF16366.7, score=73.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=43.6]} {Human: ENSG00000107864, CPEB3, cytoplasmic polyadenylation element binding protein 3, [RH, Score=485, Expect=5e-164]; ENSG00000283087, CPEB2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=485, Expect=6e-160]; ENSG00000137449, CPEB2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=485, Expect=6e-160]; ENSG00000113742, CPEB4, cytoplasmic polyadenylation element binding protein 4, [RH, Score=482, Expect=2e-162]} {Mouse: ENSMUSG00000039782, Cpeb2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=486, Expect=1e-160]; ENSMUSG00000111861, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [RH, Score=485, Expect=4e-164]; ENSMUSG00000039652, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [RH, Score=485, Expect=4e-164]; ENSMUSG00000020300, Cpeb4, cytoplasmic polyadenylation element binding protein 4, [RH, Score=483, Expect=2e-162]} {Dmel: FBgn0264307, orb2, [RH, Score=471, Expect=2e-158]} {Celegans: WBGene00000770, cpb-1, Cytoplasmic polyadenylation element-binding protein 1, [RH, Score=278, Expect=5e-86]} {Smed: dd_Smed_v6_8889_0_1, dd_Smed_v6_8889_0_1, [RH, Score=489, Expect=1e-170]} {RNA1509_11433} {RNA1310_8780, RNA1509_11433} {RNA1509_11433, RNA815_6808.1} |
| 7. | MligTC455_44131 | 2238 | 46.63 | Mlig455_008740, Mlig455_008756 | Neo: - Age: logFC(26M/2M)=0.231 |
BPHL | 0.963 | - | - | - | - | - | 0.963 | Mlig455_008740 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=74.8]; Alpha/beta hydrolase family [PF12697.9, score=61.2]; Serine aminopeptidase, S33 [PF12146.10, score=55.0]; TAP-like protein [PF08386.12, score=23.7]} {Human: ENSG00000137274, BPHL, biphenyl hydrolase like, [RH, Score=233, Expect=5e-76]} {Mouse: ENSMUSG00000038286, Bphl, biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen), [RH, Score=224, Expect=2e-72]} {Dmel: FBgn0038974, CG5377, [RH, Score=202, Expect=2e-64]} {Celegans: WBGene00019280, K01A2.5, [RH, Score=106, Expect=2e-27]} {RNA1509_36267} {RNA1310_32073} {RNA815_14961} Mlig455_008756 {REF} {Length: 1106} {TRANSSPLICED} {Pfam: alpha/beta hydrolase fold [PF00561.22, score=74.8]; Alpha/beta hydrolase family [PF12697.9, score=61.2]; Serine aminopeptidase, S33 [PF12146.10, score=55.0]; TAP-like protein [PF08386.12, score=23.7]} {Human: ENSG00000137274, BPHL, biphenyl hydrolase like, [RH, Score=233, Expect=5e-76]} {Mouse: ENSMUSG00000038286, Bphl, biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen), [RH, Score=224, Expect=2e-72]} {Dmel: FBgn0038974, CG5377, [RH, Score=202, Expect=2e-64]} {Celegans: WBGene00019280, K01A2.5, [RH, Score=106, Expect=2e-27]} {RNA1509_11876, RNA1509_17663, RNA1509_36267} {RNA1310_32073, RNA1509_11876, RNA1509_17663, RNA1509_36267} {RNA1509_11876, RNA1509_17663, RNA1509_36267, RNA815_14961} |
Berezikov Lab - 2020-2021 © ERIBA